| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,602,188 | T→C | 78.3% | I233I (ATT→ATC) | lsrA → | autoinducer 2 import ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,602,188 | 0 | T | C | 78.3% | 202.3 / 41.7 | 104 | I233I (ATT→ATC) | lsrA | autoinducer 2 import ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (11/11); new base C (34/45); total (47/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GCCGGAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATGCCGCCGGAAC > NC_000913/1602089‑1602286 | ccGGAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTc < 2:3011276/100‑1 (MQ=255) ggAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAg < 2:1804817/100‑1 (MQ=255) aactCGCCAGATTGCCGATCGAATTAGCGTGAGGCGCGACGGAACCATCGGCTTACGCGGTTCAGCCAGCGAACTGTCTATCGATGACATTATGCAGGcc < 2:593503/97‑1 (MQ=255) aaTTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGcc < 1:650339/100‑1 (MQ=255) cgccacacagCCGATCGAATTAGCGTGATGAGCGACGGAACCATCGCATTAATCGGCAAAACCAGCGAACTGTCTACCGACGACATTATGCAGGCCAt > 2:1284997/10‑98 (MQ=255) cGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCa < 1:2282529/100‑1 (MQ=255) cGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCa < 1:410092/100‑1 (MQ=255) cGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCa > 1:2076749/1‑100 (MQ=255) gCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCAc < 2:3168853/100‑1 (MQ=255) gCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCAc < 1:2598654/100‑1 (MQ=255) ccAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCAcc < 1:812536/100‑1 (MQ=255) cAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCAccc < 1:2219108/100‑1 (MQ=255) aGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCAcccc < 2:2016643/100‑1 (MQ=255) aGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCAcccc > 2:21440/1‑100 (MQ=255) gATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAACCCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCa < 2:224061/100‑1 (MQ=255) ttGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGc < 2:2149207/100‑1 (MQ=255) ttGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCACCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAg > 2:897782/1‑99 (MQ=255) tGCCGATTGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCg > 2:1646320/1‑100 (MQ=255) tGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCg < 1:2080563/100‑1 (MQ=255) tGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCg > 1:2080996/1‑100 (MQ=255) gCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCg > 2:2891221/1‑99 (MQ=255) gCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCgg > 2:918128/1‑100 (MQ=255) gCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCgg < 2:1882020/100‑1 (MQ=255) ccGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGt > 1:3837984/1‑100 (MQ=255) cGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTa > 2:466079/1‑100 (MQ=255) gctCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAACGCATCGAACTGTCTACCGACGACATTATTCACGCCATCACCCCAGCGGt < 2:2834487/96‑1 (MQ=255) gATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTAc > 1:1889437/1‑100 (MQ=255) aaTTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGaa > 2:4001476/1‑100 (MQ=255) aaTTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGaa < 1:3246082/100‑1 (MQ=255) aTTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGaaa < 1:2154940/100‑1 (MQ=255) ttAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGaaaa < 2:3419621/100‑1 (MQ=255) tAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGaaaaa > 1:3363967/1‑100 (MQ=255) aGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAAt > 1:2305304/1‑100 (MQ=255) gCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCTCCCCAGCGGTACGGGAAAAATc < 2:2418501/100‑1 (MQ=255) cGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCg > 1:1309398/1‑100 (MQ=255) gTGCTGCGCGACGGAACCATCGCCTTAAGCGGCAAACCCAGCGAACTGTCGACCGACGACATTATCCGGGCCATCACCCCAGCGGTACGGGAAAAATCGc < 1:1191736/100‑1 (MQ=255) gTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGc > 2:2884323/1‑100 (MQ=255) tGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACAGGAAAAAtacct > 2:2535430/1‑96 (MQ=255) gATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGctc < 1:881678/100‑1 (MQ=255) tGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGctctc < 2:921165/100‑1 (MQ=255) cgtgACGGAACCATCGCCGTAATCGGCAAAACTAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGTAAAAATCGctctct > 2:1869216/4‑99 (MQ=255) aCGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTgccag < 1:1504464/100‑1 (MQ=255) aaCCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCaa > 1:406472/1‑100 (MQ=255) aCCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCaaa < 1:1808085/100‑1 (MQ=255) aTCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAAt > 1:1508141/1‑100 (MQ=255) aTCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAAt > 1:2893231/1‑100 (MQ=255) cGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTa < 1:2646164/100‑1 (MQ=255) gCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCCAAAATTAt > 1:2256994/1‑100 (MQ=255) gCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTAt < 2:3134500/100‑1 (MQ=255) gCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTAt > 2:3542502/1‑100 (MQ=255) ccTTAAGCGGCAAAACCAGCGAACTGTCTACCGAAGACATTATCCAGGTCATCACCCAAACAATAAGAGAAAAATCGCTCTCTGCCAGCCAAAAATTAt < 2:3549709/99‑1 (MQ=255) ttAAGCGGCAAAGCCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCAAGCCAAAAATTATGGc < 2:1674180/100‑1 (MQ=255) ttAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGc < 2:3233930/100‑1 (MQ=255) ttAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGc < 1:2792498/100‑1 (MQ=255) tAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCt < 2:972313/100‑1 (MQ=255) aaGCGGCAAAACCAGCGATCTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTg < 2:2946042/100‑1 (MQ=255) aaGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTg > 1:1554062/1‑100 (MQ=255) aGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTgg > 2:2041083/1‑100 (MQ=255) aGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTgg < 1:2570816/100‑1 (MQ=255) aGCGGAAAAACCAGCGAACTGTCTAACGAAGACATTATTCAGGCCATCACCCCAGAAAAAAAGAAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCt < 2:972471/98‑1 (MQ=255) gCGGTAAAACCCGCGAACGGTGTACCGACGACAGTATCCAGGCCAGCGCCCCAGCGGTACGGGAAAAATCGCTCTCGGCCAGCCATAATTTTTGGCTggc < 2:1632650/100‑2 (MQ=255) gCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCGGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCATAATTTTTGGCTggc < 1:963528/100‑2 (MQ=255) gCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCATAATTTTTGGCTggc < 1:1582448/100‑2 (MQ=255) gCGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCCCTCTGCCAGCCAAAAATTATGGCTGGa > 1:1155732/1‑100 (MQ=255) cGGCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAg < 1:4579/100‑1 (MQ=255) ggCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGt > 2:1613823/1‑100 (MQ=255) ggCAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGa > 2:3729419/1‑98 (MQ=255) gCAAAACCAGCGAACTGTCTACCGACGACATTATCCATGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGtt < 2:1041891/100‑1 (MQ=255) cAAAACCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCATAATTTTTGGCTggcagag < 1:2844728/100‑6 (MQ=38) cAAAACCAGCGAACTGTCTACCGACGACATGATGCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATCGCTGGAGTTa > 2:2740111/1‑100 (MQ=255) aaaCCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTAcc > 1:1589743/1‑100 (MQ=255) aaCCAGCGAACTGTCTCCCGACGACATTATCCAGCCCATCACCCCAGCGGTACCGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTAcc < 1:2921017/99‑1 (MQ=255) aaCCAGCGAACTGTCTACCGACGACATTATCTAGGCCATCACCCCAGCGGTACGGGAATAATCGCTCACTGCCAGCCAAAAATTATGGCTGGAGTTAACt > 2:2888257/1‑100 (MQ=255) aaCCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTAcc < 2:1836482/99‑1 (MQ=255) aaCCAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCt < 2:1601020/100‑1 (MQ=255) ccAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTgg > 2:306290/1‑100 (MQ=255) ccAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTg < 1:1001453/99‑1 (MQ=255) cAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGt > 1:2009227/1‑100 (MQ=255) cAGCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGt < 1:2093520/100‑1 (MQ=255) gCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAACAATTATGGCTGGAGTTACCTGGTaa > 2:1549695/1‑100 (MQ=255) gCGAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTaa > 1:1373894/1‑100 (MQ=255) gAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAAcc > 2:2204297/1‑100 (MQ=255) gAACTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAAcc < 2:3110665/100‑1 (MQ=255) gAACTGTCTACCGACGACATTATCAAGGCCATAAACACAGGGGTACGGGAAAAATCGAAAAAAAAAAAAAAAAAATTATGGCTGGAGTTACCTGGTaa < 2:2037209/98‑1 (MQ=255) cTGTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGcc > 1:950460/1‑100 (MQ=255) gTCTACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCca < 1:306293/100‑1 (MQ=255) tACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCacaa < 2:1300896/100‑1 (MQ=255) tACCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCacaa > 1:254902/1‑100 (MQ=255) aCCGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCacaac < 1:1732549/100‑1 (MQ=255) ccGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCacaaca < 1:2041093/100‑1 (MQ=255) ccGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACAGCCCacaac < 2:3095613/99‑1 (MQ=255) ccGACGACATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCacaaca > 2:2254804/1‑100 (MQ=255) gacgacATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATg < 1:3209899/100‑1 (MQ=255) gacgacATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATg > 2:833109/1‑100 (MQ=255) gacgacATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATg > 1:1653878/1‑100 (MQ=255) gacgacATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCGCTCAGCAAGCCAAAAAGTATGGCTGGAGTTACCTGGTACCCGCCAAAAACAt > 2:3201601/1‑99 (MQ=255) cgacATTATCCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATgcc > 1:322274/1‑100 (MQ=255) acATTATTCAGACCCTCACCACACGGGTACAACAAACTTCGCTCTCTCACAGCCAATAATTATGGCTGGAGTTATCTGTTAACCGCCCAAAACATgccgc < 2:661145/100‑1 (MQ=255) nattatcCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATgccgcc > 1:1119107/2‑100 (MQ=255) ttCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACGGCCCACAACATGCCGCCGGAAc > 2:1760658/1‑100 (MQ=255) | GCCGGAAATTCGCCAGATTGCCGATCGAATTAGCGTGATGCGCGACGGAACCATCGCCTTAAGCGGCAAAACCAGCGAACTGTCTACCGACGACATTATTCAGGCCATCACCCCAGCGGTACGGGAAAAATCGCTCTCTGCCAGCCAAAAATTATGGCTGGAGTTACCTGGTAACCGCCCACAACATGCCGCCGGAAC > NC_000913/1602089‑1602286 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |