| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4625174 = | 213 (1.390) | 8 (0.060) | 4/166 | NT | 4.0% | coding (280/969 nt) | serB | 3‑phosphoserine phosphatase |
| ? | NC_000913 | 4625219 = | 181 (1.260) | coding (325/969 nt) | serB | 3‑phosphoserine phosphatase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGC < 2:1503992/100‑1ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGC > 2:2863151/1‑100ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGC > 2:3704148/1‑100 TCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCT > 2:1712803/1‑100 TCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCT > 1:1640331/1‑100 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC < 1:1823992/100‑1 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC < 1:274863/100‑1 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC > 2:4186689/1‑100 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC < 2:3012793/100‑1 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC < 1:1381315/100‑1 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC > 2:1305544/1‑100 AATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGC > 2:608982/1‑100 AATACACTCAATCTGGATGGCGGTGGAGTCCAAATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTG < 1:3838594/99‑1 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG < 2:3905599/100‑1 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG < 2:3401855/100‑1 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG < 2:2307552/100‑1 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG < 1:1256511/100‑1 ATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCG > 1:2979992/1‑100 CCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATT > 2:2760221/1‑100 GGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGA > 1:121320/1‑100 CGTGCGCAGGTGCGGGATTTTCGCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGATTGCTGGTGATGGATATGGGCGCCACCGCCATCCAGACTGCAT > 1:925110/1‑100 CGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGCTATGGACTCCACCGCCATCCAGATTGAAT > 1:2038354/1‑100 GTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGGCATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATG > 1:2820554/1‑100 GTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATG > 2:1681124/1‑100 GTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATG > 1:1533723/1‑100 GTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGCACGCCGGGTTTGCTGGGGATGGATATGGACTCCACCGCCATCCAGATTGAATG > 2:1907852/1‑100 TGCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGTCAAACTGGCCGGAACGGGCGAGATGGT > 2:147824/1‑100 GCGCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTG > 1:4199737/1‑100 GCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGC < 2:3284071/100‑1 GCACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGC < 2:842891/100‑1 CACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG < 2:2514655/100‑1 ATCAATACATTCAATCTGGATGGCGGTGGAGTCCATATCCATCACCAGCAAACCCGGCGTGCGCAGGTGCGGGATTTTCCCCAGCGGGGCGACATCCAGCTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4625278‑4625174‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcACGCCGGGTTTGCTGGTGATGGATATGGACTCCACCGCCATCCAGATTGAATGTATTGATGAAATTGCCAAACTGGCCGGAACGGGCGAGATGGTGGCG > NC_000913/4625219‑4625317 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |