New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662311 =NA (NA)13 (0.090) 9/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 216 total aligned reads displayed.

GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410
                                                                                                   |                                                                                                   
gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     >  2:3391114/1‑100 (MQ=255)
 aCATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCg                                                                                                    <  2:2320933/100‑1 (MQ=255)
 aCATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCg                                                                                                    <  2:3029659/100‑1 (MQ=255)
  gtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCgg                                                                                                   <  2:144035‑M1/3‑1 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:4056371‑M1/97‑100 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  1:294368‑M1/97‑100 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  1:1370716‑M1/97‑100 (MQ=255)
    ttCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTCCAGCGCCATTTTTTTATCGTGGCGTTTGTAACTGTTGTCGGAt                                                                                                 >  2:1053565/1‑100 (MQ=255)
    aggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGAt                                                                                                 >  2:4124054‑M1/96‑100 (MQ=255)
     tCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATg                                                                                                <  2:2698248/100‑1 (MQ=255)
     tCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATg                                                                                                <  2:2363036/100‑1 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  2:3127512/1‑100 (MQ=255)
       ccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcg                                                                                              >  2:4046431/1‑100 (MQ=255)
        ctaGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcgg                                                                                             <  1:2535718/98‑1 (MQ=255)
        cGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcgg                                                                                             >  1:76867/1‑100 (MQ=255)
         gAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcgg                                                                                             <  1:3919448/99‑1 (MQ=255)
            tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                         <  1:565574/100‑1 (MQ=255)
             aaaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGa                                                                                        >  1:904036/1‑100 (MQ=255)
             aaaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGa                                                                                        <  1:1057302/100‑1 (MQ=255)
             aaaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGa                                                                                        >  1:1914467/1‑100 (MQ=255)
                 tGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                    >  2:3850350/1‑100 (MQ=255)
                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   <  1:4124105/100‑1 (MQ=255)
                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   >  2:2754194/1‑100 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  <  2:2834594/100‑1 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  2:239547/1‑100 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  <  2:3763355/100‑1 (MQ=255)
                     cAAATATTTACTTGACTGATTTAGTCGGGTATTTAATCTTCAGTGCGGTTTTTTTATAGTGGGTTTTGTATATGTTTTAGGATGTGTCGTGAACgtcgta                                                                                >  1:1325424/1‑95 (MQ=255)
                      aaCTATTTACTTGACTGTTTTAGTCGGGTATTTACCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                    <  1:1737958/95‑1 (MQ=255)
                       aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  2:1393723/1‑100 (MQ=255)
                        cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATcc                                                                             <  1:132941/100‑1 (MQ=255)
                         tATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCg                                                                            >  1:1465124/1‑100 (MQ=255)
                          cgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGc                                                                           >  2:3789846‑M1/74‑100 (MQ=255)
                          aTTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGc                                                                           >  2:337731/1‑100 (MQ=255)
                          aTTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGc                                                                           <  2:3532210/100‑1 (MQ=255)
                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:999814‑M1/73‑100 (MQ=255)
                            ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                         <  2:764040/100‑1 (MQ=255)
                               cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                      >  1:3174942/1‑100 (MQ=255)
                               cTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgg                                                                      <  1:4140489/100‑1 (MQ=255)
                                  acagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGt                                                                   >  1:499246‑M1/66‑100 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 >  1:1387598/1‑100 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  1:1966054/100‑1 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  1:2122184/100‑1 (MQ=255)
                                      gagttAGTCGGGTATTTAACCGTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  2:180132/97‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAGCCTTCTGTGGCATTTTTTTATCGTGGCGTTTGTACCTGTGGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:2350477/100‑1 (MQ=39)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCt                                                                >  1:2394025/1‑99 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  2:2019422/100‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:3357639/100‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:1795986/100‑1 (MQ=255)
                                       aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              >  2:2337711/1‑100 (MQ=255)
                                       aTTTAGTCGGGTATTTAACCTACAGTGCCATTTTTTTATCGTGGCGTTTGTACCGGTTGTCGGATGCGGCGTGAACGCCATATCAGCCCTGGGGTTCTg                                                               <  1:1174967/99‑1 (MQ=255)
                                        tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTa                                                             <  2:1950478/100‑1 (MQ=255)
                                         ttAGTCGGGTATTTAACCCTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTACGGTTCTGttc                                                            <  1:3127500/100‑3 (MQ=37)
                                           aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                          <  2:2998526/100‑1 (MQ=255)
                                           aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                          <  2:4256964/100‑1 (MQ=255)
                                            ntCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  1:1532820/2‑100 (MQ=255)
                                             tCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTg                                                        >  2:3083787/1‑100 (MQ=255)
                                             tCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTg                                                        <  2:566245/100‑1 (MQ=255)
                                              cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  2:2758307/1‑100 (MQ=255)
                                               gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTATGTACACTGTa                                                      >  2:4095374/1‑100 (MQ=255)
                                                 gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                      >  1:3544106/1‑98 (MQ=255)
                                                 gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                    <  1:943418/100‑1 (MQ=255)
                                                   cgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATATGGCGTTCACGCCGCATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                  <  2:2569858‑M1/52‑1 (MQ=255)
                                                    tttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcat                                                 >  1:398997/1‑98 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGGCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  1:2881319/1‑100 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  1:1603768/1‑100 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  2:3990336/1‑100 (MQ=255)
                                                       aaCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGAt                                              <  1:24558/100‑1 (MQ=255)
                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             <  2:3941267/100‑1 (MQ=255)
                                                           ttCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGa                                          <  2:1321685/100‑1 (MQ=255)
                                                            tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         <  1:3981255/100‑1 (MQ=255)
                                                             cAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACg                                        >  2:778044/1‑100 (MQ=255)
                                                               gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACGCTGTAGGCCTGATAAGACGc                                       <  1:3842986/99‑1 (MQ=255)
                                                                 gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCTTATCCGCCCTGCGATTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    >  1:782178/1‑100 (MQ=255)
                                                                  ccATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTa                                   <  1:1071796/100‑1 (MQ=255)
                                                                   cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  2:649587/1‑100 (MQ=255)
                                                                    aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  2:2629548/1‑100 (MQ=255)
                                                                    aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  2:3799089/1‑100 (MQ=255)
                                                                       tttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcgcg                               <  1:3008041/99‑1 (MQ=255)
                                                                       tttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGt                              >  2:1081947/1‑100 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             >  2:890608/1‑100 (MQ=255)
                                                                         tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTTGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  1:2003666/99‑1 (MQ=255)
                                                                          ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                           >  1:2817341/1‑100 (MQ=255)
                                                                            aTCGTGGCGTTTGTACCTGTTGTCGGATGCGGCATGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAt                         >  2:1372344/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCan                      <  1:40086/100‑2 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      <  2:1668013/100‑1 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      <  2:1838624/100‑1 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:1610890/1‑100 (MQ=255)
                                                                                tGGCGTTTGTACCTGTTGTCGGATGCGGCGTGACCGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAgg                     <  2:1309322/100‑1 (MQ=255)
                                                                                tGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAgg                     <  1:2764467/100‑1 (MQ=255)
                                                                                   cGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCaa                  >  2:1702292/1‑100 (MQ=255)
                                                                                       tGTACCTGTTGTCGGATGGGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              <  1:2724179/100‑1 (MQ=255)
                                                                                         tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg            <  2:2153281/100‑1 (MQ=255)
                                                                                          aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  2:2190762/1‑100 (MQ=255)
                                                                                           ccTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTc          <  1:2683793/100‑1 (MQ=255)
                                                                                            cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGGTCTGTACACTGTAGGCGTGATAAGACGCATTACGCGTCGCCTCGGGGAACGGc              >  1:3735818/1‑95 (MQ=17)
                                                                                             tgttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg         >  2:3636911/1‑99 (MQ=255)
                                                                                              gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       >  2:2906400/1‑100 (MQ=255)
                                                                                               tcgtCGGCTGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       <  1:3286551/97‑1 (MQ=255)
                                                                                                  tCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt      >  1:1103300/1‑97 (MQ=255)
                                                                                                   CGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgcgg  >  1:1085279‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.