| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,019,158 | G→A | 73.5% | S258N (AGT→AAT) | fliK → | flagellar hook‑length control protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,019,158 | 0 | G | A | 73.5% | 175.9 / 82.3 | 117 | S258N (AGT→AAT) | fliK | flagellar hook‑length control protein |
| Reads supporting (aligned to +/- strand): ref base G (16/15); new base A (38/48); total (54/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.18e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
TCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCA > NC_000913/2019062‑2019254 | tCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGc < 2:3226376/100‑1 (MQ=255) cgccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCa > 1:3940804/1‑100 (MQ=255) gccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCag > 1:682829/1‑100 (MQ=255) gccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCag < 2:1014079/100‑1 (MQ=255) gccgcACCTGTTTTGAGTGCACCGCTCGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATCTCGCTGTTCACCCGCCAGGGGCAACACAATGCa > 2:2766541/1‑99 (MQ=255) gcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGt < 2:2316891/100‑1 (MQ=255) aCCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTg < 2:1459726/100‑1 (MQ=255) aCCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTg < 1:3331297/100‑1 (MQ=255) aCCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTg < 1:2374427/100‑1 (MQ=255) ccTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGc > 2:119623/1‑100 (MQ=255) tGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGTATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGt > 2:3220445/1‑100 (MQ=255) tGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGt > 1:1056171/1‑100 (MQ=255) tttGAGTGCACCGCTGGGTTCTCACTAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTg < 2:3366816/100‑1 (MQ=255) tttGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCagacgcaactctg < 2:3855124/100‑11 (MQ=255) aGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCAc < 1:3946282/99‑1 (MQ=255) gTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCAccc > 1:1204901/1‑100 (MQ=255) gTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCAccc > 2:1813329/1‑100 (MQ=255) gTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCAccc < 1:2258201/100‑1 (MQ=255) tGCATCACTGTGTTCTCACGAATGGCAACTATCATTAAGCTAGCATATTTCGCTGTTCACCCGCCATGGGCAACTATATGCAGAGTTGCGTCTGCACCCg < 2:1505889/100‑1 (MQ=255) gCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGc > 1:1754826/1‑100 (MQ=255) gCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGc > 2:2945497/1‑100 (MQ=255) cACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCa > 1:3406355/1‑100 (MQ=255) ccGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAgg < 1:196191/100‑1 (MQ=255) cGCTGGATTCTCACGAATGCCAACATTAATTAAGCCCGCATCTTTCGCGGTTCACCCGCCAGGCGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAgg < 1:2483521/99‑1 (MQ=255) gCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGAt > 1:3677767/1‑100 (MQ=255) cTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGAtt < 2:2242315/100‑1 (MQ=255) gggTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTa > 2:2972846/1‑100 (MQ=255) gggTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTa < 2:2796219/100‑1 (MQ=255) ggTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAg < 2:1204896/100‑1 (MQ=255) ggTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTCCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAg < 2:3889659/100‑1 (MQ=255) ggTTCTCACGAATGGCAACAATCATTAAACCAGCATATTTCGCTGTTCACCCGCCATGGACAACAAAAAGCAGAGTTGCGTCTGCACCCGCAGGATTTAg > 2:1819954/1‑100 (MQ=255) gTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAgg > 2:2026332/1‑100 (MQ=255) gTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAgg < 1:425198/100‑1 (MQ=255) gTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAgg < 2:1258464/100‑1 (MQ=255) gTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTAAgg > 2:554820/1‑100 (MQ=255) ttCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGt > 2:2121399/1‑100 (MQ=255) tctcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTg > 1:2433443/1‑100 (MQ=255) ctcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGCGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTg > 2:3541177/1‑99 (MQ=255) tctcGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGaa < 1:1634408/97‑1 (MQ=255) tcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGaa > 1:1346823/1‑100 (MQ=255) cACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAg > 2:2026819/1‑100 (MQ=255) cACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAg < 1:3298007/100‑1 (MQ=255) cACGAATGGCAACAATAATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAAAAAAGTTAAGAGTTGCGTCTGCACCCGCAGGATTTAGGTg > 2:144475/1‑97 (MQ=255) aCGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGt < 2:1324329/100‑1 (MQ=255) cGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTg < 1:2972863/100‑1 (MQ=255) cGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGaaaga > 2:1634399/1‑97 (MQ=255) tGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCaaa < 2:1518297/100‑1 (MQ=255) ggCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAt > 2:1747194/1‑100 (MQ=255) gCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAtc > 2:390277/1‑100 (MQ=255) caacaaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAtct < 2:150181/100‑1 (MQ=255) aacaaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAtctc > 1:3601100/1‑100 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc > 2:4120585/1‑100 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc < 2:2021110/100‑1 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc < 1:3198081/100‑1 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc < 2:39795/100‑1 (MQ=255) tAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGt < 2:233262/100‑1 (MQ=255) gCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGga < 1:3541204/100‑1 (MQ=255) ccAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAGGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGTAAATCTCCCTCAAAGTGgat > 1:1625817/1‑100 (MQ=255) ccAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgat < 1:4160328/100‑1 (MQ=255) ccAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgat < 1:1208462/100‑1 (MQ=255) aGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatga > 2:137884/1‑100 (MQ=255) gCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatgat < 1:1902853/100‑1 (MQ=255) gCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCTAATCTCCCTCAAAGTGgatgat < 2:3180938/100‑1 (MQ=255) atatTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATaa < 2:3141065/100‑1 (MQ=255) tgtCGCTTTTCTCCCGCCTGGGCCAACAAAGTGCAGAGTTGAGGCTGCTCCGGCAGGATTTATGGGAAGTGCAAATCTCCCTCAAAGTGTAGGATAAc < 2:1359200/96‑1 (MQ=255) ttCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAg > 2:1448586/1‑100 (MQ=255) cGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgc < 2:2000683/100‑1 (MQ=255) cGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgc > 2:1701260/1‑100 (MQ=255) gCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgcg > 1:829803/1‑100 (MQ=255) gCTGTGCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCGGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgc < 2:3400607/99‑1 (MQ=255) tGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCa < 2:2894310/100‑1 (MQ=255) gTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCaa > 2:2007987/1‑100 (MQ=255) cACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATc < 1:4005981/100‑1 (MQ=255) cACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATc > 1:524935/1‑100 (MQ=255) cACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATc > 2:1286641/1‑100 (MQ=255) aCCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATcc > 1:789148/1‑100 (MQ=255) aCCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATc > 2:2441402/1‑99 (MQ=255) cccGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCa > 2:2651222/1‑100 (MQ=255) cccGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCa > 1:3337051/1‑100 (MQ=255) cccGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCa < 1:2180937/100‑1 (MQ=255) cccGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTAATGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCa > 2:1417716/1‑100 (MQ=255) ccGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCATGCGCAAATCCAg < 1:2736960/100‑1 (MQ=255) cGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGa > 2:2004072/1‑100 (MQ=255) cGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGa < 1:2796710/100‑1 (MQ=255) gCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAACTCTCCCTCCAAGTGGATGATAACCAGGCGCAAATCCAGAt > 1:179087/1‑100 (MQ=255) gCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGAt > 2:3482213/1‑100 (MQ=255) ccAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATg < 1:2407942/100‑1 (MQ=255) ccAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATg < 1:2278366/100‑1 (MQ=255) cAGGGGCAACAAAGTGCAGAGTTGCGTCTGAACCAGCAGGATTTAGATGAAGCGAAAATCTCCCACAAAGTGGATGATAACCAGGCGCAAATCCAg < 2:615524/96‑1 (MQ=255) cAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATgg < 1:3743996/100‑1 (MQ=255) ggggCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGtt < 1:716183/100‑1 (MQ=255) ggggCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGtt > 1:158243/1‑100 (MQ=255) gggCAACAAAGTGCAGAGTTGCGTCTACACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGttt > 1:2544215/1‑100 (MQ=255) ggCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTc < 1:2650034/100‑1 (MQ=255) gCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa < 2:668327/100‑1 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa < 2:2197520/100‑1 (MQ=255) caacaaAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCAc < 2:3774793/100‑1 (MQ=255) acaaAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCAcc > 2:1979075/1‑99 (MQ=255) caaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGc > 1:936181/1‑100 (MQ=255) aaaGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCa < 1:2367992/100‑1 (MQ=255) | TCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCA > NC_000913/2019062‑2019254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |