New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)15 (0.100) 9/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 234 total aligned reads displayed.

GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060
                                                                                                   |                                                                                                   
gATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAg                                                                                                     <  1:4003152/100‑1 (MQ=255)
    tATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTACCCGACTGATGCGACGCTGGTTTCGATTAACTAAGTGAAATATGTGAAAATTGTAGgcc                                                                                                  >  2:2111494‑M1/1‑96 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGGCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgg                                                                                                >  1:390458‑M1/1‑95 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGATAATGGTAGgacgg                                                                                                >  2:1775206‑M1/1‑95 (MQ=255)
     aTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccgg                                                                                                <  2:3958048‑M1/100‑6 (MQ=255)
       tgctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGAc                                                                                              <  2:2437486/100‑1 (MQ=255)
           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  1:2627295/100‑1 (MQ=255)
           gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                          <  1:2662550/100‑1 (MQ=255)
            cGGGCGACGGGGGGAGGGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGgc                                                                                         >  1:2041407/1‑100 (MQ=255)
             gggCGACGGGGGGCGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAACTTGTAGGCCGGACAAGgcg                                                                                        >  1:1699422/1‑100 (MQ=255)
              ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGTCGGACAAGgcgc                                                                                       <  2:2801838/100‑1 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgcg                                                                                  >  2:1887433/1‑100 (MQ=255)
                   cGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcac                                                                                   >  1:496140/1‑97 (MQ=255)
                     gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                <  2:2973450/100‑1 (MQ=255)
                     gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                <  1:1198832/100‑1 (MQ=255)
                      ggggAGTGTGTGTGTGAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  2:3010787/100‑1 (MQ=255)
                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  2:1399334/100‑1 (MQ=255)
                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  2:3139511/100‑1 (MQ=255)
                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               <  2:328602/100‑1 (MQ=255)
                      ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                               >  1:1635628/1‑100 (MQ=255)
                        ggtgtgtgtgtgtAAGCGTATACGACTGATGCGACGCTCTTTTCGATTAACTCAATGAAATATGTGAAAAGTGTAGGCCGGACAAGGCGCCCGcgcc                                                                                <  1:3136811/94‑1 (MQ=255)
                         gggtgtttgtgtAAGCGTATACTATTTAGGCGGCGCTGTTGTCGATTAACTAGATGATATTTTTGAAAATTGTATTCCGGACAAGCGGCTCGcgccn                                                                               <  1:2715107/95‑2 (MQ=255)
                          aGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATC                                                                           >  2:1666152‑M2/1‑100 (MQ=255)
                            tgtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCG                                                                         <  2:4176127‑M2/100‑1 (MQ=255)
                            tgtgtgtggAAGCGGTTATGATTGATGTTTCGTTTGTTTCGATTGACTGGATGAAATATGTGAAAATTGTATGCCGGACAAGGCGCGAGcgccttgt                                                                            <  1:3839748/97‑5 (MQ=255)
                              tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAAAGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGC                                                                       <  1:514287‑M2/100‑1 (MQ=255)
                               gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                      >  2:15917/1‑100 (MQ=255)
                               gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                      <  1:3663269/100‑1 (MQ=255)
                                tgtgtAAGCGTATACGACTGAGGCGACGGTGGTTTCGATTAACTAAATGAAGTATGTCAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt                                                                     <  1:4239263/100‑1 (MQ=38)
                                 gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                    >  2:342424/1‑100 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctac                                                                   <  2:1565504‑M1/100‑35 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggcctac                                                                   <  1:1615202‑M1/100‑35 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  1:3349935/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   <  2:3619089/100‑1 (MQ=255)
                                  tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                   >  2:3101414/1‑100 (MQ=255)
                                   gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgccggatgcggcgcgagcgccttgtccggccagat                                                                  >  1:310320‑M1/1‑65 (MQ=255)
                                    tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                 >  2:3768590/1‑100 (MQ=255)
                                     aaGCGTATACGAATGATGAGACGCTGGTTTCGATTAACTACATGAACTATGTGAAACTTGTCGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                <  1:1916857/100‑1 (MQ=37)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               >  1:2250306/1‑100 (MQ=255)
                                      aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                               <  2:2054418/100‑1 (MQ=255)
                                       gCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt                                                              >  2:1522182/1‑100 (MQ=255)
                                         gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                            <  2:4227874/100‑1 (MQ=255)
                                          tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                           >  2:2767176/1‑100 (MQ=255)
                                           ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                          >  1:2205238/1‑100 (MQ=255)
                                            taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGgtcggatgcggcgcgagcgccttgtccggcatacaattttcaga                                                         <  2:2890076‑M1/100‑45 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  1:83764/100‑1 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  1:3523840/100‑1 (MQ=255)
                                             aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                        <  2:2247318/100‑1 (MQ=255)
                                              cGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt                                                       <  2:2824111/100‑1 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    <  2:127745/100‑1 (MQ=255)
                                                 cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                    <  1:1401577/100‑1 (MQ=255)
                                                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                  <  2:1722893/100‑1 (MQ=255)
                                                   gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                  <  2:3165450/100‑1 (MQ=255)
                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAACTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                              <  1:2324275/100‑1 (MQ=255)
                                                       cGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGacac                                              >  1:1788989/1‑100 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  1:3265028/100‑1 (MQ=255)
                                                            cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                         <  2:1732115/100‑1 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       <  2:441370/100‑1 (MQ=255)
                                                              ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                       <  2:2945497/100‑1 (MQ=255)
                                                                tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa                                     >  2:577548/1‑100 (MQ=255)
                                                                 ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                    >  1:1977064/1‑100 (MQ=255)
                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaac                                  <  2:520185‑M2/100‑38 (MQ=255)
                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  <  2:1108368/100‑1 (MQ=255)
                                                                   cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCACTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                  >  2:2462266/1‑100 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             >  1:3496365/1‑100 (MQ=255)
                                                                        aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                             >  1:2399566/1‑100 (MQ=255)
                                                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                            >  1:2166215/1‑100 (MQ=255)
                                                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                            <  1:576121/100‑1 (MQ=255)
                                                                         aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                            <  1:2857205/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  2:1718052/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  2:1759743/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  2:514289/100‑1 (MQ=255)
                                                                          cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                           <  2:66578/100‑1 (MQ=255)
                                                                          cTAAACGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATATACTGTAGATGCCACTCATGCATACAGTATCGc                            >  1:924209/1‑99 (MQ=38)
                                                                           tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                          <  2:565800/100‑1 (MQ=255)
                                                                            ataTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  2:2891744/3‑100 (MQ=255)
                                                                            aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  1:3554244/1‑100 (MQ=255)
                                                                            aaaTGAAATATGTGAAAATTGTAGCCCGGACAAGGCGCTCGCGCAGCATACGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                         >  1:3417899/1‑100 (MQ=255)
                                                                              aTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTa                       >  2:751044/1‑100 (MQ=255)
                                                                                gAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                     >  2:533826/1‑100 (MQ=255)
                                                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt             >  1:2575239/1‑100 (MQ=255)
                                                                                        tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt             >  2:3995757/1‑100 (MQ=255)
                                                                                           aaaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc          >  2:3829075/1‑100 (MQ=255)
                                                                                            aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc          >  1:1335695/1‑99 (MQ=255)
                                                                                            aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa         <  1:722475/100‑1 (MQ=255)
                                                                                            aaTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa         <  1:3725369/100‑1 (MQ=255)
                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatctttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgctt        <  1:2508430‑M2/100‑64 (MQ=255)
                                                                                             aTTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg        <  1:361353/100‑1 (MQ=255)
                                                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttac      <  2:3024032‑M2/100‑66 (MQ=255)
                                                                                               tGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgc      <  1:3054748/100‑1 (MQ=255)
                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttaca     <  1:1503568‑M2/100‑67 (MQ=255)
                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATCCAGTATCGCCTGTACGCGCCAGTTATCAGgct     <  2:4061483/100‑1 (MQ=255)
                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct     <  2:4130507/100‑1 (MQ=255)
                                                                                                gTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct     <  1:914344/100‑1 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcattttgttaatcgaaaccagcgtcgcatcagtcgtataaacttac      <  1:941250‑M2/96‑66 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacagat  <  2:310322‑M2/100‑70 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacac  <  1:1674754‑M2/100‑70 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  2:1622267/1‑100 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct  >  2:2650885/1‑100 (MQ=255)
                                                                                                   ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAAgctgct  >  1:2107342/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCT  >  NC_000913/4415862‑4416060

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.