BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	1,712,306:1	(T)_7→8	100%	intergenic (+148/‑463)	nth → / → dtpA	DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,712,299	1	.	T	100.0%	378.8 / NA	110	intergenic (+141/‑470)	nth/dtpA	DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)/dipeptide and tripeptide permease A
Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (53/57); total (53/57)

Only 100 of 133 total aligned reads displayed.

TTATCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCATTT  >  NC_000913/1712200‑1712393

  aTCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑tt                                                                                              >  1:870788/1‑100 (MQ=255)

  aTCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑tt                                                                                              >  2:3285743/1‑100 (MQ=255)

   tCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttt                                                                                             >  2:2002619/1‑100 (MQ=255)

   tCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACAAAAAATGCAGGTTAATTG‑‑ttt                                                                                             >  1:567724/1‑100 (MQ=255)

    ccTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑tttt                                                                                            >  2:2185693/1‑100 (MQ=255)

     ctctTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttt                                                                                           <  2:516651/100‑1 (MQ=255)

     ctctTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttt                                                                                           >  2:2835859/1‑100 (MQ=255)

      tctTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCTGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑tttttt                                                                                          <  1:2956971/100‑1 (MQ=255)

       ctTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAACAATGCAGGTTAATTG‑‑ttttttt                                                                                         >  1:1372706/1‑100 (MQ=255)

       ctTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttt                                                                                         <  2:2729983/100‑1 (MQ=255)

        ttttAAAACATCTTTTTAACGTCAATGATGCCATTGCATAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑tttttttt                                                                                        >  1:2282433/1‑99 (MQ=255)

         ttgaaaaCATCTTTTTATCGTCAATGATGCAATTGATTAGCGTTATCATGATTTTATCTGTAAAAAAAAAAAAAAAAATGCAGGTTAATTG‑‑tttttttta                                                                                       <  1:2439833/97‑3 (MQ=255)

           tAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttttaat                                                                                     >  2:2402349/1‑96 (MQ=255)

           tAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttttaat                                                                                     <  2:1618954/100‑5 (MQ=255)

           tAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttttaat                                                                                     >  1:978650/1‑96 (MQ=255)

            aaaaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttttaata                                                                                    >  2:2620187/1‑95 (MQ=255)

            aaaaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑ttttttttaata                                                                                    >  1:1495538/1‑95 (MQ=255)

             aaaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAg                                                                                    <  2:125758/100‑1 (MQ=255)

             aaaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAg                                                                                    >  2:1459499/1‑100 (MQ=255)

             aaaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAg                                                                                    <  1:1753484/100‑1 (MQ=255)

              aaCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGc                                                                                   <  1:4270052/100‑1 (MQ=255)

               aCATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCg                                                                                  <  2:2979863/100‑1 (MQ=255)

                cATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGa                                                                                 >  2:4118027/1‑100 (MQ=255)

                cATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGa                                                                                 >  1:3549859/1‑100 (MQ=255)

                  tCTATTTAACGTCAATGATGCAATTGATTAGCGTTATCATCAGGTAATTCGTTTAAAAAAAAAAAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGaaa                                                                               <  1:3193939/100‑1 (MQ=255)

                    tttttAACGTCAATGATGCCATTGCTTAGTGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAAtt                                                                             <  2:772450/100‑1 (MQ=255)

                    tttttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAAtt                                                                             >  1:183161/1‑100 (MQ=255)

                     ttttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAAttt                                                                            >  2:694011/1‑100 (MQ=255)

                     ttttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAAttt                                                                            >  1:751858/1‑100 (MQ=255)

                       ttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTc                                                                          >  2:1091606/1‑100 (MQ=255)

                       ttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTc                                                                          <  2:3337181/100‑1 (MQ=255)

                       ttAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTc                                                                          <  2:64790/100‑1 (MQ=255)

                          aCGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTat                                                                       >  1:3058900/1‑100 (MQ=255)

                           cGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTatt                                                                      >  1:3412182/1‑100 (MQ=255)

                           cGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTatt                                                                      >  2:509293/1‑100 (MQ=255)

                            gTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattc                                                                     <  2:249573/100‑1 (MQ=255)

                             tCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattca                                                                    >  2:3553337/1‑100 (MQ=255)

                             tCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattca                                                                    >  2:335179/1‑100 (MQ=255)

                              cAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattcat                                                                   >  2:820416/1‑100 (MQ=255)

                              cAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattcat                                                                   >  1:2170358/1‑100 (MQ=255)

                               aaTGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTattcatt                                                                  >  2:1009686/1‑100 (MQ=255)

                                 tgatgCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCg                                                                <  1:2904454/100‑1 (MQ=255)

                                 tgatgCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCg                                                                <  2:1162645/100‑1 (MQ=255)

                                 tgatgCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCg                                                                <  2:3549872/100‑1 (MQ=255)

                                 tgatgCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCg                                                                >  1:3355419/1‑100 (MQ=255)

                                     gCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGAt                                                            >  2:4163820/1‑100 (MQ=255)

                                     gCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGAt                                                            <  2:58406/100‑1 (MQ=255)

                                     gCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGAt                                                            >  1:2560291/1‑100 (MQ=255)

                                       cATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATc                                                           <  2:1232374/99‑1 (MQ=255)

                                       cATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCa                                                          <  2:3401792/100‑1 (MQ=255)

                                            cTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGACCAAGATc                                                     <  2:2246915/100‑1 (MQ=255)

                                             ttAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCa                                                    <  1:2413854/100‑1 (MQ=255)

                                              tAGCGTTATCATCAGGTAATCCGTTTGCTGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCa                                                    <  1:1940745/99‑1 (MQ=255)

                                              tAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCAc                                                   <  2:2043754/100‑1 (MQ=255)

                                               aGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACg                                                  >  2:4117055/1‑100 (MQ=255)

                                                gCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGa                                                 >  1:3027126/1‑100 (MQ=255)

                                                gCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGa                                                 >  2:13819/1‑100 (MQ=255)

                                                 cGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGAt                                                >  2:251967/1‑100 (MQ=255)

                                                 cGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGAt                                                <  2:293825/100‑1 (MQ=255)

                                                 cGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGAt                                                <  2:291773/100‑1 (MQ=255)

                                                   ttATCATCAGTCAATCGGTTTGAAAAAATAAAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGACATTTTCTATTCATTCGTGATCTTGATCACGaat                                               <  1:2566327/99‑3 (MQ=255)

                                                   ttATCATCAGGTAATCCGTTTAAAAAAAAAAAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGc                                              <  1:245468/100‑1 (MQ=255)

                                                     atcatcAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTg                                            <  1:1951147/100‑1 (MQ=255)

                                                       catcaGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTATTAGAGAACTTTTCTATTATTTCGTGATCGAGATAAAGTTGCTGt                                           >  1:936981/1‑99 (MQ=255)

                                                        atcaGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCg                                         <  2:3468668/100‑1 (MQ=255)

                                                        atcaGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCg                                         >  2:2622659/1‑100 (MQ=255)

                                                          caGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCa                                       >  2:2775616/1‑100 (MQ=255)

                                                           aGGTAATCCGTTTGAGAATAAACAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCaa                                      <  1:1537213/100‑1 (MQ=255)

                                                            agTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGTTATCGCatt                                     >  1:1735869/2‑98 (MQ=255)

                                                              tAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATg                                    <  1:3198290/99‑1 (MQ=255)

                                                               aaTCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTa                                  >  2:1207449/1‑100 (MQ=255)

                                                               aaTCCGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTATATTCATTCGTGATTAAGATCACGATGCTg                                            >  1:3378697/1‑90 (MQ=255)

                                                                  ccGTTTGCGGATAACCAAAAATGCAGGTTAATTGTTTTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTaaa                                >  2:3717444/1‑100 (MQ=255)

                                                                  ccGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTaaaa                               <  2:2282439/100‑1 (MQ=255)

                                                                   cGTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTaaaaa                              >  2:3628295/1‑100 (MQ=255)

                                                                    gTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAAc                             <  2:1785424/100‑1 (MQ=255)

                                                                    gTTTGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAAc                             <  1:3121775/100‑1 (MQ=255)

                                                                     tttGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACa                            <  2:3515236/100‑1 (MQ=255)

                                                                     tttGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACa                            <  2:873868/100‑1 (MQ=255)

                                                                       tGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACAtt                          <  2:870790/100‑1 (MQ=255)

                                                                       tGCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTAGCAATGTAAAAACAtt                          >  1:3329497/1‑100 (MQ=255)

                                                                        gCGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTg                         <  1:2874429/100‑1 (MQ=255)

                                                                         cGGATAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGc                        <  2:2650549/100‑1 (MQ=255)

                                                                            aTAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAg                     <  2:879258/100‑1 (MQ=255)

                                                                             tAACCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCGCGATGCTGTCGCAATGTAAAAACATTGCAAGa                    <  1:2889022/100‑1 (MQ=255)

                                                                              aaCCAAAAATGCAGGTTAATTGT‑TTTTTTTAATTTTGAAATTTTCTATTCATTCGTGATTAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGaa                   >  1:2110520/1‑100 (MQ=255)

                                                                               aCCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAAt                  >  2:756017/1‑100 (MQ=255)

                                                                               aCCAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAAt                  >  2:1185804/1‑100 (MQ=255)

                                                                                ccAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATc                 >  2:3694271/1‑100 (MQ=255)

                                                                                ccAAAAATGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATc                 >  2:2329449/1‑100 (MQ=255)

                                                                                 cAAAAATGCAGGTTAATTGT‑TTTTTTTTTTTTTTTTATTTTCTATTCATTCGTAATAAAAATTACGTTGCTGTCGTAATGTAAAATCATTTCAAGAATCa                >  1:3752862/1‑100 (MQ=255)

                                                                                    aaaTGCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGt             <  1:642080/100‑1 (MQ=255)

                                                                                        gCAGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTCTTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTaaa         <  2:4067951/100‑1 (MQ=255)

                                                                                          aGGTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAAt       <  2:3460540/100‑1 (MQ=255)

                                                                                           ggTTAATTGT‑TTTTTTTACTAGCGAAATTGTCTATTCAATTGTGATCAAGATCACGATACTGTTGGAATGTAAAAACATTGGAAGAAAAAAGATAAAATc      >  1:2631118/1‑100 (MQ=255)

                                                                                           ggTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAATc      <  2:2533917/100‑1 (MQ=255)

                                                                                            gTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCATGATGTTGTCTCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCa     >  1:785161/1‑100 (MQ=255)

                                                                                            gTTAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCa     <  2:2177617/100‑1 (MQ=255)

                                                                                             ttAATTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGAGCAAGATCACGATGCTGTCTCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCAt    <  1:2279790/100‑1 (MQ=255)

                                                                                               aaTTGT‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCAttt  <  1:1135927/100‑1 (MQ=255)

TTATCCTCTTTTAAAACATCTTTTTAACGTCAATGATGCCATTGCTTAGCGTTATCATCAGGTAATCCGTTTGCGGATAACCAAAAATGCAGGTTAATTG‑‑TTTTTTTAATAGCGAAATTTTCTATTCATTCGTGATCAAGATCACGATGCTGTCGCAATGTAAAAACATTGCAAGAATCAGGTTAAAATCATTT  >  NC_000913/1712200‑1712393

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`