BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	720,946	C→T	intergenic (+106/+110)	ybfK → / ← kdpE	uncharacterized protein/response regulator in two‑component regulatory system with KdpD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	720,946	0	C	T	100.0%	395.3 / NA	111	intergenic (+106/+110)	ybfK/kdpE	uncharacterized protein/response regulator in two‑component regulatory system with KdpD
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (59/52); total (59/52)

Only 100 of 111 total aligned reads displayed.

AAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTGTA  >  NC_000913/720849‑721042

aaGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAg                                                                                                <  1:377142/100‑1 (MQ=255)

  ggTGAAGATATTCTATCCAGGAAATACGTTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTa                                                                                              <  2:437471/100‑1 (MQ=255)

  ggTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTa                                                                                              <  1:1972489/100‑1 (MQ=255)

  ggTGAAGATATTCTATACAGGAAATACGGTTTGACTGTGTAGTAAAAAAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTa                                                                                              <  2:1435128/100‑1 (MQ=255)

    tGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAat                                                                                            <  1:868201/100‑1 (MQ=255)

     gAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAata                                                                                           <  1:814784/100‑1 (MQ=255)

      naGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAatat                                                                                          >  1:952489/2‑100 (MQ=255)

       aGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAAtata                                                                                         >  2:578046/1‑100 (MQ=255)

       aGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAAtata                                                                                         <  1:80943/100‑1 (MQ=255)

        gATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATaa                                                                                        <  1:1641182/100‑1 (MQ=255)

           atTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAat                                                                                     <  2:1227311/100‑1 (MQ=255)

           atTCTATCAAAAAAATACGGTTAAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAat                                                                                     <  2:338566/100‑1 (MQ=255)

           atTCTATACAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAat                                                                                     <  2:228466/100‑1 (MQ=255)

             tCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAatat                                                                                   >  2:1252413/1‑100 (MQ=255)

                aTCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGa                                                                                >  1:1462874/1‑100 (MQ=255)

                aTCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGa                                                                                <  1:1410952/100‑1 (MQ=255)

                 tCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGaa                                                                               >  1:1418857/1‑100 (MQ=255)

                  ccAGGAACTACAGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAAt                                                                              >  2:1076676/1‑100 (MQ=255)

                  ccAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAAt                                                                              <  1:640645/100‑1 (MQ=255)

                   cAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAAtt                                                                             >  2:542043/1‑100 (MQ=255)

                   cAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAAtt                                                                             >  1:1716410/1‑100 (MQ=255)

                    aGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAAt                                                                              <  2:875223/98‑1 (MQ=255)

                    aGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTg                                                                            >  1:1006584/1‑100 (MQ=255)

                    aGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTg                                                                            <  2:1757825/100‑1 (MQ=255)

                    aGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTg                                                                            >  2:1483558/1‑100 (MQ=255)

                     ggAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGt                                                                           >  1:1393957/1‑100 (MQ=255)

                        aaTACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTAt                                                                        >  2:1199353/1‑100 (MQ=255)

                         aTACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAACTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTAtt                                                                       >  1:1894955/1‑100 (MQ=255)

                          tACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTAttt                                                                      >  1:572187/1‑100 (MQ=255)

                           aCGATTGTACTGTGATGGTAATTAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTAtttt                                                                     <  2:336040/100‑1 (MQ=255)

                            cGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACGTAGTAATATAAAATATTGAATTGTTAttttt                                                                    >  2:886209/1‑100 (MQ=255)

                             ggTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtg                                                                   >  2:169609/1‑100 (MQ=255)

                             ggTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtg                                                                   >  1:848964/1‑100 (MQ=255)

                              gTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgt                                                                  >  2:1300855/1‑100 (MQ=255)

                              gTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgt                                                                  <  1:1002044/100‑1 (MQ=255)

                               ttGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgtg                                                                 <  1:833441/100‑1 (MQ=255)

                               ttGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgtg                                                                 >  1:252004/1‑100 (MQ=255)

                               ttGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgtg                                                                 <  2:1418848/100‑1 (MQ=255)

                               ttGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgtg                                                                 <  1:1090829/100‑1 (MQ=255)

                                tGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTtgtgt                                                                <  1:256488/100‑1 (MQ=255)

                                  aaCTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTgtgtgt                                                              <  2:1459232/100‑1 (MQ=255)

                                    cTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGtgttg                                                            <  1:1630979/100‑1 (MQ=255)

                                    cTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGtgttg                                                            >  2:457730/1‑100 (MQ=255)

                                     tgtgAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGtgttgt                                                           <  1:1422451/100‑1 (MQ=255)

                                      gtgAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTgttgtt                                                          <  2:181524/100‑1 (MQ=255)

                                           ggTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGa                                                     >  2:1831426/1‑100 (MQ=255)

                                           ggTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGa                                                     >  2:950715/1‑100 (MQ=255)

                                           ggTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGa                                                     >  1:1932357/1‑100 (MQ=255)

                                            gTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGa                                                     <  2:1006579/99‑1 (MQ=255)

                                            gTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGAt                                                    <  2:934343/100‑1 (MQ=255)

                                            gTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGAt                                                    >  2:149634/1‑100 (MQ=255)

                                             tGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATa                                                   >  2:692437/1‑100 (MQ=255)

                                             tGATCAAGAAAAAATTATCAATCTGAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGAt                                                    <  1:1705900/99‑1 (MQ=255)

                                              gATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATaa                                                  >  2:1889507/1‑100 (MQ=255)

                                              gATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATaa                                                  >  1:1920649/1‑100 (MQ=255)

                                              gATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATaa                                                  >  2:754074/1‑100 (MQ=255)

                                              gATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATaa                                                  >  1:727982/1‑100 (MQ=255)

                                                  aaTAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAg                                              >  1:1264657/1‑100 (MQ=255)

                                                      aaaaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGt                                          <  1:325914/100‑1 (MQ=255)

                                                      aaaaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGt                                          >  2:765886/1‑100 (MQ=255)

                                                      aaaaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGt                                          >  2:235121/1‑100 (MQ=255)

                                                       aaaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGta                                         >  1:993294/1‑100 (MQ=255)

                                                       aaaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGta                                         <  1:149635/100‑1 (MQ=255)

                                                        aaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGtat                                        >  1:1027450/1‑100 (MQ=255)

                                                        aaaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGtat                                        <  1:1105389/100‑1 (MQ=255)

                                                         aaTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTTTTTTTGTGTGTTGTTTAAGATAAAAAGCCGtat                                        >  1:1176705/1‑99 (MQ=255)

                                                          aTGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGtattt                                      <  2:320557/100‑1 (MQ=255)

                                                               naaTCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATttattat                                 >  2:1538693/2‑100 (MQ=255)

                                                               cAATCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATttattat                                 >  2:1547918/1‑100 (MQ=255)

                                                                aaTCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTTTGTGTTGTTTAAGATAAAAAGCCGTATttattatt                                >  2:347179/1‑100 (MQ=255)

                                                                 aTCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATttattatta                               <  1:1252419/100‑1 (MQ=255)

                                                                 aTCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATttattatta                               >  1:1258294/1‑100 (MQ=255)

                                                                 aTCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATttattatta                               <  1:1076681/100‑1 (MQ=255)

                                                                  tCTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCGGTATttattatta                               >  2:1388886/1‑99 (MQ=255)

                                                                   cTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACg                             <  2:507427/100‑1 (MQ=255)

                                                                   cTTAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACg                             >  1:833399/1‑100 (MQ=255)

                                                                    ttAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACgg                            <  1:1197044/100‑1 (MQ=255)

                                                                     tAATTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGc                           <  1:1547928/100‑1 (MQ=255)

                                                                      aaTTTATTTAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCt                          >  2:1783085/1‑100 (MQ=255)

                                                                       atttatttAATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCtt                         >  1:1591703/1‑100 (MQ=255)

                                                                        tttatttaATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCttt                        <  1:509034/100‑1 (MQ=255)

                                                                         tcttttaATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTtta                       <  2:1292335/97‑1 (MQ=255)

                                                                           atttaATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTttaat                     <  1:1343431/100‑1 (MQ=255)

                                                                            tttaATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTttaatt                    <  2:640371/100‑1 (MQ=255)

                                                                            tttaATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTttaaga                    >  1:1292342/1‑98 (MQ=255)

                                                                              taATGATGAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTttaattaa                  >  2:402068/1‑100 (MQ=255)

                                                                                atgatgAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATtaata                <  1:1575666/100‑1 (MQ=255)

                                                                                atgatgAGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATtaata                <  1:235647/100‑1 (MQ=255)

                                                                                 tgatgaGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTAATAATAAATACGGCtttttatcttaa               <  1:572479/100‑10 (MQ=21)

                                                                                  gatgaGCTTTTTAATTAGTAATATAAAATATTGAATTGCTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATaaa              >  2:1261960/1‑100 (MQ=255)

                                                                                   atgaGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATaaaa             >  2:1991891/1‑100 (MQ=255)

                                                                                    tgaGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAag            >  1:1458830/1‑100 (MQ=255)

                                                                                      aGCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTTATTAATAAAaggc          <  2:1264651/100‑1 (MQ=255)

                                                                                       gCTTTTTACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAaggca         >  1:60582/1‑100 (MQ=255)

                                                                                          ttttACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAaggcaggc      <  1:1575846/100‑1 (MQ=255)

                                                                                            ttACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTg    >  2:1808548/1‑100 (MQ=255)

                                                                                             tACTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTGt   <  1:950719/100‑1 (MQ=255)

                                                                                              aCTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACTGCTTTAATTAATAAAAGGCAGGCTGTa  >  2:1493608/1‑100 (MQ=255)

                                                                                              aCTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTGTa  >  2:1497609/1‑100 (MQ=255)

                                                                                              aCTTAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTGTa  >  1:750532/1‑100 (MQ=255)

AAGGTGAAGATATTCTATCCAGGAAATACGGTTGAACTGTGAAGGTGATCAATAAAAAATGATCAATCTTAATTTATTTAATGATGAGCTTTTTACTCAGTAATATAAAATATTGAATTGTTATTTTTGTGTGTTGTTTAAGATAAAAAGCCGTATTTATTATTACGGCTTTAATTAATAAAAGGCAGGCTGTA  >  NC_000913/720849‑721042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`