| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,806,158 | T→C | 73.8% | intergenic (‑75/‑212) | ydiY ← / → pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,806,158 | 0 | T | C | 73.8% | 229.7 / 76.6 | 140 | intergenic (‑75/‑212) | ydiY/pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| Reads supporting (aligned to +/- strand): ref base T (20/16); new base C (54/47); total (74/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
ACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTT > NC_000913/1806064‑1806253 | aCTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTg < 2:3148323/100‑1 (MQ=255) gTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGaa > 2:4082377/1‑100 (MQ=255) gTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTg > 2:1089402/1‑97 (MQ=255) tCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGAGGTCCCGGAAACTTTCATAAGGACCAAAGATTAGCGTCCCTGGaaa > 2:3400779/1‑100 (MQ=255) cTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAg > 2:348042/1‑100 (MQ=255) cTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAg < 1:1904604/100‑1 (MQ=255) cTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAg > 1:296758/1‑100 (MQ=255) ttCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAgg < 2:2034123/100‑1 (MQ=255) tCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGt > 2:3486551/1‑100 (MQ=255) tCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGt > 2:1394471/1‑100 (MQ=255) tCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGt > 1:2954422/1‑100 (MQ=255) cAAAAGCTTCATTTATCAAGGGTCCGTACAACAAAAAAAGAGACCATCGCGGTCACGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTa > 2:4086362/1‑100 (MQ=255) cAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTa < 1:1789647/100‑1 (MQ=255) aaaGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAAc > 1:3948844/1‑100 (MQ=255) aaaGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAAc > 1:2141329/1‑100 (MQ=255) aaGCTTCATTTATCAAGAGTCCGTAAAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACg < 2:3232570/100‑1 (MQ=255) gCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGaa > 1:2255675/1‑100 (MQ=255) cTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAAt > 2:2096774/1‑100 (MQ=255) tCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCGTCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATta > 2:2221515/1‑100 (MQ=255) cATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATtat > 2:169231/1‑100 (MQ=255) cATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATtat < 1:4141934/100‑1 (MQ=255) aTTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCACGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATtata > 1:1221426/1‑100 (MQ=255) tttATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATaa > 1:3199718/1‑100 (MQ=255) aTCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATaaaaa > 2:1648032/1‑100 (MQ=255) aTCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATaaaaa < 2:205169/100‑1 (MQ=255) aTCAAGAGACAGAACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaaaaa < 1:1033826/100‑1 (MQ=255) tCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAg > 1:3823629/1‑100 (MQ=255) cAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAgg > 2:698375/1‑100 (MQ=255) cAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAgg > 2:2627800/1‑100 (MQ=255) aaGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGgc > 1:2442514/1‑100 (MQ=255) gagTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGgcgc > 1:2066287/1‑100 (MQ=255) agTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGcgcg < 2:619056/100‑1 (MQ=255) gTCCGTACAACAAAAAAAGAGACCAGCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTCTAAAAAGGcgcg < 1:2997091/99‑1 (MQ=255) tCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGaa < 1:2387566/100‑1 (MQ=255) cGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa < 1:3826724/100‑1 (MQ=255) tACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAAc > 2:2453415/1‑100 (MQ=255) acaacaAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCACTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACt < 2:1523754/100‑1 (MQ=255) acaacaAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACt > 2:1622532/1‑100 (MQ=255) aacaacAAAAGAGA‑CATCGCGGTCCCGGAAACTATCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAg < 2:2869206/100‑1 (MQ=255) aacaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACtt < 2:1165818/99‑1 (MQ=255) acaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAg > 2:148507/1‑100 (MQ=255) acaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAg > 2:412919/1‑100 (MQ=255) acaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGAGAATAACTTAg > 2:2477354/1‑100 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc < 1:392877/100‑1 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc > 1:2250590/1‑100 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc > 2:3436956/1‑100 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc < 1:1642449/100‑1 (MQ=255) aaaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCaa > 1:1240901/1‑100 (MQ=255) aaaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCaa < 1:3378617/100‑1 (MQ=255) aaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAAt > 2:3580202/1‑100 (MQ=255) aaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATg < 2:3684866/100‑1 (MQ=255) agagACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTAt < 2:3679075/100‑1 (MQ=255) gagaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTAtt < 1:2610744/100‑1 (MQ=255) agaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTc < 1:4114877/100‑1 (MQ=255) gaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCt > 1:3298488/1‑100 (MQ=255) gaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCt < 2:2822863/100‑1 (MQ=255) aCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCtt > 1:3668751/1‑100 (MQ=255) ccATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTa > 1:1473891/1‑100 (MQ=255) ccATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTa < 2:2250576/100‑1 (MQ=255) ccATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTa > 1:1688599/1‑100 (MQ=255) cATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTa < 2:3854476/99‑1 (MQ=255) cATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTAt > 2:1600484/1‑100 (MQ=255) tCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTAttt > 1:1378743/1‑100 (MQ=255) gcgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCa > 2:3073123/1‑100 (MQ=255) cgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAt < 2:720389/100‑1 (MQ=255) gTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttt < 1:2435101/100‑1 (MQ=255) tCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAtttt < 1:2627815/100‑1 (MQ=255) cccGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttttt > 1:3232766/1‑100 (MQ=255) cccGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttttt > 1:1396310/1‑100 (MQ=255) cccGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttttt > 1:3359045/1‑100 (MQ=255) cccGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttttt > 1:3871590/1‑100 (MQ=255) cGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTg < 2:513360/100‑1 (MQ=255) cGGAAACTTGCTTAAGGATCAAAGATTAGCGCCCCTGGAGAGTTAACGAATTATAAAAAGGCTCGAATCACTTAGGGATGTATTCTTATTTCAtctat < 2:2862322/98‑5 (MQ=255) ggAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGa > 2:1145907/1‑100 (MQ=255) gAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGaa < 2:3992788/100‑1 (MQ=255) aaaCTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGTGAATAACTTAGCAATGTATTCTTATTTCAGTTTTTGAAt < 2:2522125/100‑1 (MQ=255) aaaCTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAAt < 2:3948209/100‑1 (MQ=255) aaaCTTACTTAAATATCGAAAATTAGCGTGCCTAGCAAGGTAAAGAATTATAAATCGTCGCGAAGCACTTTGCAATGGATATGTATTTCATTTTTTg < 2:3846754/97‑1 (MQ=255) cagtCTTACGGATCAAACACTCGCGTCCCTGGCAAGGTAACGAATTATAAAAAGGCGCGCCTAACTTAGCAATGTATTCTTATTACAattttttcat > 2:127812/4‑93 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAg > 2:4004924/1‑100 (MQ=255) ttCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCa < 2:3237559/100‑1 (MQ=255) ttCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCa < 1:1394479/100‑1 (MQ=255) tCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAAATTAGCAATGTATTCTTATTTCATTTTTTGAATAATCAt > 2:2304783/1‑100 (MQ=255) ctgaaGGATCAAAGATGAGCGGCCCTGGAAATGTTATGAATTTTAAAAAGGCTTGAATAACTGAGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtg < 2:1214732/97‑1 (MQ=255) tAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtgtg > 2:3158249/1‑100 (MQ=255) tAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtgtg < 1:2061800/100‑1 (MQ=255) tAACGAACAAAGATAAGCGTCCCTGGAACGGTAACGAATTATAGAAAGGCGCGAACAACTTCGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtgt > 2:342171/1‑99 (MQ=255) aaGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTgg > 2:1074201/1‑100 (MQ=255) ggATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCg < 2:1221921/100‑1 (MQ=255) gATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGa > 1:1935310/1‑100 (MQ=255) aTCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGaa > 2:196177/1‑100 (MQ=255) tCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGaaa < 1:1557964/100‑1 (MQ=255) cAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGaaaa > 1:3776501/1‑100 (MQ=255) gATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGa > 2:2353216/1‑100 (MQ=255) aTTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGAt > 2:1814874/1‑100 (MQ=255) ttAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGAtt < 1:1087013/100‑1 (MQ=255) ttAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGAtt < 1:1087000/100‑1 (MQ=255) aGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGAtttt < 2:1886824/100‑1 (MQ=255) aGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGAtttt > 1:716464/1‑100 (MQ=255) aGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATCTGGCGAAAACAGAtttt > 2:1133781/1‑100 (MQ=255) | ACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTT > NC_000913/1806064‑1806253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |