BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2511352 =	NA (NA)	10 (0.070)	4/164	NT	NA	noncoding (1/88 nt)	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2511384 =	NA (NA)	10 (0.070)	4/164	NT	NA	noncoding (33/88 nt)	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP172 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 211 total aligned reads displayed.

CGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCC  >  NC_000913/2511285‑2511483

ctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                                                     >  1:4027246‑M1/68‑100 (MQ=255)

ctggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                                                     >  2:211732‑M1/68‑100 (MQ=255)

cGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                                                     >  1:2385585/1‑100 (MQ=255)

cGATCATCGCGGAAAAGGCCGGGGACATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGcc                                                                                                     >  1:1742275/1‑100 (MQ=255)

 gATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCt                                                                                                    >  1:1813454/1‑100 (MQ=255)

  ggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTa                                                                                                   >  1:374534‑M1/66‑100 (MQ=255)

  ggcactattggcggatgcggcgtaaacgccttatccgccctacgcgttaaagagccggtttgtagGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTa                                                                                                   >  2:267060‑M1/66‑100 (MQ=255)

   tcatcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTAc                                                                                                  <  2:2860696/100‑1 (MQ=255)

    catcGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACa                                                                                                 <  2:71789/100‑1 (MQ=255)

    catcGCGGAAAAGGCCGAGGTCATGCGCACCGCCATTCAACGCGTCCGCCAATGTAGCACAACGCCGGATGCGACGCTAGTGCGTCTTATCAGGCCt                                                                                                    <  1:3704407/97‑1 (MQ=37)

       cgcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAAc                                                                                              <  2:1088638/100‑1 (MQ=255)

        gcgGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAAcc                                                                                             <  1:4081163/100‑1 (MQ=255)

          ggAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCgg                                                                                           >  2:1440865/1‑100 (MQ=255)

          ggAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGACTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCgg                                                                                           >  2:1854311/1‑100 (MQ=255)

           gAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCGGGCCTACAAACCGGc                                                                                          >  2:1128530/1‑100 (MQ=255)

            aaaaGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGct                                                                                         >  2:236503/1‑100 (MQ=255)

             aaaGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGctc                                                                                        >  1:682067/1‑100 (MQ=255)

             aaaGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGctc                                                                                        <  2:3553464/100‑1 (MQ=255)

             aaaGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGctc                                                                                        <  2:892595/100‑1 (MQ=255)

             aaaGGCCGGGATCATGCGCCCCGCCATCAACCGCGTCCGCCAATGGAGCACATTCCCTGATCCGACGCTAGCCCGTCTTATCAGGCCTACAAACCGGctc                                                                                        <  1:1369443/100‑1 (MQ=25)

               aGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCtt                                                                                      <  1:2040093/100‑1 (MQ=255)

               aGGCCGGGGTCATGGGCACCGCCAGTAAGCGCGTCCGCCAATGTAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCtt                                                                                      <  1:3595845/100‑1 (MQ=255)

               aGGCCGGGGTCACGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCtt                                                                                      <  1:3687477/100‑1 (MQ=255)

                ggCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCttt                                                                                     >  2:1667211/1‑100 (MQ=255)

                ggCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCttt                                                                                     >  2:3641118/1‑100 (MQ=255)

                    ggggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcg                                                                                 <  2:1903255/100‑1 (MQ=255)

                    ggggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcg                                                                                 <  2:275410/100‑1 (MQ=255)

                    ggggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcg                                                                                 <  2:2797587/100‑1 (MQ=255)

                     gggTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGCCGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAAcgc                                                                                >  2:143309/1‑100 (MQ=255)

                         cATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAg                                                                            <  1:310954/100‑1 (MQ=255)

                         cATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAg                                                                            >  1:3293603/1‑100 (MQ=255)

                         cATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAg                                                                            >  2:1982521/1‑100 (MQ=255)

                          aTGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAgg                                                                           >  1:2860863/1‑100 (MQ=255)

                            gggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGc                                                                         >  1:2649619/1‑100 (MQ=255)

                             ggCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCg                                                                        >  2:817551/1‑100 (MQ=255)

                             ggCACCGCCAGTAACCGCGTCCGCCAATGGAGCACAATGCGTGATGCGACGCTAGTGCGTCTTAGCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCg                                                                        <  1:3787304/100‑1 (MQ=38)

                               cACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGa                                                                      <  1:282303/100‑1 (MQ=255)

                                aCCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGTCTCTTTAACGCGTAGGGCGGAt                                                                     <  1:2479182/100‑1 (MQ=255)

                                aCCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGAt                                                                     <  2:585214/100‑1 (MQ=255)

                                aCCGCCATTAAACGCGTCCGCAAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGAt                                                                     >  2:512265/1‑100 (MQ=255)

                                 ccGCCATTAAACGCGTCCGTCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATa                                                                    <  2:4058700/100‑1 (MQ=255)

                                 ccGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATa                                                                    >  2:2682684/1‑100 (MQ=255)

                                   gCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAg                                                                  <  2:2305501/100‑1 (MQ=255)

                                   gCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAg                                                                  <  1:808241/100‑1 (MQ=255)

                                    ccATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAgg                                                                 <  1:188994/100‑1 (MQ=255)

                                       ttAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGACTCTTTAACGCGTAGGGCGGATAAGGCGt                                                              >  2:3855589/1‑100 (MQ=255)

                                        tAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGtt                                                             <  1:3470901/100‑1 (MQ=255)

                                          aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCg                                                               >  1:3995288/1‑96 (MQ=255)

                                          aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGttt                                                            >  1:1007797/1‑99 (MQ=255)

                                          aaCGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTa                                                           >  1:2222345/1‑100 (MQ=255)

                                              cgTCCGCCAATGGAGCACAATGCCTGATTCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTAcgcc                                                       <  2:3461472/100‑1 (MQ=255)

                                                   gCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGGCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTAAAcgccttatc                                                  <  2:1061976/100‑6 (MQ=37)

                                                    ccAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATcc                                                 >  1:3504029/1‑100 (MQ=255)

                                                     cAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCg                                                >  2:1559334/1‑100 (MQ=255)

                                                      aaTGGCGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGc                                               <  2:1260316/100‑1 (MQ=255)

                                                       aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATGCGGCGTAAACGCCTTATCCGcc                                              <  1:4011239/100‑1 (MQ=25)

                                                       aTGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGcc                                              <  1:926078/100‑1 (MQ=255)

                                                          gAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAAt                                           >  1:4132238/1‑100 (MQ=255)

                                                            gCACAACGGCTGATGCGACGCTAGGGCGTCTTAGCAGGCCTACAAAGCGGCTCCTTAACGCGTAGGGCGGATGCGGCGTAAACGCCGTATcc                                                 <  1:1542427/92‑1 (MQ=21)

                                                              acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTg                                       <  2:1760472/100‑1 (MQ=255)

                                                              acaATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTg                                       >  1:455343/1‑100 (MQ=255)

                                                               caATGCCTGATGCGACGCTAGTGCGTCTTATCATGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGc                                      >  1:3535306/1‑100 (MQ=255)

                                                                 aTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCa                                    >  1:1158873/1‑100 (MQ=255)

                                                                 aTGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCa                                    <  2:638294/100‑1 (MQ=255)

                                                                  tGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAg                                   <  1:99470/100‑1 (MQ=255)

                                                                  tGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGCCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAg                                   >  2:3337428/1‑100 (MQ=255)

                                                                  ggcctgataagacgcactagcgtcgcatcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAg                                   >  1:123281‑M2/34‑100 (MQ=255)

                                                                   gcctgataagacgcactagcgtcgcatcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGa                                  >  1:161242‑M2/33‑100 (MQ=255)

                                                                   gcctgataagacgcactagcgtcgcatcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGa                                  >  2:2570296‑M2/33‑100 (MQ=255)

                                                                    CCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGAt                                 <  1:1674410‑M1/100‑1 (MQ=255)

                                                                     CTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGa                                  <  2:2922766‑M1/98‑1 (MQ=255)

                                                                     CTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                <  2:1178810‑M1/100‑1 (MQ=255)

                                                                     CTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATg                                >  2:2694519‑M1/1‑100 (MQ=255)

                                                                      TGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGc                               <  2:1324244‑M1/100‑1 (MQ=255)

                                                                      TGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGc                               >  2:3651502‑M1/1‑100 (MQ=255)

                                                                       GATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCg                              <  2:3774990‑M1/100‑1 (MQ=255)

                                                                        ATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGa                             <  1:736223‑M1/100‑1 (MQ=255)

                                                                         TGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGAc                            >  1:847566‑M1/1‑100 (MQ=255)

                                                                           cGACGCGAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGAc                            >  1:1442483/1‑98 (MQ=255)

                                                                              cacTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCa                       >  2:3967986/3‑100 (MQ=255)

                                                                               gCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCAt                      <  2:3084527/100‑1 (MQ=255)

                                                                               gCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCAt                      >  2:2462755/1‑100 (MQ=255)

                                                                                cTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCAtt                     >  2:4263237/1‑100 (MQ=255)

                                                                                 tAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTc                    <  2:182250/100‑1 (MQ=255)

                                                                                  aGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTcn                   <  1:3328741/100‑2 (MQ=255)

                                                                                    tGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAAc                 <  1:504679/100‑1 (MQ=255)

                                                                                    tGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAAc                 <  1:1698059/100‑1 (MQ=255)

                                                                                     gCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACt                >  1:3843377/1‑100 (MQ=255)

                                                                                     gCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACt                <  2:4004795/100‑1 (MQ=255)

                                                                                       gTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTAc              >  1:2944156/1‑100 (MQ=255)

                                                                                       gTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTAc              >  2:434059/1‑100 (MQ=255)

                                                                                       gTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGAGAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTAc              <  1:2562812/100‑1 (MQ=255)

                                                                                           tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc          <  2:560789/100‑1 (MQ=255)

                                                                                           tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc          >  1:2209196/1‑100 (MQ=255)

                                                                                           tATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc          >  2:3500726/1‑100 (MQ=255)

                                                                                           tATCAGGCCTACAAACCGGCACTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATc          >  1:94500/1‑100 (MQ=255)

                                                                                            atcaggcCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATcc         <  2:258800‑M2/93‑1 (MQ=255)

                                                                                                  cCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAgcgc   >  2:3683962‑M2/2‑100 (MQ=255)

                                                                                                  cCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCCCATTCAACTACAATccc        >  1:541229‑M2/2‑95 (MQ=255)

                                                                                                   cTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGcc  >  2:4094345/1‑100 (MQ=255)

CGATCATCGCGGAAAAGGCCGGGGTCATGGGCACCGCCATTAAACGCGTCCGCCAATGGAGCACAATGCCTGATGCGACGCTAGTGCGTCTTATCAGGCCTACAAACCGGCTCTTTAACGCGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCCAATAGTGCCAGATGCGACGCTCATTCAACTACAATCCCAGCGCC  >  NC_000913/2511285‑2511483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.