| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,014,867 | A→G | 79.1% | I547V (ATA→GTA) | fliF → | flagellar basal‑body MS‑ring and collar protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,014,867 | 0 | A | G | 79.1% | 226.3 / 49.4 | 110 | I547V (ATA→GTA) | fliF | flagellar basal‑body MS‑ring and collar protein |
| Reads supporting (aligned to +/- strand): ref base A (12/11); new base G (38/48); total (50/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
CGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCACC > NC_000913/2014770‑2014964 | cgcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGgta < 1:3405149/100‑1 (MQ=255) gcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGataa > 1:3267909/1‑100 (MQ=255) cTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGgtaaa > 2:29691/1‑100 (MQ=255) aCGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGAt < 1:3702015/100‑1 (MQ=255) cGTCTGGGGGCAAAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATc < 1:1448898/100‑1 (MQ=255) gTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATc < 1:3617637/99‑1 (MQ=255) gTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCa > 1:3490315/1‑100 (MQ=255) gTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCa < 2:3269676/100‑1 (MQ=255) gTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCa > 1:627874/1‑100 (MQ=255) tCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCAt > 2:4166206/1‑100 (MQ=255) cTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATg > 2:2094402/1‑100 (MQ=255) cTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATg < 2:289152/100‑1 (MQ=255) cTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATg < 1:2675955/100‑1 (MQ=255) tGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGa < 2:3641809/100‑1 (MQ=255) tGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGa < 1:629878/100‑1 (MQ=255) tGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGa > 2:208698/1‑100 (MQ=255) tGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGa > 1:3232151/1‑100 (MQ=255) tGGGAGCATAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCTCTGGTCATTCGCCAGTGGTTAAATAACTATCATg < 2:4126022/99‑1 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAg < 2:741237/100‑1 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAg < 1:1951944/100‑1 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAg < 1:3383102/100‑1 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGACTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAg > 2:2224528/1‑100 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGAGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGATCATTCGCCAGTGGGTAAATAACGATCATGAg < 2:4157650/100‑1 (MQ=255) ggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGt > 2:901013/1‑100 (MQ=255) gggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTa > 1:3633837/1‑100 (MQ=255) cAGGAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAAcc < 2:2200020/100‑1 (MQ=255) cAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAAcc > 2:2112519/1‑100 (MQ=255) aGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAAcc < 2:3575889/99‑1 (MQ=255) gAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTg < 1:1569174/100‑1 (MQ=255) gAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTg > 1:1551760/1‑100 (MQ=255) aGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATTATGAGTAACCt > 2:4041266/1‑97 (MQ=255) aGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGAc < 2:3232130/100‑1 (MQ=255) gTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACa < 1:702981/100‑1 (MQ=255) gTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACa > 2:2773169/1‑100 (MQ=255) gTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGGCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACa < 1:427683/100‑1 (MQ=255) tCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAg < 2:3848604/100‑1 (MQ=255) cATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAgg > 2:885898/1‑100 (MQ=255) tGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCa < 1:1389274/100‑1 (MQ=255) aGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCAcc < 2:30142/100‑1 (MQ=255) aGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCAcc < 1:240495/100‑1 (MQ=255) gCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCg < 2:773186/100‑1 (MQ=255) cAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGAt < 1:678947/100‑1 (MQ=255) cAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCAAt < 2:3527529/100‑1 (MQ=255) aGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATa < 1:3128294/100‑1 (MQ=255) gCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATaa < 1:1063278/100‑1 (MQ=255) gCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATaa < 2:1051640/100‑1 (MQ=255) cGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATaaa < 1:1599875/100‑1 (MQ=255) tCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCg < 2:3439710/100‑1 (MQ=255) tCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCg < 1:2326224/100‑1 (MQ=255) ccGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGt > 2:2885049/1‑100 (MQ=255) cGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGt > 1:210461/1‑99 (MQ=255) cGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTc < 1:1937606/100‑1 (MQ=255) tGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCAt < 1:3612601/100‑1 (MQ=255) gAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATc < 2:250595/100‑1 (MQ=255) aaaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATcc > 1:2988592/1‑100 (MQ=255) tGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgc < 2:1625840/100‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct > 1:2920590/1‑100 (MQ=255) cTGAGAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgctg < 2:1961995/99‑1 (MQ=255) gATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCGGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtgatg < 1:3443377/100‑1 (MQ=255) gATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtgatg > 1:4135510/1‑100 (MQ=255) aTAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAAAGATCATGAGTAGCCTGACAGGCACCGATAATAGCGTCATCCTGCtgatga < 2:3149807/100‑1 (MQ=255) tAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGAc > 2:2553041/1‑100 (MQ=255) tAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGAc < 1:1875823/100‑1 (MQ=255) aCGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGAcc < 2:1133198/99‑1 (MQ=255) aCGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCa > 2:3135534/1‑100 (MQ=255) cGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCAt > 2:3943022/1‑100 (MQ=255) gATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCAtt > 1:232145/1‑100 (MQ=255) aTCCGCGCGTTGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCTTCCTGCTGATGACCATTg < 1:3661288/100‑1 (MQ=255) aTCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTg > 1:39738/1‑100 (MQ=255) aTCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTg > 2:628166/1‑100 (MQ=255) cgcgcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCg > 1:1916405/1‑100 (MQ=255) cgcgcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCg > 1:192850/1‑100 (MQ=255) gcgcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGa < 2:4038708/100‑1 (MQ=255) cgcgTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGaa < 1:3893559/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACTTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 1:1911008/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 1:3595837/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 2:1174977/100‑1 (MQ=255) cgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGa < 2:1420492/100‑1 (MQ=255) ggtggCGCTGGTCATTCGCCAGTGGGTAAAGAACGATCATGAGTAACCTGACAGGCACCGAGAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGAcc < 2:3600213/99‑1 (MQ=255) gtggCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCgg < 2:1019198/100‑1 (MQ=255) tggCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCggg > 2:1995783/1‑100 (MQ=255) tggCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCgg > 2:2274320/1‑99 (MQ=255) ggCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGggc > 1:3071154/1‑100 (MQ=255) ncTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGCAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGggcggc > 2:2232165/2‑100 (MQ=255) gcTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGggcggc > 1:830654/1‑100 (MQ=255) ggTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCaga > 1:846220/1‑100 (MQ=255) gTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCagag > 1:2288117/1‑100 (MQ=255) aTTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtg < 2:2015583/100‑1 (MQ=255) aTTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtg > 2:2623604/1‑100 (MQ=255) ttCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAACAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtgt > 1:243009/1‑100 (MQ=255) tCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGtt < 1:200831/100‑1 (MQ=255) cGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTc > 1:1734753/1‑100 (MQ=255) gCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATACTGCTGATAACCATTGGCGAAAACCGGGCGGCAGAGGTGTTCa > 2:692833/1‑100 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGAACAGATAAAAGCGTCATCCTGCTGATGACAATTGGCGAAGACCAAGCACCAGAGGAGTTCa > 2:3108976/1‑100 (MQ=255) cccgTGGATAAATAACGATCATGAGTAACCTGACAGGCACCCATAAAAGCGCCATCCTGCTGATGCCCATTGGCGAAGACCGGGCGGCAGAGGCGCTCaa > 2:2294977/4‑100 (MQ=255) ccAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCaa < 1:2642468/100‑1 (MQ=255) cAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAg < 1:3034707/100‑1 (MQ=255) cAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAg < 1:2773185/100‑1 (MQ=255) aGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGc < 2:2307111/100‑1 (MQ=255) ggATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCAcc < 2:1327265/100‑1 (MQ=255) | CGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCACC > NC_000913/2014770‑2014964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |