| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2750110 | 115 (0.750) | 20 (0.140) | 10/162 | NT | 15.1% | intergenic (+50/+5) | yfjD/grpE | UPF0053 family inner membrane protein/heat shock protein |
| ? | NC_000913 | = 2750123 | 121 (0.870) | coding (586/594 nt) | grpE | heat shock protein | |||||
ATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2750004‑2750110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagcaAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAGG < NC_000913/2750123‑2750025 ATTAAGGAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTAC < 1:126556/100‑1ATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGCGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTAC < 2:2994729/100‑1 TTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACG < 2:3553796/100‑1 TAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCGGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTAC < 1:3204320/98‑1 AAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAA < 2:44185/100‑1 AAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAA < 1:921673/100‑1 AAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAA > 1:3524718/1‑100 AGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAA > 1:2417390/1‑100 AGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAA > 1:704991/1‑100 GCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAG < 1:1196832/100‑1 GCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAG > 2:3768525/1‑100 GCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAG < 2:3023352/100‑1 GCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAG > 2:1754618/1‑100 CAGGTAAAAGTTTATCCTGTGAAACCGCTGCACGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGC > 2:2881112/1‑100 GGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAA > 2:982668/1‑100 TTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAAT > 1:1049344/1‑100 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 1:297850/100‑1 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 2:4015516/100‑1 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 1:2180659/100‑1 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 1:2746525/100‑1 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 1:2880749/100‑1 ACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 1:978541/100‑1 CCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTA < 2:385931/100‑1 CCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTA < 2:899856/100‑1 CCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTA < 2:661688/100‑1 CCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTA < 1:2201459/100‑1 CCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGT < 2:331943/99‑1 GCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAAT < 1:982665/100‑1 CTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATA < 2:1049347/100‑1 GCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAACAGCTTAATTTCTGCTTTCGTAATAAT < 2:2604669/100‑1 GCGAGAGTGTGGCGGAGTAACGAAAACGTCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCGTTCGTA < 1:1588793/93‑1 CGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCA < 2:1391136/100‑1 GAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCAC < 1:855069/100‑1 GAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGG < 2:818762/100‑1 GGCCGTGAATTATTACGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACAC > 1:2967096/1‑100 CGAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTT < 1:4067487/100‑1 GAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTT > 2:423446/1‑100 GAAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTT > 2:3735314/1‑100 AAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTC < 2:2187469/100‑1 AAAGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTC < 1:82052/100‑1 AGCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCAC > 2:4165122/1‑100 GCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACA > 2:3282232/1‑100 GCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACA > 2:3972110/1‑100 GCAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACA > 1:3973278/1‑100 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGTCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG < 2:307842/100‑1 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG > 2:280693/1‑100 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG < 2:2609779/100‑1 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG < 2:190466/100‑1 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG < 2:1529019/100‑1 CAAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAG > 2:1352845/1‑100 AAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAGG < 2:4226306/100‑1 AAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAGG > 1:3940662/1‑100 ATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAACGAAAACGGCCCGGCATTCGCATGCAGGGCCGTGAATTATTACGAAAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2750004‑2750110‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaaagcaAAAGCTTAATTTCTGCTTTCGTAATAATTCACGGCCCTGCATGCGAATGCCGGGCCGTTTTCGTTACTCCGCCACACTCTCGCGCAGCGGTTTCACAGG < NC_000913/2750123‑2750025 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |