BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,469,656	(T)_7→8	coding (526/1332 nt)	gtrS →	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,469,649	1	.	T	100.0%	338.3 / NA	94	L173L (CTA→CTT)	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (43/51); total (43/51)

Only 100 of 114 total aligned reads displayed.

AATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACAC  >  NC_000913/2469550‑2469742

aaTGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTa                                                                                                 >  2:1739179/1‑100 (MQ=255)

aaTGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTa                                                                                                 >  1:665827/1‑100 (MQ=255)

  tGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑tt                                                                                             >  2:1384768/1‑100 (MQ=255)

  tGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑tt                                                                                             >  2:737606/1‑100 (MQ=255)

   gTTTGCATCATTCTATCAAGAGCAAATAGTTATGATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCTAAAACAATAAATCTATGCTTTTGCTA‑‑ttt                                                                                            >  2:1230067/1‑100 (MQ=255)

   gTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttt                                                                                            >  1:1308641/1‑100 (MQ=255)

   gTTTGCATCATTCTATCAAGAGCAAATAGTTAGAATTTTCCTTCCATTTTTGGTGTATTCATGAACATGCAAAAACAATAAATCTCTGCTTTTGCTA‑‑ttt                                                                                            >  1:339479/1‑100 (MQ=255)

      tGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑tttttt                                                                                         <  1:869222/100‑1 (MQ=255)

      tGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑tttttt                                                                                         <  2:423935/100‑1 (MQ=255)

       gCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttt                                                                                        >  2:32571/1‑100 (MQ=255)

       gCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttt                                                                                        >  1:1824087/1‑100 (MQ=255)

        catcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑tttttttt                                                                                       <  2:1090689/100‑2 (MQ=255)

          tcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcg                                                                                     >  1:1292022/1‑97 (MQ=255)

          tcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcg                                                                                     >  1:1101849/1‑97 (MQ=255)

          tcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcg                                                                                     >  1:1257919/1‑97 (MQ=255)

          tcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcg                                                                                     <  1:1609328/100‑4 (MQ=255)

           catTCTATCAAGAGCAAATAGTTATACTTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcgt                                                                                    >  1:1245742/1‑96 (MQ=255)

           catTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcgt                                                                                    >  2:911618/1‑96 (MQ=255)

            atTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑ttttttttcgtt                                                                                   >  1:190162/1‑95 (MQ=255)

             ttCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTg                                                                                   <  1:32571/100‑1 (MQ=255)

              tCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGc                                                                                  <  1:9931/100‑1 (MQ=255)

              tCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGc                                                                                  <  2:643985/100‑1 (MQ=255)

               cTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCt                                                                                 >  1:854564/1‑100 (MQ=255)

               cTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCt                                                                                 <  1:787954/100‑1 (MQ=255)

                tATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCta                                                                                >  1:564151/1‑100 (MQ=255)

                tATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCta                                                                                >  1:1765003/1‑100 (MQ=255)

                 aTCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCtaa                                                                               <  1:949013/100‑1 (MQ=255)

                 aTCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCtaa                                                                               >  1:1839725/1‑100 (MQ=255)

                     agagCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTaataat                                                                           >  1:21205/1‑100 (MQ=255)

                      gagCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAataata                                                                          >  1:1160483/1‑100 (MQ=255)

                        gCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATc                                                                        >  1:160127/1‑100 (MQ=255)

                        gCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATc                                                                        <  1:1198599/100‑1 (MQ=255)

                         cAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCt                                                                       <  1:129335/100‑1 (MQ=255)

                          aaaaAGTAAAAATTTTCCTTCCATTTTTGGTGTATTCATTAACTTGCAAAAACAATAAATCTATGCTTTTGCAAT‑TTTTTTTCGTTGCTAATAATATCt                                                                       <  2:496464/99‑1 (MQ=255)

                          aaaTAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTa                                                                      >  2:1458253/1‑100 (MQ=255)

                            aTAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACt                                                                    <  1:308494/100‑1 (MQ=255)

                                ttATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTa                                                                >  1:403016/1‑100 (MQ=255)

                                 tataATTTTCCTTGCATTTTTGGTGTATTCAGTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTaa                                                               >  1:1373022/1‑100 (MQ=255)

                                 tataATTTTCCTTCCATTTTTTGTGTATTAAATAAAATGAAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTa                                                                <  2:1883071/99‑1 (MQ=255)

                                  ataATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTaaa                                                              <  1:208621/100‑1 (MQ=255)

                                  ataATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTaaa                                                              >  1:421538/1‑100 (MQ=255)

                                     aTTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAAt                                                           >  2:1202770/1‑100 (MQ=255)

                                      ttttCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATc                                                          >  1:1045903/1‑100 (MQ=255)

                                      ttttCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATc                                                          <  2:1836669/100‑1 (MQ=255)

                                       tttCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCa                                                         >  2:1950551/1‑100 (MQ=255)

                                       tttCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCa                                                         >  1:1332077/1‑100 (MQ=255)

                                        ttccttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCa                                                         <  2:366857/100‑1 (MQ=255)

                                         tccttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAt                                                       <  1:1709075/100‑1 (MQ=255)

                                         tccttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAt                                                       <  1:1592176/100‑1 (MQ=255)

                                          ccttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAtt                                                      <  1:737609/100‑1 (MQ=255)

                                          ccttccATTTTTGATGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAtt                                                      <  2:1090243/100‑1 (MQ=255)

                                          atctccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAtt                                                      <  1:1816294/97‑1 (MQ=255)

                                           cttccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAAttt                                                     <  1:1950569/100‑1 (MQ=255)

                                             tccATTTTTGGTGTATTCAATAAAATAAAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCCACTGCTAAAAATCAATTtat                                                   <  2:1245736/100‑1 (MQ=255)

                                              ccATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTtata                                                  <  2:598984/100‑1 (MQ=255)

                                               cATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTTTTTTTTTTTAATATCTACTGCTAAAAATCAATTTatat                                                 >  2:580583/1‑100 (MQ=255)

                                               cATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTatat                                                 >  2:1483223/1‑100 (MQ=255)

                                               cATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTatat                                                 <  2:1308633/100‑1 (MQ=255)

                                                aTTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATAtt                                                >  2:874633/1‑100 (MQ=255)

                                                   tttGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAc                                             <  1:1810252/100‑1 (MQ=255)

                                                   tttGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAc                                             <  1:317913/100‑1 (MQ=255)

                                                      ggTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAcccc                                          <  2:1203212/100‑1 (MQ=255)

                                                        tgtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCAc                                        <  1:911622/100‑1 (MQ=255)

                                                         gtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                       <  1:843076/100‑1 (MQ=255)

                                                         gtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                       >  2:1144863/1‑100 (MQ=255)

                                                         gtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                       <  1:114985/100‑1 (MQ=255)

                                                         gtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                       <  1:710371/100‑1 (MQ=255)

                                                         gtATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACt                                       >  1:1022858/1‑100 (MQ=255)

                                                            ttCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAAt                                    <  2:190161/100‑1 (MQ=255)

                                                              cATTAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATa                                   >  2:896986/1‑99 (MQ=255)

                                                                 tAACATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTTCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAgtgt                               >  2:1646951/1‑100 (MQ=255)

                                                                  aaCATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAgtg                                >  2:2042557/1‑98 (MQ=255)

                                                                  aaCATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCAACTAATAgtgt                               >  2:1974110/1‑99 (MQ=255)

                                                                    cATGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTAtt                            >  1:599181/1‑100 (MQ=255)

                                                                     tctcAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTc                           <  2:875627/97‑1 (MQ=255)

                                                                      tGCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCa                          <  1:642863/100‑1 (MQ=255)

                                                                       gCAATAACAATAAATCTATTCTTGTTTTAT‑TTTTTTTCGTTTCTAATCATAGCTACTCCTAAAAATCAATTTATATTAACCCCACTAATAgtg                                <  2:1827880/93‑1 (MQ=255)

                                                                       gCAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCat                         <  1:1979711/100‑1 (MQ=255)

                                                                        cAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCata                        >  1:222878/1‑100 (MQ=255)

                                                                        cAAAAACAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCaga                        >  1:875630/1‑98 (MQ=255)

                                                                          aaaaCAATAAATCTATGCTTTTGCTATTTTTTTTTTGTTGCTTATAATATCTACTGCTAAAAATCTATTTATATTAACCCCACTAATAGTGTATTTatat                       >  2:338545/1‑100 (MQ=255)

                                                                           aaaCAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCatatta                     >  2:1486260/1‑100 (MQ=255)

                                                                              cAATAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCatattatat                  >  1:1531383/1‑100 (MQ=255)

                                                                               aaTAAATCTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCatattatatt                 >  1:1683005/1‑100 (MQ=255)

                                                                                     tCTATGCTTTTGCTAT‑TTTTTTTTTTTTTTTTTAATATCTACTGCTAAAAATCAATTTATATTTACCCCACTATTAGTGTTTTCATATTATAtttttttt           >  2:817337/1‑100 (MQ=255)

                                                                                     tCTATGCTTTTGCTAT‑TTTTTTTCGTTTCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTCATAGTGTATTCATATTATAtttttttt           <  1:1974128/100‑1 (MQ=255)

                                                                                      cTATGCTTTTGCTAT‑TTTTTTTTTTTTTTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATAtttttttt           >  2:161869/1‑99 (MQ=255)

                                                                                      cTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTg          <  2:1332150/100‑1 (MQ=255)

                                                                                      cTATGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTg          <  1:1144869/100‑1 (MQ=255)

                                                                                        aTGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGAt        <  2:162017/100‑1 (MQ=255)

                                                                                        aTGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGAt        <  1:1053683/100‑1 (MQ=255)

                                                                                         tGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATa       <  1:671605/100‑1 (MQ=255)

                                                                                         tGCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATa       <  1:1454320/100‑1 (MQ=255)

                                                                                          gCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAg      <  2:622531/100‑1 (MQ=255)

                                                                                          gCTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATA‑TTTTTTTGATAGa     >  2:1497158/1‑100 (MQ=255)

                                                                                           cTTTTGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGa     >  1:1648841/1‑100 (MQ=255)

                                                                                            ttttGCTAT‑TTTTTTTTTTTTTTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGAt        >  2:1027380/1‑96 (MQ=255)

                                                                                             tttGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGata   <  1:1384777/100‑3 (MQ=255)

                                                                                              ttGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCTCACTAATAGTGTATTCATATTATATTTTTTTTGATAGacac  >  2:916637/1‑100 (MQ=255)

                                                                                              ttGCTAT‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGacac  <  2:1824071/100‑1 (MQ=255)

AATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTA‑‑TTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACAC  >  NC_000913/2469550‑2469742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`