| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,490,088 | A→G | G31G (GGT→GGC) | argD ← | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,490,088 | 0 | A | G | 96.0% | 255.8 / ‑0.5 | 77 | G31G (GGT→GGC) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (36/37); total (38/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
CCAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCA > NC_000913/3489991‑3490184 | ccAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGcc > 2:490908/1‑100 (MQ=255) aGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtt > 1:1712759/1‑100 (MQ=255) aGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtt < 2:435075/100‑1 (MQ=255) gcgcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCttt > 1:1534197/1‑100 (MQ=255) gcgcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCttt < 1:1240230/100‑1 (MQ=255) gcgcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCttt < 2:1284861/100‑1 (MQ=255) cgcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtttt > 2:1175530/1‑100 (MQ=255) cAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc < 1:1283008/100‑1 (MQ=255) cAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc > 2:135750/1‑100 (MQ=255) gcaTGGCACTGGCACACCGCCGTAACTGCAATGCCTCCCGCGAAATCGACATACACCTTGCCTAGCTGATCCCAGATGCGGCTGCCCTGTCCTTTTACCg > 2:1908442/3‑100 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 1:212857/100‑1 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 1:1911026/100‑1 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 1:845280/100‑1 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg > 1:553580/1‑100 (MQ=255) tGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGaa < 1:1491786/100‑1 (MQ=255) tGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGaa < 1:122131/100‑1 (MQ=255) ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAAt > 1:1460732/1‑100 (MQ=255) gCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATa > 2:1681393/1‑100 (MQ=255) aTGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAAc < 2:1103826/100‑1 (MQ=255) aTGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAAc < 1:1897282/100‑1 (MQ=255) gCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAActct < 2:277474/100‑1 (MQ=255) cccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAActctn < 2:1414354/100‑2 (MQ=255) cccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTg > 2:1530025/1‑100 (MQ=255) cccAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTg > 2:102448/1‑100 (MQ=255) gCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAg < 1:961826/100‑1 (MQ=255) cGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCa < 1:1006319/100‑1 (MQ=255) tAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATa < 2:1794804/100‑1 (MQ=255) cTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAAt > 1:72761/1‑100 (MQ=255) tGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATc < 2:1174011/100‑1 (MQ=255) cAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCgg < 1:191769/100‑1 (MQ=255) cAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCgg < 1:1198036/100‑1 (MQ=255) aTGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCa < 1:314841/100‑1 (MQ=255) gCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAgg > 2:1566126/1‑100 (MQ=255) gCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAgg < 2:72127/100‑1 (MQ=255) gCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTGTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAgg < 2:1255086/100‑1 (MQ=255) ccACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGa > 2:452582/1‑100 (MQ=255) aCCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATc < 1:1356642/100‑1 (MQ=255) cgcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACt > 1:1755552/1‑100 (MQ=255) cgcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACt > 2:1284696/1‑100 (MQ=255) gcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACtt < 1:1369295/100‑1 (MQ=255) cgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTc < 2:1755538/100‑1 (MQ=255) aaTCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATc < 1:102449/100‑1 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa < 1:336332/100‑1 (MQ=255) cATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGt < 1:1530034/100‑1 (MQ=255) tACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcg < 1:1566136/100‑1 (MQ=255) tACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcg > 2:216161/1‑100 (MQ=255) tACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcg > 2:140155/1‑100 (MQ=255) tACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCCTGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTACATCGAAAGTc > 2:1659106/1‑99 (MQ=255) aCTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgc > 2:626376/1‑100 (MQ=255) aCTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgc < 2:1534188/100‑1 (MQ=255) ccttgccttgCTGGTCCCAGATTCGGCTGCCCTGGCCTATTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgc > 2:1259622/1‑99 (MQ=255) ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGCACAAACTCTGCCGGAGCATCAATCGGCAGGATCACTTCATCGAAAGTcgcgc > 1:1709130/1‑99 (MQ=255) ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 2:971840/1‑100 (MQ=255) ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 2:1847725/1‑100 (MQ=255) ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 1:993427/1‑100 (MQ=255) ccttgccttgCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgcg > 1:514286/1‑100 (MQ=255) cttgccttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCgt > 2:990866/1‑100 (MQ=255) cttgccttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCgt < 1:1681406/100‑1 (MQ=255) tgccttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCgtgt > 2:592192/1‑100 (MQ=255) cttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 2:277447/100‑1 (MQ=255) cttgcTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 2:1111641/100‑1 (MQ=255) ttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAtt < 1:1175536/100‑1 (MQ=255) tgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTg > 1:1750905/1‑100 (MQ=255) tgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTg > 2:413614/1‑100 (MQ=255) gATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgt > 1:1508102/1‑100 (MQ=255) aTCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtt < 1:971844/100‑1 (MQ=255) aTCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtt > 2:785894/1‑100 (MQ=255) cccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttg < 1:140156/100‑1 (MQ=255) ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttgt > 2:1532961/1‑100 (MQ=255) aGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTc < 2:514285/100‑1 (MQ=255) aGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTc < 1:135751/100‑1 (MQ=255) ggCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGc > 1:1681711/1‑100 (MQ=255) cTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCa < 2:1810912/100‑1 (MQ=255) gCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc > 1:642647/1‑100 (MQ=255) gCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc > 2:35332/1‑100 (MQ=255) gCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc > 1:1670290/1‑100 (MQ=255) cTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCa > 1:87162/1‑100 (MQ=255) | CCAGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTCA > NC_000913/3489991‑3490184 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |