BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4332016 =	NA (NA)	8 (0.060)	5/160	NT	NA	noncoding (3/32 nt)	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	4332047 =	NA (NA)	8 (0.060)	5/160	NT	NA	intergenic (+43/‑69)	proP/pmrR	proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Only 100 of 192 total aligned reads displayed.

ATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACT  >  NC_000913/4331949‑4332145

cactctcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAAt                                                                                                     >  2:164467‑M1/68‑100 (MQ=255)

cactctcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAAt                                                                                                     >  1:1696075‑M1/68‑100 (MQ=255)

aTTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAAt                                                                                                     <  2:3861534/100‑1 (MQ=255)

 tttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAAtt                                                                                                    >  2:460648/1‑100 (MQ=255)

  ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                   >  1:3388922/1‑100 (MQ=255)

  ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                   <  1:301114/100‑1 (MQ=255)

  ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                   <  1:2952436/100‑1 (MQ=255)

  ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATGGATGAATAAGCAGAAACGGATGCCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                   <  1:1545459/100‑1 (MQ=255)

   tGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGa                                                                                                  >  2:3145959/1‑100 (MQ=255)

     tcctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                                >  2:2912274‑M1/63‑100 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                                <  2:1358870/100‑1 (MQ=255)

     cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                                >  2:1599365/1‑100 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                              >  1:1014161/1‑100 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                              <  1:3669965/100‑1 (MQ=255)

       ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                              >  1:1005691/1‑100 (MQ=255)

        gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                             >  2:2780104/1‑100 (MQ=255)

        gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                             <  1:1751853/100‑1 (MQ=255)

         cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                            >  2:1468758/1‑100 (MQ=255)

          gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                           >  2:1090750/1‑100 (MQ=255)

          gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                           >  2:3220373/1‑100 (MQ=255)

            aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAg                                                                                         <  2:1945522/100‑1 (MQ=255)

             aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                        <  1:4087189/100‑1 (MQ=255)

              cGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGt                                                                                       <  2:1194198/100‑1 (MQ=255)

               gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                      <  1:4142813/100‑1 (MQ=255)

                 aCCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                    >  2:2610002/1‑100 (MQ=255)

                 aCCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                    >  2:4043094/1‑100 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTATGGTTCAc                                                                                   <  1:2235853/100‑1 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                   >  2:1074380/1‑100 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                   <  2:4002023/100‑1 (MQ=255)

                  cccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGACCTGATGTGACGCTGTCTTATCAAGCCAATTGAACTCTCAAGGTTCAc                                                                                   >  1:1406879/1‑100 (MQ=255)

                   acGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAcn                                                                                  <  1:3908558/99‑2 (MQ=255)

                    cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACtt                                                                                 >  1:546784/1‑100 (MQ=255)

                      ccTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTaa                                                                               <  1:331944/100‑1 (MQ=255)

                       cTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAt                                                                              <  2:2256820/100‑1 (MQ=255)

                        tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTa                                                                                <  2:1907054/97‑1 (MQ=255)

                        tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtc                                                                             <  1:1733290/100‑1 (MQ=255)

                          gTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtctc                                                                           <  2:157857/100‑1 (MQ=255)

                           tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                          >  2:2312721/1‑100 (MQ=255)

                            gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                         <  1:2780093/100‑1 (MQ=255)

                            gcagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGACCAATTGAACTCTTAAGGTTCACTTAATCTCTg                                                                         >  2:2936064/1‑100 (MQ=255)

                                   cATCCGCGAATTGATGAATAAGCTGAAACTGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcgcg                                                                    <  1:1991728/98‑1 (MQ=255)

                                    aTCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCAt                                                                 <  1:4180733/100‑1 (MQ=255)

                                       cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAct                                                              >  2:4277524/1‑100 (MQ=255)

                                       cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAct                                                              >  2:2472707/1‑100 (MQ=255)

                                       cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAct                                                              >  1:1177511/1‑100 (MQ=255)

                                               gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                      >  1:3040256/1‑100 (MQ=255)

                                                 tgaATAAGCTGAAACTGATGGCCTTATGGGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                    <  2:3997614/100‑1 (MQ=255)

                                                 tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                    <  1:3889338/100‑1 (MQ=255)

                                                  gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAGGGTTCAGTTAATCTCTGACGCGCATACTCTCCTCCAGGt                                                   >  1:2997332/1‑100 (MQ=255)

                                                    aTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTa                                                 >  2:3617212/1‑100 (MQ=255)

                                                       aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                            <  1:2511122/100‑1 (MQ=255)

                                                       aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑g                                            >  2:3046237/1‑100 (MQ=255)

                                                        gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gg                                           <  2:1516999/100‑1 (MQ=255)

                                                        gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gg                                           <  2:854457/100‑1 (MQ=255)

                                                         cTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑gga                                          >  1:1596461/1‑100 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         <  2:3388934/100‑1 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         >  2:694836/1‑100 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         >  2:3663120/1‑100 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         <  2:3925973/100‑1 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         >  2:1950347/1‑100 (MQ=255)

                                                          tGAAACGGATGGCCTGATGTGACGCAGTCTTATCAGGCCAATTGAACTCCTAAGGGTCACCGAATCTCTGACGCGCATACGCTCCTCCAGGTTAAC‑‑ggag                                         >  2:694822/1‑100 (MQ=255)

                                                           gAAACGGATGGCCTGATGTGCCGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggag                                         >  1:2700960/1‑99 (MQ=255)

                                                           gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagg                                        >  1:584227/1‑100 (MQ=255)

                                                            aaaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑ggagga                                       <  1:3578428/100‑1 (MQ=255)

                                                             aaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑Ggaggag                                      <  1:4249948/100‑1 (MQ=255)

                                                               caattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGagag                                    >  1:2583983‑M2/36‑100 (MQ=255)

                                                               caattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGagag                                    >  1:2584073‑M2/36‑100 (MQ=255)

                                                               cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGagag                                    <  1:1278213/100‑1 (MQ=255)

                                                               cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGagag                                    >  2:2493283/1‑100 (MQ=255)

                                                                ggATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACGCTTAAGGTGCACTTAATCTCTGTCGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGgagatg                                   >  1:192178/1‑98 (MQ=255)

                                                                  aTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGc                                 <  1:452460/100‑1 (MQ=255)

                                                                   tGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatg                                <  2:1723542/100‑4 (MQ=37)

                                                                    ggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGCGTGCaa                               >  1:1743623‑M2/31‑100 (MQ=255)

                                                                    ggCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatgc                               <  2:3677641/100‑5 (MQ=37)

                                                                    GGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCaa                               <  2:363144‑M1/100‑1 (MQ=255)

                                                                      ccTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCC‑‑GTTAACCTGGAGGAGAGtatgcgc                             <  2:509335/100‑7 (MQ=25)

                                                                       CTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGa                            <  1:1801022‑M1/100‑1 (MQ=255)

                                                                         GATGTGACGCTGTCTTATCAGGCCAATTGAACTGTTAAGGTTCACTTAATCTCTGCCGCGCATACTCTCCACCAGGTTAAC‑‑GGAGGAGAGTGCAATGaa                           <  1:2566370‑M1/99‑1 (MQ=255)

                                                                         GATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaa                          <  1:3829735‑M1/100‑1 (MQ=255)

                                                                         GATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaa                          <  2:1699606‑M1/100‑1 (MQ=255)

                                                                         GATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTACAGGTTAAC‑‑GGAGGAGAGTGCAATGaa                           <  2:3846723‑M1/99‑1 (MQ=255)

                                                                           TGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGaaaaa                        <  2:4210340‑M1/100‑1 (MQ=255)

                                                                            gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAc                       >  1:2460317/1‑100 (MQ=255)

                                                                            gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAc                       <  2:2275790/100‑1 (MQ=255)

                                                                            gtgACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAc                       <  1:694832/100‑1 (MQ=255)

                                                                              gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAAcc                      >  1:3115590/1‑99 (MQ=255)

                                                                               aCGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTAACTTAATCGCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCgt                    <  2:2998690/100‑1 (MQ=255)

                                                                                  cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGtt                 >  1:2031014/1‑100 (MQ=255)

                                                                                    gTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTa               >  2:1444702/1‑100 (MQ=255)

                                                                                        tATCAGGCCAATTGAACTCTTAAGGTTCACTTAATTTCTGAGGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAATTCGTGTTTATGaa           <  1:2296210/100‑1 (MQ=255)

                                                                                        tATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGGCGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAACACCGTGTTTATg             >  1:76627/1‑98 (MQ=255)

                                                                                        tATCAGGCCAATTGAACTCTTAAGGTACACGTAATCTCTGACGCGCATACTCTCCTCCGGGTTAAC‑‑GGAGGAGAGTGCAATGAAAACCCGTGTTTa               <  1:1959440/96‑1 (MQ=255)

                                                                                         atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa          >  1:2108163‑M2/10‑100 (MQ=255)

                                                                                          tcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAg         <  1:920482‑M2/92‑1 (MQ=255)

                                                                                           caggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt        >  1:885089‑M2/8‑100 (MQ=255)

                                                                                            aGGCCAATTGAACTCTTAAGGTTCACATAATCTCTAACGCGAATACTCATCTCCAGGTTAAC‑‑GGAGGAAAAAAAAAAAAAAAACCGTGTTTATGAAAGtt       <  1:742449/100‑1 (MQ=255)

                                                                                              gccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTa     >  2:3345296‑M2/5‑100 (MQ=255)

                                                                                              gccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTa     <  2:3890351‑M2/96‑1 (MQ=255)

                                                                                               ccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTaa    >  1:1281880‑M2/4‑100 (MQ=255)

                                                                                                caATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAc   <  2:2652288‑M2/98‑1 (MQ=255)

ATTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAAC‑‑GGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACT  >  NC_000913/4331949‑4332145

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.