| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,913,273 | T→C | 77.3% | N515S (AAC→AGC) | prc ← | carboxy‑terminal protease for penicillin‑binding protein 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,913,273 | 0 | T | C | 77.3% | 283.6 / 73.2 | 146 | N515S (AAC→AGC) | prc | carboxy‑terminal protease for penicillin‑binding protein 3 |
| Reads supporting (aligned to +/- strand): ref base T (12/21); new base C (50/62); total (63/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
CGCGTTATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTAT > NC_000913/1913176‑1913371 | cgcgTTATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTa < 2:4088981/100‑1 (MQ=255) cgTTATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAc > 2:3625436/1‑100 (MQ=255) gTTATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGTATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAcg < 2:754833/100‑1 (MQ=255) ttATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAAcgc < 2:351107/100‑1 (MQ=255) ttATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAcgn < 2:2152838/100‑2 (MQ=255) ttATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAcgc < 1:2612809/100‑1 (MQ=255) ttATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAcgc < 1:826162/100‑1 (MQ=255) ttATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGCCGTTACGCCTTTACGTTGCGTACTCCCGCCGCTAAcgc < 2:2567296/100‑1 (MQ=255) tcttCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAAcac < 1:2815923/97‑3 (MQ=255) tATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAAcgcg < 2:474418/100‑1 (MQ=255) tATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAAcgcg < 1:47395/100‑1 (MQ=255) ntCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGa > 1:2232120/2‑100 (MQ=255) tCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAAcgcaga > 2:2815907/1‑97 (MQ=255) tCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGAt < 1:2400207/100‑1 (MQ=255) cTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGCTGATGTCTGGCGTTACGCCTTTACGTTGCTTACTGCTTCCGTTAACGCGa > 2:871757/1‑98 (MQ=255) ttCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTACCGCGATAg > 2:1244944/1‑100 (MQ=255) ttCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAg < 1:177396/100‑1 (MQ=255) tCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCATCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGa > 1:2945764/1‑100 (MQ=255) gAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAAt > 1:1101023/1‑100 (MQ=255) aaTTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAAt < 1:2352448/99‑1 (MQ=255) tctcACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTg < 2:2395318/100‑1 (MQ=255) tctcACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTg < 1:863262/100‑1 (MQ=255) ctcACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTgg > 2:672977/1‑100 (MQ=255) ctcACCCGTTTCCGCTTCTTCATTACCCGTCGGCATGATGATGTCTTGCGTTACACCTTTACGTTGCGTACTGCCGCCGGGAACGCGATAGAATTTCTgg > 2:4158863/1‑100 (MQ=255) cACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGAt < 1:1782534/100‑1 (MQ=255) cACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGAt < 1:1002586/100‑1 (MQ=255) cACCCGTTTCCGTTTCTTCATTACCCGTAGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCAGCTGACGCGATACAATTTCt > 2:309660/1‑96 (MQ=255) aCCCGTTTCCTTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTGCTGCCGCCGCTAACGCGATAGAATTTCTGGATc < 2:2735827/100‑1 (MQ=255) aCCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATc < 1:1732273/100‑1 (MQ=255) cccGTTTCCGTTTCTTCATTACCCGTCTGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCg < 2:1353739/100‑1 (MQ=255) cccGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCg < 1:2338526/100‑1 (MQ=255) cccGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCg > 1:2912567/1‑100 (MQ=255) cccGTTTCCGTTTCTGCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTATTGCCGCCGCTAACGCGATAGAATTTCTGGATCg < 1:4114465/100‑1 (MQ=255) cgtttccgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCgtg < 2:1985351/100‑1 (MQ=255) gtttccgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCgtgt > 1:4003730/1‑100 (MQ=255) tttccgtttcTTCATTTCCCGTCTGCATGTTTATTTCTTGCTTTACGCCTTTACGTTGCTTACTTCCGCCGCTTATGCGATAGAATTTCTGGCTct < 2:2787177/96‑2 (MQ=255) ttccgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTAc < 2:4095453/100‑1 (MQ=255) ttccgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTAc > 2:4146048/1‑100 (MQ=255) cgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGc > 1:3320977/1‑100 (MQ=255) cgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGc > 1:1504376/1‑100 (MQ=255) cgtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGc > 1:1503033/1‑100 (MQ=255) gtttcTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGca < 1:1337987/100‑1 (MQ=255) ttcttcATTACCCGTCTGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCTGCTAACGCGATAGAATTTCTGGATCGTGTACTGcac < 2:2876540/99‑1 (MQ=255) ttcttcATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGcacc < 2:3960285/100‑2 (MQ=255) ttcttcATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGcaca > 1:3934872/1‑100 (MQ=255) ttcttcATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGcaca > 1:2313872/1‑100 (MQ=255) cttcATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGa > 1:494321/1‑100 (MQ=255) tcATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTAATGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGGAc > 1:2861327/1‑100 (MQ=255) cATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAAcc < 1:992559/100‑1 (MQ=255) tACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAg < 2:3678491/100‑1 (MQ=255) aCCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAgc > 1:3813927/1‑100 (MQ=255) tCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTgg < 2:2118684/100‑1 (MQ=255) cGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGc < 2:579787/100‑1 (MQ=255) cGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGc < 1:3790389/100‑1 (MQ=255) cGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGCTCGTGTACTGCACAGAACCCAGCGCTGGc > 1:2011610/1‑100 (MQ=255) cGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGc < 1:110750/100‑1 (MQ=255) ggCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGcc > 1:905698/1‑100 (MQ=255) gCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGGAATTTTGGATCGTGTACTGGACAGAACACAGCGCTGGACa > 2:3124980/1‑100 (MQ=255) tgatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTc < 2:3015175/100‑1 (MQ=255) tgatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTc < 2:1617700/100‑1 (MQ=255) tgatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTc < 1:2384387/100‑1 (MQ=255) tgatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTc < 2:1737438/100‑1 (MQ=255) gatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCa < 2:1534146/100‑1 (MQ=255) gatgatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCa > 1:2512156/1‑100 (MQ=255) gatgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCa < 1:3857755/97‑1 (MQ=255) tgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACg < 1:3490120/100‑1 (MQ=255) tgTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATACAGGACg < 1:2191025/100‑1 (MQ=255) tCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTa > 2:3515208/1‑100 (MQ=255) tagCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAAc > 1:2811557/3‑100 (MQ=255) tGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAAc < 2:1896333/100‑1 (MQ=255) cGTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATc > 1:664260/1‑100 (MQ=255) gTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCt > 1:3176598/1‑100 (MQ=255) gTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCt > 2:2606277/1‑100 (MQ=255) gTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCt < 1:3831543/100‑1 (MQ=255) gTTACGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCt < 1:1188894/100‑1 (MQ=255) aCGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGAt < 1:2649491/100‑1 (MQ=255) aCGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGAt > 1:407749/1‑100 (MQ=255) aCGCCGTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGAt < 2:863997/100‑1 (MQ=255) cGCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATc < 2:2110589/100‑1 (MQ=255) gCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCg < 2:2445149/100‑1 (MQ=255) gCCTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCg < 1:2525031/100‑1 (MQ=255) ccTTTACGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGt > 2:1920820/1‑100 (MQ=255) aCGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATa > 2:3146269/1‑100 (MQ=255) cGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATAc < 1:1852777/100‑1 (MQ=255) cGTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATAc < 1:3204930/100‑1 (MQ=255) gTTGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACg < 1:3529791/100‑1 (MQ=255) ttGCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACgg < 1:998656/100‑1 (MQ=255) tGCGTACTGCCGCTGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACACAACCCAGCGATGGCCATTCAGGACGTAACATCTGATCGTAAATACGGt < 2:2059919/100‑1 (MQ=255) gCGTACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGtt > 1:2237837/1‑100 (MQ=255) tACTGCCGCCGCTAACGCGATAGACTTTCTGGATCGTGTACCGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCCTAAACACgggt > 2:3075531/1‑95 (MQ=255) tACTGCCGCCGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCaa < 2:3690878/100‑1 (MQ=255) aCTGCGGCCGCTAACGCGCTAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAAt < 2:1927042/100‑1 (MQ=255) gccgccGCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGaa > 2:2174663/1‑100 (MQ=255) cgccgcTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACg > 1:3328326/1‑100 (MQ=255) gccgCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACgg < 2:321285/100‑1 (MQ=255) gccgCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACgg < 1:625197/100‑1 (MQ=255) gccgCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACgg > 1:1736900/1‑100 (MQ=255) gccgCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACg < 2:3738829/99‑1 (MQ=255) gccgCTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACg > 2:3540297/1‑99 (MQ=255) gTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTAt < 2:3217783/100‑1 (MQ=255) | CGCGTTATCTTCGAATTTCTCACCCGTTTCCGTTTCTTCATTACCCGTCGGCATGATGATGTCTGGCGTTACGCCTTTACGTTGCGTACTGCCGCCGTTAACGCGATAGAATTTCTGGATCGTGTACTGCACAGAACCCAGCGCTGGCCATTCAGGACGTAACATCTGATCGTAAATACGGTTCAATGAACGGTAT > NC_000913/1913176‑1913371 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |