| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,652,242 | T→G | 83.0% | pseudogene (692/1158 nt) | intQ → | pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,652,242 | 0 | T | G | 83.0% | 314.1 / 46.2 | 122 | pseudogene (692/1158 nt) | intQ | pseudogene, Qin prophage; phage integrase family;Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base T (8/13); new base G (58/43); total (66/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
GGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGA > NC_000913/1652143‑1652338 | gggAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGt < 1:2878265/100‑1 (MQ=255)gggAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGt < 2:3992950/100‑1 (MQ=255) ggaggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGtc > 1:3918516/1‑100 (MQ=255) aggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGtcat > 2:2099334/1‑100 (MQ=255) aggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcat < 2:472646/100‑1 (MQ=255) ggaCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcatt > 1:1032239/1‑100 (MQ=255) aCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcattca < 1:661202/100‑1 (MQ=255) aCATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcattca < 1:1034638/100‑1 (MQ=255) cATAGATCTGAAAAATGGAACAATGATGCTCAGGAGAAATTTAGCAAAAGACAGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgaattca > 2:1763354/1‑99 (MQ=255) cATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGtcattcat > 1:1898409/1‑100 (MQ=255) cATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcattcat > 2:56766/1‑100 (MQ=255) aTAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGgcattca < 1:1891482/98‑1 (MQ=255) aTAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATc < 1:2626900/100‑1 (MQ=255) aTAAATCTAAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATc < 2:22627/100‑1 (MQ=255) tAGATCTGCAAAATGGAACAATGATGATCAGAAAAAATTTAACAAAAGATCGATTAAAGAAAACAAAAAAATAGACGTGAATCAATAGGTtcattc > 2:783709/1‑96 (MQ=255) tAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCt > 1:1917360/1‑100 (MQ=255) tAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCt < 1:3360927/100‑1 (MQ=255) naGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCt > 1:688523/2‑100 (MQ=255) gATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCtta > 2:4009474/1‑100 (MQ=255) aTCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttat > 2:3083913/1‑100 (MQ=255) aTCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttan < 1:1495096/100‑2 (MQ=255) aTCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAAAACAGGCGGGAACCAATCGGGGCATTCATCttat < 2:926591/100‑1 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCttatt > 1:4043171/1‑100 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttatt > 2:1217282/1‑100 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttatt > 1:988176/1‑100 (MQ=255) tCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACC‑AAAACACAGGCGGGAACCAATCGGGGCATTCATCttatta > 1:311740/1‑100 (MQ=255) ntGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAGGACCGTTTCACGGTACCAATAACACAGGCGGGAACCAATCGGGTCATTCATCttatta > 2:2268919/2‑100 (MQ=255) cTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttatta < 1:1900752/100‑1 (MQ=255) cTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttatta > 1:1947224/1‑100 (MQ=255) tGAGAAATGGAACAATGATGATGAGGAGAAATTGAACAAAAAACCGTTTTACGTTATCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCttat < 2:1100583/97‑1 (MQ=255) gAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAg > 1:1871206/1‑100 (MQ=255) aaaaTGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGcc > 1:4026835/1‑100 (MQ=255) aaaaTGGAACAATGATGATCAGGAAAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGcc < 2:1396396/100‑1 (MQ=255) aaaTGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCa > 2:2948685/1‑100 (MQ=255) aaTGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCACTCGGGGCATTCATCTTATTAAGCCAg > 2:2667825/1‑100 (MQ=255) aaTGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAg < 1:1937604/100‑1 (MQ=255) ggAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCaa > 2:4093472/1‑100 (MQ=255) gAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAAt < 1:3332078/100‑1 (MQ=255) aaCACTGAGGATCAGGACAAATTTAGCAAGAGACAGATTCACGGTACCAAAAACACACGCGGTAACCCTTTGGGGCATTGATCTTATTAATCCAGCACTc > 2:1135864/1‑100 (MQ=255) aaCAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATc < 2:3425623/100‑1 (MQ=255) aCAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACATGCGGGAACCAATCTGGGCATTCATCTTATTAAGCCAGCAATCg > 2:1025950/1‑100 (MQ=255) cAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGAGCATTCATCTTATTAAGCCAGCAATcaa > 2:2523270/1‑98 (MQ=255) aaTGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGAc < 1:2362041/100‑1 (MQ=255) tgatgaTCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGc > 2:3652635/1‑100 (MQ=255) tgatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGctct > 1:1250698/1‑100 (MQ=255) tgatCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGctct > 2:321927/1‑100 (MQ=255) gatCAGGAGAAATTTAGCAAAATACCGTTTCACGGTACCAAAAACACCGGCGGGAACCAATCGTGGCTTTCACCTTATTAAGCCAGCATTCGACGctc > 2:3490024/1‑98 (MQ=255) gatCAGGAGAAATTTAGCAAAAGACCGTTTCACTGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCtctc < 2:1411253/100‑1 (MQ=255) atCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTcc > 2:2503815/1‑100 (MQ=255) aGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGa > 1:764363/1‑100 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAg < 2:1897352/100‑1 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAg > 2:396653/1‑100 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAg < 1:1027700/100‑1 (MQ=255) ggAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAg < 1:181761/100‑1 (MQ=255) gagaAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGt < 1:4147839/100‑1 (MQ=255) agaAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTc > 2:1779592/1‑100 (MQ=255) aaaTTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAg < 2:3301715/100‑1 (MQ=255) aTTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGAt < 1:1755306/100‑1 (MQ=255) tttAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATg < 1:3245668/100‑1 (MQ=255) aGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACa > 1:537266/1‑100 (MQ=255) gCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACAt > 1:864903/1‑100 (MQ=255) cAAAAAGCCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGAc < 2:2571064/97‑1 (MQ=255) aGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACg < 1:3724602/100‑1 (MQ=255) ccGTTTCACGGTACCAAAAACACAGGCCGGAACCAATCGGGGCATTCATCTTATTAAGCCAGTAATCGACGCTCTCCGGAGTCAGATGACATTAACga < 2:3564124/98‑1 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGAc < 1:2760979/100‑1 (MQ=255) cGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGAc < 2:134805/100‑1 (MQ=255) ttCATGGTACCAAAAACACAGGCGGGTACCAATCGGGGCATTCATCATCTTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACAATAACGAGCCTGa > 2:2386961/1‑100 (MQ=255) tCACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAg < 1:972852/100‑1 (MQ=255) cACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGc > 1:2067456/1‑100 (MQ=255) cACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGc > 1:387079/1‑100 (MQ=255) cACGGTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTACGGAGACAGATGAGATTAACGGGACTgcg > 1:3469075/1‑97 (MQ=255) aCGGTACGAAAAACACAGGCGGGAACCAATCGGGGCATTCAGCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCa < 2:3312541/100‑1 (MQ=255) aCGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCa < 1:698692/100‑1 (MQ=255) ggTACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCaaa < 2:1917350/100‑1 (MQ=255) tACCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGGCTGAGCAAaga < 2:1757880/100‑1 (MQ=255) aCCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGCCACTGAGCaacgcg > 1:2424651/1‑96 (MQ=255) aCCAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAagag < 1:2583508/100‑1 (MQ=255) ccAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGc > 1:1039045/1‑100 (MQ=255) ccAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGGCAGATGACATTAACGAGACTGAGCAAAGAGc > 2:46447/1‑100 (MQ=255) cAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCa > 1:4047182/1‑100 (MQ=255) cAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCa > 1:3594240/1‑100 (MQ=255) cAAAAACACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCa > 2:3743189/1‑100 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCat > 1:3067552/1‑100 (MQ=255) aaaaaCACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGCCAGATGACATGAACGAGACCGAGCAAAGAGc > 2:9400/1‑98 (MQ=255) aaaaCACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCata < 1:210798/100‑1 (MQ=255) aaaCACAGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCatat < 2:298218/100‑1 (MQ=255) caGGCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATAACATTAACGAGACTGAGCAAAGAGCATATCATTg > 2:536565/1‑100 (MQ=255) ggCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGAt < 1:778528/100‑1 (MQ=255) gcaggAACCAATCGTGTCATTCATCTTATTAATCCAGCAATCTACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATg < 2:2724075/97‑1 (MQ=255) gCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATg < 1:702833/100‑1 (MQ=255) gCGGGAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATg < 1:3128394/100‑1 (MQ=255) gAACCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCa < 1:172294/100‑1 (MQ=255) aaCCAATCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCAc > 2:2059839/1‑100 (MQ=255) aaTCGGGGCATTCATGGTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACCTTAACGAGACTGAGCACAAAGCATATCAGTGATGTTCACTTCa > 2:4074198/1‑100 (MQ=255) aaTCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCa > 1:1254390/1‑100 (MQ=255) aaTCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCa > 1:1081694/1‑100 (MQ=255) aTCGGGGCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCag < 2:1311514/100‑1 (MQ=255) tCGGGGCATTCATCTTATTAAGCCAGCAATCGACGACCTCCGGAGTCAGATGACATTAGCGAGACTGAGCAAAGAGCTTATCATTGAGGTTCACTTgaga < 2:2424636/100‑1 (MQ=255) ggggCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCcgaga > 2:2340499/1‑100 (MQ=255) ggggCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCagaga > 2:3016720/1‑100 (MQ=255) | GGGAGGACATAGATCTGAAAAATGGAACAATGATGATCAGGAGAAATTTAGCAAAAGACCGTTTCACGGTACCAAAAACACAGGCGGGAACCAATCGGGTCATTCATCTTATTAAGCCAGCAATCGACGCTCTCCGGAGTCAGATGACATTAACGAGACTGAGCAAAGAGCATATCATTGATGTTCACTTCAGAGA > NC_000913/1652143‑1652338 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |