| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4619938 | 160 (1.040) | 4 (0.030) | 4/166 | NT | 2.6% | coding (336/1224 nt) | deoB | phosphopentomutase |
| ? | NC_000913 | = 4619964 | 154 (1.080) | coding (362/1224 nt) | deoB | phosphopentomutase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4619834‑4619938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtttTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGGACACCGGCAATTTCCCAGTGACCAGACGGGGTATCTTTACCGGATGACATTTCGTGCGCC < NC_000913/4619964‑4619866 GGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTTGGAAATTGCCGGTGTCCCGGTTC < 2:1811695/100‑1GGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTC < 2:2360859/100‑1GGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTC < 1:2834348/100‑1 GCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCT < 1:1787337/100‑1 GCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCT > 1:2057729/1‑100 GCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCT > 1:2969255/1‑100 GCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCT > 2:1344126/1‑100 CAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTG < 1:242924/100‑1 ACGCTGAAGTTACGGGCGCGTTCGCATGGGCGCAGGAAATGTCAGTCGGTAAAGATACCCCTTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGT < 1:1741221/99‑1 CGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTT > 1:1903567/1‑100 CGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTTCGTGATCGGAGAAATATCCCCACTCAAACAGA < 1:1726550/100‑1 AATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTTCGTGATCGGAGAAATATCCCCACTCAAACAGAACC < 2:397054/100‑1 ATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGACATTGCCGGTGTCCCGGTTCTGTTTTCGTGATCGGAGAAATATCCCCACTCAATCAGAACCG < 1:1216882/100‑1 GTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTTTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGG < 1:1799278/100‑1 CTGTTTTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGGACACCGGCAATTTCCCAGTGACCAGACGGGGTATCTTTACCGGATGACATTTCG > 1:1212913/1‑99 TGTTTTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGGACACCGGCAATTTCCCAGTGACCAGACGGGGTATCTTTACCGGATGACATTTCGTG > 2:375890/1‑100 TTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGGACACCGGCAATTTCCCAGTGACCAGACGGGGTATCTTTACCGGATGACATTTCGTGCGCC > 2:2057573/1‑100 GGCAACGCTGAAGTTATCGGCGCGTACGCATGGGCGCACGAAATGTCATCCGGTAAAGATACCCCGTCTGGTCACTGGGAAATTGCCGGTGTCCCGGTTCTGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4619834‑4619938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtttTCGTGATCGGAGAAATATCCCCACTCAAACAGAACCGGGACACCGGCAATTTCCCAGTGACCAGACGGGGTATCTTTACCGGATGACATTTCGTGCGCC < NC_000913/4619964‑4619866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |