BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,706,017	0	C	T	21.2%	257.6 / 60.1	123	intergenic (‑227/+81)	dppB/dppA	dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor
Reads supporting (aligned to +/- strand): ref base C (52/37); new base T (23/1); total (85/38)
Fisher's exact test for biased strand distribution p-value = 4.21e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.76e-01

Only 100 of 126 total aligned reads displayed.

GCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT  >  NC_000913/3705918‑3706116

gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATAc                                                                                                             >  2:1997445/1‑100 (MQ=255)

gcgcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAACTCAATAc                                                                                                             <  1:1078162/100‑1 (MQ=255)

       cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑g                                                                                                     <  1:1360994/100‑1 (MQ=255)

        gggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑Ga                                                                                                    >  1:1145712/1‑100 (MQ=255)

            ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑At‑t‑‑‑t                                                                                           <  1:1976458/100‑1 (MQ=255)

              aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTc                                                                                         >  2:1962867/1‑100 (MQ=255)

              aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTc                                                                                         >  2:372873/1‑100 (MQ=255)

               cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑g                                                                                      <  1:831111/100‑1 (MQ=255)

                aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTa                                                                                    <  1:1493074/100‑1 (MQ=255)

                 gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTa                                                                                    <  1:1814764/100‑1 (MQ=255)

                     gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGcc                                                                                >  1:1016987/1‑100 (MQ=255)

                        gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGa                                                                             >  1:530511/1‑100 (MQ=255)

                          cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATa                                                                           >  2:667439/1‑100 (MQ=255)

                          cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATa                                                                           <  1:1997463/100‑1 (MQ=255)

                              gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCg                                                                       >  2:1777728/1‑100 (MQ=255)

                               tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCgg                                                                      >  2:1530745/1‑100 (MQ=255)

                                  gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgc                                                                   >  2:1740492/1‑100 (MQ=255)

                                   gaatttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAgcgc                                                                 >  1:446531/11‑100 (MQ=17)

                                   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                  <  2:86888/100‑1 (MQ=255)

                                   cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAgcg                                                                  >  1:1234768/1‑100 (MQ=255)

                                    attttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATACAAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAgcgc                                                                 >  1:1189078/10‑100 (MQ=17)

                                     ttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑A‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCa                                                                >  2:1660720/9‑100 (MQ=18)

                                      tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑A‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCAt                                                               >  2:1717047/8‑100 (MQ=18)

                                       ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATACAAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCC‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCa                                                             >  1:933144/7‑100 (MQ=18)

                                       ttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATc                                                              >  2:863018/7‑100 (MQ=21)

                                       gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc                                                              <  1:607170/100‑1 (MQ=255)

                                       gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATc                                                              <  1:115794/100‑1 (MQ=255)

                                        tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa                                                             >  2:1295220/1‑100 (MQ=255)

                                        tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa                                                             <  2:90517/100‑1 (MQ=255)

                                        tgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCa                                                             >  1:993868/6‑100 (MQ=18)

                                         ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg                                                            >  1:1382930/1‑100 (MQ=255)

                                         ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg                                                            >  2:802348/1‑100 (MQ=255)

                                         gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGG‑GC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAg                                                            >  1:1353622/5‑100 (MQ=17)

                                          taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg                                                           >  1:2256/4‑100 (MQ=17)

                                          taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑C‑‑‑TCCGTGTAGGCCTGATAAGCGTAGCGCATCAgg                                                           >  2:779351/4‑100 (MQ=18)

                                          taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑A‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg                                                           >  1:482653/4‑100 (MQ=18)

                                           aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCATGG‑GC‑C‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc                                                          >  1:826989/3‑100 (MQ=17)

                                           aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑T‑‑‑CTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGc                                                          >  1:852674/3‑100 (MQ=18)

                                           aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc                                                          >  1:44662/1‑100 (MQ=255)

                                           aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc                                                          >  2:529570/1‑100 (MQ=255)

                                            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCA‑GA‑AA‑C‑‑‑CTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                         >  1:760413/2‑100 (MQ=18)

                                            ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAACAGTGCAAATTCAATATATTGCA‑AT‑CT‑T‑‑‑CTG‑‑GTAGGCCTGATAAGCATCGCGCATCAGGCa                                                         >  1:636226/2‑100 (MQ=18)

                                            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                         >  1:1234892/2‑100 (MQ=17)

                                            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCATGAAAATTCAATACATTGCA‑AG‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                         >  2:162785/2‑100 (MQ=17)

                                            ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑T‑‑‑AT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                         >  2:1347611/2‑100 (MQ=17)

                                            ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa                                                         >  2:1502069/2‑100 (MQ=18)

                                            ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa                                                         >  2:576395/2‑100 (MQ=18)

                                             gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt                                                        >  1:1175680/1‑100 (MQ=255)

                                             gCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCGTGCAAATTCAATACATTGCA‑TG‑GG‑C‑‑‑CAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                        >  2:939148/1‑99 (MQ=17)

                                             gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                        >  1:1238606/1‑99 (MQ=21)

                                              ccggataaggcgTTCACGCCGCATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCA‑GG‑AT‑A‑‑‑CGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat                                                       >  2:1724019/9‑98 (MQ=18)

                                              ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCAAAATATTGCA‑GG‑AG‑T‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAttt                                                      >  1:96428/9‑100 (MQ=21)

                                              ccGGATGCGGCGTTAACGCCTTATCCAGCCTACAACATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt                                                       >  2:1408652/1‑100 (MQ=255)

                                               cggataaggcgTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCagtt                                                      >  2:1176964/8‑97 (MQ=21)

                                               cggataaggcgTTCACGCCGCATCCGGCCTACAAAATTGTGTAAATTCAATAAATTGAT‑CG‑AT‑C‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtt                                                      >  1:1643817/8‑100 (MQ=18)

                                                ggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc                                                     >  1:1749440/7‑96 (MQ=21)

                                                ggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑C‑‑‑CTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc                                                     >  1:1798937/7‑96 (MQ=21)

                                                ggataaggcgTTCACGCCGCATCCGGCCTACAAAAGCATGAAAATTCAATATATTGCA‑GG‑AG‑C‑‑‑TGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt                                                     >  1:507001/7‑100 (MQ=18)

                                                ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAATCATGCAAATCCTAAATATTGCA‑GG‑AG‑T‑‑‑TAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat                                                    >  2:1133193/7‑98 (MQ=21)

                                                ggATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt                                                     <  1:1862894/100‑1 (MQ=255)

                                                 gataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑T‑‑‑CAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt                                                    >  1:806205/6‑100 (MQ=17)

                                                 gataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGCA‑GG‑AA‑C‑‑‑GAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaactac                                                    >  1:1824891/6‑95 (MQ=25)

                                                 gATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt                                                    <  1:1013930/100‑1 (MQ=255)

                                                   taaggcgTTTACGCCGCATCCGGCCTACAAAAATGTGCAAATTCAATAAATTGC‑‑‑A‑AT‑TCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCAatttgg                                                   >  2:1131838/4‑98 (MQ=21)

                                                   tGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc                                                  >  2:1134089/1‑100 (MQ=255)

                                                     cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct                                                >  2:422702/1‑100 (MQ=255)

                                                     cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct                                                >  2:440645/1‑100 (MQ=255)

                                                      ggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt                                               >  1:1599143/1‑100 (MQ=255)

                                                          ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc                                           <  2:1692384/100‑1 (MQ=255)

                                                          ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc                                           <  1:372874/100‑1 (MQ=255)

                                                            aaCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCAt                                         >  1:1571042/1‑100 (MQ=255)

                                                              cGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCa                                       <  2:369722/100‑1 (MQ=255)

                                                               gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg                                      >  1:773789/1‑100 (MQ=255)

                                                               gCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAg                                      >  1:970815/1‑100 (MQ=255)

                                                                 cTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc                                    >  1:2043573/1‑100 (MQ=255)

                                                                    aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTTTCTTTTCTATCAGTCTTg                                 >  2:174853/1‑100 (MQ=21)

                                                                    aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg                                 <  2:1931552/100‑1 (MQ=255)

                                                                      ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa                               <  2:1382921/100‑1 (MQ=255)

                                                                              cAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt                       >  1:1038766/1‑100 (MQ=255)

                                                                                aaaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTaa                     >  2:1498311/1‑100 (MQ=255)

                                                                                 aaTCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat                    <  1:1962885/100‑1 (MQ=255)

                                                                                   tCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAatta                  <  1:185476/100‑1 (MQ=255)

                                                                                    cGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat                 >  2:134419/1‑100 (MQ=255)

                                                                                    cGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTCATAAGCGGAGCGCATCAGGGATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat                 <  2:1115528/100‑1 (MQ=255)

                                                                                     gTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt                <  1:1926052/100‑1 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               <  2:55477/100‑1 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               <  1:576397/100‑1 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               >  2:737373/1‑100 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               <  1:1502078/100‑1 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               >  1:245925/1‑100 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               <  1:1530754/100‑1 (MQ=255)

                                                                                      tGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc               >  1:1031622/1‑100 (MQ=255)

                                                                                       gCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg              >  1:363581/1‑100 (MQ=255)

                                                                                       gCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg              <  1:1518846/100‑1 (MQ=255)

                                                                                         aaaTTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt            >  1:1492036/1‑100 (MQ=255)

                                                                                          aaTTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa           <  2:1531623/100‑1 (MQ=255)

                                                                                          aaTTCAATACATAGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa           >  1:1342942/1‑100 (MQ=255)

                                                                                               aaTACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGAc      >  1:89300/1‑100 (MQ=255)

                                                                                                aTACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg     <  2:1580326/100‑1 (MQ=255)

                                                                                                   cATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGttt  >  2:155595/1‑100 (MQ=255)

GCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑T‑‑‑TTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT  >  NC_000913/3705918‑3706116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`