New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326350NA (NA)14 (0.100) 10/164 NT NA noncoding (549/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 272 total aligned reads displayed.

GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTC  >  NC_000913/4326251‑4326449
                                                                                                   |                                                                                                   
 ccGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTg                                                                                                    >  2:3350136‑M1/1‑99 (MQ=255)
    gATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccg                                                                                                 <  2:806363‑M1/100‑5 (MQ=255)
    gATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccg                                                                                                 <  1:3310836‑M1/100‑5 (MQ=255)
       gcggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccgga                                                                                               <  1:636547‑M1/99‑7 (MQ=255)
        cggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCCGGCAACGGTGCCAGATg                                                                                             <  1:1010800/100‑1 (MQ=11)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgc                                                                                            >  1:3866460/1‑100 (MQ=255)
         ggcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATg                                                                                             >  2:2268028/1‑99 (MQ=40)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcg                                                                                           >  2:2750499/1‑100 (MQ=255)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcg                                                                                           <  1:2295994/100‑1 (MQ=255)
          gcgTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATgcg                                                                                           >  1:2032818/1‑100 (MQ=40)
                   ccTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTAgccggataaggcgctcgcg                                                                                  >  1:1078662‑M1/1‑81 (MQ=255)
                    cTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAgcgc                                                                                 >  2:921657/1‑100 (MQ=255)
                     ttATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGcc                                                                                <  1:3660032/100‑1 (MQ=255)
                      tATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCt                                                                               <  2:1135339/100‑1 (MQ=255)
                      tATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCt                                                                               <  1:2876086/100‑1 (MQ=255)
                       aTCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCtt                                                                              <  2:1373883/100‑1 (MQ=255)
                        tCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGcc                                                                                <  1:512364/97‑1 (MQ=255)
                        tCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTA                                                                             >  2:2401287‑M2/1‑100 (MQ=255)
                         ccGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTAT                                                                            <  2:4154194‑M2/100‑1 (MQ=255)
                         ccGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTAT                                                                            <  2:2160392‑M2/100‑1 (MQ=255)
                            gCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCG                                                                         >  2:4029773‑M2/1‑100 (MQ=255)
                             ccTACGGATGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccgg                                                                        <  2:1888440‑M1/100‑30 (MQ=255)
                             ccTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGG                                                                        <  2:2010030‑M2/100‑1 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggc                                                                       <  1:90592‑M1/100‑31 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccgg                                                                        <  1:1390928‑M1/99‑30 (MQ=255)
                              cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGG                                                                        >  2:835560‑M2/1‑99 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACGGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                      >  1:1886652/1‑100 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                      >  1:2752191/1‑100 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                      >  2:1566370/1‑100 (MQ=255)
                               tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                       <  1:2470223‑M2/99‑1 (MQ=255)
                                aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaa                                                                     <  1:4221927‑M1/100‑33 (MQ=255)
                                aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCtt                                                                     <  2:3900565/100‑1 (MQ=255)
                                aCGGAGGGTGCGAGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCtt                                                                     <  1:1054813/100‑1 (MQ=255)
                                 cGGTGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTgccggataaggcgctcgcgccgcatccggcaac                                                                    <  1:3833710‑M1/100‑34 (MQ=255)
                                 cGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTa                                                                    >  2:666473/1‑100 (MQ=255)
                                   gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                  >  2:4176399/1‑100 (MQ=255)
                                   gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                  <  2:3690369/100‑1 (MQ=255)
                                   gAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTAcc                                                                  <  1:4039302/100‑1 (MQ=255)
                                      ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt                                                               <  2:1200147/100‑1 (MQ=255)
                                       gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATc                                                              <  2:1227452/100‑1 (MQ=255)
                                         gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                            <  2:55572/100‑1 (MQ=255)
                                          cGGGAATTTTTAGGCCTGACATGACGCGCAAGCGTCGCCTCAGGCATTTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATc                                                              <  1:3415079/97‑1 (MQ=17)
                                          cGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcaca                                                           >  2:726811/1‑100 (MQ=255)
                                           gggAATTTGGAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCAGCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaa                                                          <  2:2496182/100‑1 (MQ=255)
                                            ggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaat                                                         >  2:1665672/1‑100 (MQ=255)
                                             gAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaata                                                        >  1:4075343/1‑100 (MQ=255)
                                                tttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatacaa                                                     <  1:94785/100‑1 (MQ=255)
                                                  tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                   >  1:1586756/1‑100 (MQ=255)
                                                  tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                   <  1:1356190/100‑1 (MQ=255)
                                                   gTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCa                                                  <  2:2829733/100‑1 (MQ=255)
                                                     aGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGt                                                >  2:783958/1‑100 (MQ=255)
                                                     aGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGt                                                <  1:3367936/100‑1 (MQ=255)
                                                      ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                               >  1:1214288/1‑100 (MQ=255)
                                                        ccTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCt                                             >  2:2079172/1‑100 (MQ=255)
                                                          tGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttt                                           <  1:4117735/100‑1 (MQ=255)
                                                            aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                         <  1:2071126/100‑1 (MQ=255)
                                                            aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                         <  2:3283192/100‑1 (MQ=255)
                                                            aTAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCttttt                                         <  1:3706889/100‑1 (MQ=255)
                                                             tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                        <  1:3149395/100‑1 (MQ=255)
                                                             tAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                        <  1:3493937/100‑1 (MQ=255)
                                                              aaGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGATCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                       <  1:3433267/100‑1 (MQ=255)
                                                              aaGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                       >  2:3534334/1‑100 (MQ=255)
                                                              aaGACGCCCAAACGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                       >  1:2232303/1‑100 (MQ=255)
                                                               aGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                      <  2:3140442/100‑1 (MQ=255)
                                                                gACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcaca                                     <  1:478154/100‑1 (MQ=255)
                                                                 aCGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaa                                    <  1:2130310/100‑1 (MQ=255)
                                                                  cgcgCAAGCGTTGCATCAGGCATTTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcac                                      <  1:1960051/97‑1 (MQ=255)
                                                                  cgcgCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGCTCACAATACAATCAGTTCTTTTTCACaaa                                   >  2:538976/1‑100 (MQ=255)
                                                                  cgcgCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                   <  1:2211077/100‑1 (MQ=255)
                                                                  cgcgCAAGCGTCGCATCAGGCAGTCGGCACCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTcagatc                                   >  1:1969351/1‑96 (MQ=14)
                                                                    cgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACt                                 <  1:3261889/100‑1 (MQ=255)
                                                                    cgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACt                                 <  2:1080282/100‑1 (MQ=255)
                                                                    cgcAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACt                                 >  2:3612947/1‑100 (MQ=255)
                                                                      cAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCa                               <  2:1515301/100‑1 (MQ=255)
                                                                          cGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                           >  1:3610196/1‑100 (MQ=255)
                                                                           gTCGCATCAGGCATCTGGCACCATTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                           >  1:2479613/1‑99 (MQ=255)
                                                                              gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                       <  2:2470229/100‑1 (MQ=255)
                                                                              gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                       <  1:1709438/100‑1 (MQ=255)
                                                                              gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                       <  1:2647869/100‑1 (MQ=255)
                                                                              gCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAg                       >  2:2575709/1‑100 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGGCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGCTCACAATACAATCGGTTCTTTTTCACAGACTCAGATTTCAGt                      >  1:1416433/1‑100 (MQ=38)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                      >  1:4171150/1‑100 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                      >  1:728409/1‑100 (MQ=255)
                                                                               cATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGt                      >  2:468621/1‑100 (MQ=255)
                                                                                 tCAGGCATCTGGCATCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGttt                    <  1:2914886/100‑1 (MQ=255)
                                                                                  cAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTc                   >  1:4148022/1‑100 (MQ=255)
                                                                                   aGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCa                  <  2:3033148/100‑1 (MQ=255)
                                                                                    ggCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCAt                 <  1:3595869/100‑1 (MQ=255)
                                                                                        tCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGa             <  2:107173/100‑1 (MQ=255)
                                                                                         cTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAc            <  1:3766225/100‑1 (MQ=255)
                                                                                          tGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGAcc           >  2:1748254/1‑100 (MQ=255)
                                                                                            ggactGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCcacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcacc         <  2:2890670‑M2/98‑63 (MQ=255)
                                                                                            gCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGCTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCaa         >  1:2999672/1‑100 (MQ=255)
                                                                                              aCCGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCaacggtgccgactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccct       <  2:3872070‑M2/100‑65 (MQ=255)
                                                                                              aCCGTTGCCGGATGCGGCGCGAGCGCCTTATCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctc      <  2:1909550‑M2/100‑66 (MQ=255)
                                                                                               ccGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAAc      >  1:2373829/1‑100 (MQ=255)
                                                                                                cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctcc     <  2:3173402‑M2/100‑67 (MQ=255)
                                                                                                cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgagcgtcttatcaggcctacaaattcccgcaccctcc     <  1:149607‑M2/100‑67 (MQ=255)
                                                                                                 gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccg    <  2:4108182‑M2/100‑68 (MQ=255)
                                                                                                 gTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccg    <  1:2044639‑M2/100‑68 (MQ=255)
                                                                                                   |                                                                                                   
GCCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCATCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTC  >  NC_000913/4326251‑4326449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.