| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,799,324 | A→G | intergenic (‑12/+21) | waaU ← / ← waaZ | lipopolysaccharide core biosynthesis/lipopolysaccharide KdoIII transferase; lipopolysaccharide core biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,799,324 | 0 | A | G | 95.3% | 360.6 / 1.1 | 107 | intergenic (‑12/+21) | waaU/waaZ | lipopolysaccharide core biosynthesis/lipopolysaccharide KdoIII transferase; lipopolysaccharide core biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base A (4/1); new base G (41/61); total (45/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
TTATTACGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACT > NC_000913/3799227‑3799419 | ttattaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCAtgtt > 1:1666219/1‑100 (MQ=255) tattaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCAtgtta < 1:707830/100‑1 (MQ=255) tattaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCAtgtta < 2:1941771/100‑1 (MQ=255) attaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCAtgtta < 1:348585/99‑1 (MQ=255) ttaCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCTCATTTTTATACCATgttatt < 2:1252735/100‑1 (MQ=255) aCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTAtttt < 2:909693/100‑1 (MQ=255) aCGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTAtttt < 2:786652/100‑1 (MQ=255) cGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTa > 2:835296/1‑100 (MQ=255) gAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAATTTTTTAATCGCATTTTTATATTATGTTATTTTa > 2:1364951/1‑99 (MQ=255) gAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAg < 2:990494/100‑1 (MQ=255) gAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAg < 2:655243/100‑1 (MQ=255) gAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAg > 2:1450586/1‑100 (MQ=255) aaTAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGtt < 2:1555484/100‑1 (MQ=255) aTAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGttt > 1:1819747/1‑100 (MQ=255) aaagaaagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGga > 2:1540263/1‑100 (MQ=255) aaagaaagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGga < 1:578332/100‑1 (MQ=255) aagaaagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGgat < 1:1956577/100‑1 (MQ=255) aaagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGgatgat < 1:1302953/100‑1 (MQ=255) aaagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGgatgat < 2:835616/100‑1 (MQ=255) aagGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGatt < 2:321195/100‑1 (MQ=255) agGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGatta < 2:1489110/100‑1 (MQ=255) agGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGatta < 1:81746/100‑1 (MQ=255) agGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGatta < 1:52567/100‑1 (MQ=255) aaTTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGattaatta > 1:453007/1‑100 (MQ=255) aTTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAg < 2:1142677/100‑1 (MQ=255) aTTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGAATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAg < 2:180513/100‑1 (MQ=255) tAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCa < 2:266380/100‑1 (MQ=255) aaTCTTGATTTTGTTTATATAACATCTTTTCCTTTTGCGAAAAGTTCATAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCAt < 2:1379988/100‑1 (MQ=255) aaTCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCAt > 2:107621/1‑100 (MQ=255) aTCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATa < 2:1593629/100‑1 (MQ=255) tCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATaa > 2:1147793/1‑100 (MQ=255) cTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAg < 1:2039453/100‑1 (MQ=255) cTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAg < 2:887243/100‑1 (MQ=255) tccgatcttATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATc < 1:683498/93‑1 (MQ=255) aTTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATc > 2:125931/1‑100 (MQ=255) tttGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCgg > 1:1000476/1‑100 (MQ=255) tttGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCgg < 1:861840/100‑1 (MQ=255) gTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTg < 1:1958809/100‑1 (MQ=255) tttATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGa < 2:1671240/100‑1 (MQ=255) tatataAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATcagatcgga > 2:683496/1‑92 (MQ=255) tatataAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAg < 1:117406/100‑1 (MQ=255) tatataAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAg > 1:362963/1‑100 (MQ=255) tatataAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAg < 2:595423/100‑1 (MQ=255) gatctaAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAg < 2:820609/96‑1 (MQ=255) ataAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTc < 2:1129360/100‑1 (MQ=255) taACATCTTTTCTTAATGGGAAAAGTGCCTAATGGCATGTTTACACCATATTCTGTTAGATTGAAGGTGATTAATTAGCATAAGAATCGGATAAAggt > 2:1304485/1‑96 (MQ=255) taAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGatgatgg > 2:1994273/1‑94 (MQ=255) taAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCt < 1:2001739/100‑1 (MQ=255) taAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCt > 1:1238559/1‑100 (MQ=255) aaaaTCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAgagatc > 1:820612/1‑95 (MQ=255) aaaaTCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCta > 2:1017074/1‑100 (MQ=255) aaaaTCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCta > 1:1051219/1‑100 (MQ=255) aaaaTCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCta < 1:1450595/100‑1 (MQ=255) aaaaTCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTGCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCta > 2:1433673/1‑100 (MQ=255) cttttcttttTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTg < 1:1439511/100‑1 (MQ=255) cttttcttttTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTg < 1:584180/100‑1 (MQ=255) cttttcttttTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTg < 1:676654/100‑1 (MQ=255) cttttcttttTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTg < 2:612259/100‑1 (MQ=255) cttttTGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAttt > 1:143075/1‑100 (MQ=255) tttttGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAtttt > 1:223332/1‑100 (MQ=255) tttttGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAtttt < 1:778518/100‑1 (MQ=255) tttttGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAtttt > 2:757948/1‑100 (MQ=255) tttGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAtttttt < 2:362962/100‑1 (MQ=255) ttGTGAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAttttttt < 2:1209844/100‑1 (MQ=255) atctgAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAttttttt < 1:1422812/97‑1 (MQ=255) gtgAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTc < 1:1748338/100‑1 (MQ=255) tgAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCt > 1:685545/1‑100 (MQ=255) tgAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCt < 2:1238553/100‑1 (MQ=255) gAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCAtttttttagat > 2:1422803/1‑96 (MQ=255) gAAAAGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCtt > 1:643035/1‑100 (MQ=255) aaaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGt > 1:491151/1‑100 (MQ=255) aaaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGt > 1:488813/1‑100 (MQ=255) aaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTc < 1:296766/100‑1 (MQ=255) aaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTc < 1:835299/100‑1 (MQ=255) aaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTc < 2:877355/100‑1 (MQ=255) aaGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTc < 1:107622/100‑1 (MQ=255) aGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCa < 1:1017079/100‑1 (MQ=255) aGTTCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCa < 2:1666206/100‑1 (MQ=255) tCCTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCatat > 1:950212/1‑100 (MQ=255) ccTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATc > 1:604753/1‑100 (MQ=255) ccTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATc < 1:29084/100‑1 (MQ=255) cTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCt > 2:533262/1‑100 (MQ=255) cTAAGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCt > 2:1272507/1‑100 (MQ=255) aaGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCttt < 1:1612523/100‑1 (MQ=255) aGCGCATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCtttt < 2:1050748/100‑1 (MQ=255) gcgcATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTTTCAtttttttt > 2:1292388/1‑99 (MQ=255) gcgcATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCttt > 2:1241874/1‑98 (MQ=255) gcgcATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTg < 2:488812/100‑1 (MQ=255) gcgcATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTg < 2:491150/100‑1 (MQ=255) cgcATTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGa > 2:1293650/1‑100 (MQ=255) gcATTTTTATACCATGTTATTTTAGTTTCAGTATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTg < 2:1816350/98‑1 (MQ=255) aTTTTTATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGAttc < 1:536922/100‑1 (MQ=255) tttATACCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGAttcttc < 2:1051214/100‑1 (MQ=255) aCCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCAc > 1:1998456/1‑100 (MQ=255) aCCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCAc < 2:441963/100‑1 (MQ=255) aCCATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCAc > 1:1923879/1‑100 (MQ=255) ccATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACt < 2:643033/100‑1 (MQ=255) ccATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACt > 1:975395/1‑100 (MQ=255) ccATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACt > 2:1646234/1‑100 (MQ=255) cATGTTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACt < 1:1364960/99‑1 (MQ=255) | TTATTACGAAATAAAAAAGAAAGGAAATTAATCTTGATTTTGTTTATATAAAATCTTTTCTTTTTGTGAAAAGTTCCTAAGCGCATTTTTATACCATATTATTTTAGTTTCAGGATGATTAATTAGCATAAGAATCGGTTGAAGTTCTATATTGCATTTTTTTTCTTGTCATATCTTTTGATTCTTCTGCACT > NC_000913/3799227‑3799419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |