| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1636407 | 106 (0.690) | 21 (0.170) | 9/146 | NT | 18.0% | intergenic (‑40/‑349) | nohQ/ynfO | pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage |
| ? | NC_000913 | = 1636432 | 104 (0.830) | intergenic (‑65/‑324) | nohQ/ynfO | pseudogene, Qin prophage; Phage DNA packaging protein Nu1 family;Phage or Prophage Related; DNA packaging protein NU1 homolog from lambdoid prophage Qin/uncharacterized protein, Qin prophage | |||||
Only 100 of 199 total aligned reads displayed.
TGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGCC > NC_000913/1636309‑1636506 | tGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCAAAAAACAGAGAAAGGAAACGACaga > 2:1653051/1‑100 (MQ=255) gAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACagag > 2:1026589/1‑100 (MQ=255) gAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACagag < 1:2581064/100‑1 (MQ=255) aaTGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAgg < 2:3105730/100‑1 (MQ=255) aaTGGTACGGATACTCACACCGAAAATTTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAgg < 1:3368917/100‑1 (MQ=255) tACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGccc > 2:1373518/1‑98 (MQ=255) tACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCaa > 1:1223862/1‑100 (MQ=255) aCGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCaaa > 2:1580632/1‑100 (MQ=255) aTACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCt < 1:2381475/100‑1 (MQ=255) aTACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCt < 2:3429169/100‑1 (MQ=255) cTCGCACCGAAAATGTCAGCCAGCTGCTTTTTTTTTTTTTCTATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGt > 1:3429217/1‑100 (MQ=14) cTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCg > 1:2671569/1‑99 (MQ=255) cTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGt > 2:4070227/1‑100 (MQ=255) cGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGttt > 2:106497/1‑100 (MQ=255) gCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGtttt > 2:1996763/1‑100 (MQ=255) aCCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCa < 2:110437/100‑1 (MQ=255) ccGAAAATGTCAGCCGGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAg < 2:3339596/100‑1 (MQ=255) ccGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAg < 2:2247420/100‑1 (MQ=255) ccGAAAATGTCAGCCAGCTGCTTTTTGTTGACCTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAg < 1:3000627/100‑1 (MQ=255) gAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCa < 1:3852934/100‑1 (MQ=255) gAAAATGTCAGCAAGCTGCTTTTTGTTGACTTCCATTGTTCATTCTACGGCCACAAACAGAGAAAGGGAACGACGGCGGCCCAAAAGCTCGTTTTCAGCa > 1:2026412/1‑100 (MQ=17) gccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgttt > 2:3950470‑M1/1‑66 (MQ=255) gccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgttt < 2:2237942‑M1/100‑35 (MQ=255) gccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgttt < 1:4012055‑M2/100‑10 (MQ=255) gccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgttt < 1:1996899‑M1/100‑35 (MQ=255) gccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgttt < 2:1020688‑M1/100‑35 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttc < 1:3950451‑M1/100‑36 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttc < 2:2266405‑M1/100‑36 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttc > 1:881276‑M2/1‑90 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttc > 1:556888‑M2/1‑90 (MQ=255) ccagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttc < 2:169169‑M1/100‑36 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcc < 2:1245817‑M1/100‑37 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcc < 1:1940696‑M1/100‑37 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcc < 2:4170988‑M2/100‑12 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcc > 2:2572800‑M2/1‑89 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcc < 2:529919‑M1/100‑37 (MQ=255) cagcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcc < 2:2785025‑M1/100‑37 (MQ=255) cagcTACTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcc < 2:1490542‑M1/100‑37 (MQ=255) agcTGCTTTTTGTTGACTTCCATTTCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcct < 1:1570847‑M1/100‑38 (MQ=255) agcTGCTTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcct < 1:2006287‑M1/100‑38 (MQ=255) ctgctTTTTGTTGACTTCTATTGTTAATTCCACCGTCAAAAACAGAGAAAAGAAACGACAGAGGCCCAAAAGCTCGTTTTCATCACctctcgtttcctt > 1:742964‑M2/1‑86 (MQ=255) ctgctTTTTGTTGACTTCAATTGTTCATTTCACGGCCAAAAACAGATAAAGGAAACGACAAAGGCCAAAAAGCTCGTTTTCAGCACCTATCGTTTCttt > 1:1484254/1‑99 (MQ=14) tgctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttc < 2:2329444‑M1/100‑41 (MQ=255) ctTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGGCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttct > 1:3584253‑M2/1‑83 (MQ=255) ctTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcctttctc < 1:83401‑M1/100‑43 (MQ=255) ctTTTTGTTGACTTCCATTGCACATTCCACGGACAAAAACAGAGAAAGGAAACGACAGgtgctgaaagcgagctttttggcctctgtcgtttcctttctc < 2:2078858‑M1/100‑43 (MQ=255) tttttGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCctttcttt < 2:3465680/100‑1 (MQ=255) ttttGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctg < 2:1830122‑M1/100‑45 (MQ=255) tgttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAg < 1:2140333/100‑1 (MQ=255) gttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgg > 2:644434/1‑100 (MQ=255) gttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgg < 2:2361328/100‑1 (MQ=255) ccgatcTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgg < 1:843820/95‑1 (MQ=255) ttgACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAggg < 1:2067447/100‑1 (MQ=255) cTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAgggg > 1:1085519/1‑97 (MQ=255) tCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAggagatcgg > 2:843822/1‑93 (MQ=255) cATTGTTCATTCCACGGCGAAAAACAGAGAAAGGAAACGACAGAGGCCCACAAGCTCGTTTTCAGCGCCTGTCGTTTCCTTTCTTTTCAGGGGGGAtttt < 1:2341403/100‑1 (MQ=17) cATTCTTCATTCCACCGCCAAACACAGAGAAATGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCGTTCTTTTCAGGGGGTAtttt < 1:3922509/100‑1 (MQ=14) aTTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTta < 2:3648839/100‑1 (MQ=255) gtgcATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGGGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaat < 2:2488530/97‑1 (MQ=255) gTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaat > 1:517861/1‑100 (MQ=255) cATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaataaa > 2:4102469/1‑100 (MQ=255) cATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTtaaataaa > 1:2793959/1‑100 (MQ=255) aTTCCACGGCCAAAAAGAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAAGaaaa < 1:2526816/100‑1 (MQ=255) aTTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATaaaa > 2:328049/1‑100 (MQ=255) aTTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATaaaa > 2:2063416/1‑100 (MQ=255) ttCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATaaaaa > 2:2746564/1‑100 (MQ=255) ttCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATaaaaa > 1:456385/1‑100 (MQ=255) tCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAAc < 2:2677660/100‑1 (MQ=255) tCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAAc < 1:3984572/100‑1 (MQ=255) ccACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACa > 1:551041/1‑100 (MQ=255) ccACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACa > 2:781874/1‑100 (MQ=255) cACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAAc < 1:3334091/98‑1 (MQ=255) ggCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaag < 2:4106632‑M2/100‑48 (MQ=255) gCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAg < 2:3482096/100‑1 (MQ=255) cAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGtt > 1:1754647/1‑100 (MQ=255) aaaaaCAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTa > 1:1282196/1‑100 (MQ=255) aaaaaCAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTa > 1:3132515/1‑100 (MQ=255) aaaaCAGAGAAAGGAAACGACAGAGGCCCTAAAGCTCGTTTTCAGAACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTGTAAATAAAAACATTAAGTTa < 1:1610145/99‑1 (MQ=255) aaaaCAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTac > 2:2400900/1‑100 (MQ=255) agaAAGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagc < 2:1365823‑M1/100‑85 (MQ=255) aaaGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaagaa < 2:3979848/100‑1 (MQ=255) aaGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagc < 2:2876634‑M2/100‑63 (MQ=255) aGGAAACGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagct > 2:4012075‑M1/1‑12 (MQ=255) aGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaagaaga < 1:3566029/100‑1 (MQ=255) aGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACgaagaaga < 2:1843444/100‑1 (MQ=255) gAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAAc > 2:2836722/1‑100 (MQ=255) aaaCGACAGgtgctgaaaacgagcttttgggcctttgtcgtttcctttctctgtttttggccgtggaatgaacaataaaagtaaacaacaagtagctggc < 1:2241395‑M1/100‑92 (MQ=255) aaaCGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggc < 2:2192118‑M1/100‑92 (MQ=255) aaaCGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaaaaaaaaaaaaaaaaaagcagctggc < 1:1741969‑M1/100‑92 (MQ=255) aaaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACg < 2:1741974/100‑1 (MQ=255) aaaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACg < 1:3305784/100‑1 (MQ=40) aaCGACAGAGGCCCAAAAGCTCGTTTTCAGCACctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacataaagcagctggct < 1:3608443‑M2/100‑68 (MQ=255) cGACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctga > 2:379601‑M1/1‑6 (MQ=255) gACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctgac < 2:3798011‑M1/100‑96 (MQ=255) gACAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctgac < 2:4034321‑M1/100‑96 (MQ=255) gACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGaaa < 1:1424366/100‑1 (MQ=255) cAGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgttttttgccgtggaatgaacaatggaagtcaacaaaaagcagctggctgacat > 1:1653046‑M1/1‑3 (MQ=255) aGgtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctgacatt < 2:1456545‑M1/100‑99 (MQ=255) ggtgctgaaaacgagcttttgggcctctgtcgtttcctttctctgtttttggccgtggaatgaacaatggaagtcaacaaaaagcagctggctgacattt > 2:1574631‑M1/1‑1 (MQ=255) gagGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGcc > 2:3808643/1‑100 (MQ=255) | TGAATGGTACGGATACTCGCACCGAAAATGTCAGCCAGCTGCTTTTTGTTGACTTCCATTGTTCATTCCACGGCCAAAAACAGAGAAAGGAAACGACAGAGGCCCAAAAGCTCGTTTTCAGCACCTGTCGTTTCCTTTCTTTTCAGGGGGTATTTTAAATAAAAACATTAAGTTACGACGAAGAAGAACGGAAATGCC > NC_000913/1636309‑1636506 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |