New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4587878NA (NA)13 (0.090) 5/162 NT NA noncoding (7/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4587891 NA (NA)noncoding (20/27 nt) REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences REP348 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 179 total aligned reads displayed.

ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990
                                                                                                   |                                                                                                   
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                     >  2:4031222/1‑100 (MQ=255)
aTCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCtt                                                                                                     <  1:3133827/100‑1 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  2:87695‑M2/1‑99 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  2:650315‑M2/1‑99 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    >  1:1588687‑M2/1‑99 (MQ=255)
 tCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTa                                                                                                    <  1:2033603‑M2/100‑2 (MQ=255)
  cttcaaCGAAGTAGCGGTCTCGTCACGATTGTTTATCATGCCCATACTGGAAATGGACTCCTTTAATAGAAATATCAGGCCGGATGCGGCTTCGCCtt                                                                                                     >  1:560354/5‑98 (MQ=255)
  cGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTat                                                                                                   <  2:2823232‑M2/100‑3 (MQ=255)
   gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:1641678‑M2/100‑4 (MQ=255)
   gAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:162153‑M2/100‑4 (MQ=255)
   gAAAACGAAGTAGGGGTTACTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:1881556‑M2/100‑4 (MQ=255)
    aaaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatcc                                                                                                 <  2:527435‑M2/100‑5 (MQ=255)
    aaaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatc                                                                                                  <  2:1132340‑M2/99‑4 (MQ=255)
     aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                                <  2:1346347‑M2/100‑6 (MQ=255)
     aaaCGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccg                                                                                                <  1:3513514‑M2/100‑6 (MQ=255)
        cGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTatccggcc                                                                                             >  1:1132337‑M2/1‑92 (MQ=255)
          aaGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCa                                                                                           <  2:3963921/100‑1 (MQ=255)
                 ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                    <  1:914540/100‑1 (MQ=255)
                 ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                    >  2:1898365/1‑100 (MQ=255)
                 ggTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAAcccc                                                                                    >  2:3427115/1‑100 (MQ=255)
                   tttCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCtt                                                                                  <  2:3437452/100‑1 (MQ=255)
                    ttcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTa                                                                                 <  2:1306512/100‑1 (MQ=255)
                    ttcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGCATGCGGCTGCGCCTTATCCGCCCCATAAcccc                                                                                    >  2:3446665/1‑97 (MQ=255)
                     tcttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTAc                                                                                <  1:2350010/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                              <  1:926275/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                              <  1:3738470/100‑1 (MQ=255)
                       ttcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACtt                                                                              >  2:2455843/1‑100 (MQ=255)
                        tcACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTc                                                                             >  1:245001/1‑100 (MQ=255)
                         cACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCAGGCCCATAACCCCTTACTTcc                                                                            >  1:857307/1‑100 (MQ=255)
                          aCGTTTGTTGAAGGTGCCGAAACTGGATATGGGCTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTcc                                                                            <  1:2230347/99‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                          <  2:815949/100‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                          <  2:1933240/100‑1 (MQ=255)
                           cGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTc                                                                          >  1:1974002/1‑100 (MQ=255)
                              ttgttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAc                                                                       <  1:3181475/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAAGTGGATATGGACTATTTGGAGTGAAATATCAGGCCGAATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCa                                                                         <  1:4169838/96‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     >  1:1274375/1‑100 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     <  1:673334/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAAccc                                                                     <  2:3718767/100‑1 (MQ=255)
                                gttgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCACATAACCCCTTACTTCCTCAAccc                                                                     >  1:1303823/1‑100 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                   >  2:2003775/1‑100 (MQ=255)
                                  tgAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCg                                                                   >  1:2095712/1‑100 (MQ=255)
                                   gAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGACTGCGCATTATCCGGCCAATAACCCCTTACTTCCTCAAcca                                                                     >  1:4059432/1‑96 (MQ=255)
                                       gTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAAc                                                              <  1:280423/100‑1 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                             >  2:4263722/1‑100 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                             >  2:2157028/1‑100 (MQ=255)
                                        tGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACg                                                             <  2:3260495/100‑1 (MQ=255)
                                         gCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGc                                                            <  1:3099943/100‑1 (MQ=255)
                                          ccGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCa                                                           >  2:1380661/1‑100 (MQ=255)
                                           cGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAg                                                          >  1:873338/1‑100 (MQ=255)
                                              aaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGccc                                                       <  1:3878855/100‑1 (MQ=255)
                                              aaCTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGccc                                                       <  2:303534/100‑1 (MQ=255)
                                                  ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                                   <  1:793338/100‑1 (MQ=255)
                                                  ggATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAt                                                   >  1:2591343/1‑100 (MQ=255)
                                                   gATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtc                                                  >  1:571852/1‑100 (MQ=255)
                                                     tatGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAAtctc                                                >  1:3701557/1‑100 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATTCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCtt                                              <  1:1929158/100‑1 (MQ=255)
                                                       tGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTGCCTCAACCGCGCAAACGCAGCCCGAATCTCtt                                              >  1:245440/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                             >  2:3663148/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                             >  2:1685575/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                             >  1:2897320/1‑100 (MQ=255)
                                                        ggACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTtc                                             >  1:2467546/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        >  1:482094/1‑100 (MQ=255)
                                                             aTTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCg                                        >  1:3962707/1‑100 (MQ=255)
                                                               tttGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGc                                      <  1:2001608/100‑1 (MQ=255)
                                                                   aGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCt                                  <  2:1590276/100‑1 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 <  2:3486850/100‑1 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 >  1:900646/1‑100 (MQ=255)
                                                                    gTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTg                                 >  2:2215954/1‑100 (MQ=255)
                                                                      gAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGa                               <  1:1215941/100‑1 (MQ=255)
                                                                       aaaTATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAt                              >  1:3313309/1‑100 (MQ=255)
                                                                         atatCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATcc                            <  2:1974006/100‑1 (MQ=255)
                                                                           atgaGGCCTGAGGCGGCTGCGCCGGATCCGGCCCATAACCCCTTACTTCCGCAACCCCGCGAACGCAGCCCGAATCGCTTCCTCCGGCAGCTGGATcc                            <  1:3265534/95‑1 (MQ=255)
                                                                           atCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCg                          <  1:3630583/100‑1 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTatgcggcctgatatttcactcaaaatagtccatatccagtttcggcaacttcaacaaacgtgaagaaaaccctac                          <  1:2226895‑M2/99‑76 (MQ=255)
                                                                            tCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGa                         <  1:2285949/100‑1 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaccccctactt                        <  1:184386‑M2/100‑78 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctactt                        <  2:4198047‑M2/100‑78 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctactt                        <  2:2844622‑M2/100‑78 (MQ=255)
                                                                             cAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                        >  2:2551125/1‑100 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaaccaacgtgaagaaacccctacttc                       <  2:1068128‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                       <  1:1325151‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttc                       <  2:2753618‑M2/100‑79 (MQ=255)
                                                                              aGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTCCTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGAt                        >  1:3992333/1‑99 (MQ=255)
                                                                               ggCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcg                      <  2:1186295‑M2/100‑80 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatcgtccatatccagtttcggcaccttcaacaaacgtgaagcaacccccacttcgt                     <  1:768794‑M2/100‑81 (MQ=255)
                                                                                gCCGGATGCGGCTGCGCCTTatccggcctgatatttcactcaaaatagtccatatccagtttcggcaccttcaacaaacgtgaagaaacccctacttcgt                     <  2:16620‑M2/100‑81 (MQ=255)
                                                                                 ccGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                    <  2:592108/100‑1 (MQ=255)
                                                                                 ccGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAac                    >  2:2156022/1‑100 (MQ=255)
                                                                                  cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                   <  2:674211/100‑1 (MQ=255)
                                                                                  cGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAaca                   >  2:1502306/1‑100 (MQ=255)
                                                                                   ggATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAacac                  <  2:1062823/100‑1 (MQ=255)
                                                                                      tGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAt               >  2:3355495/1‑100 (MQ=255)
                                                                                           cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGc          <  2:2033607/100‑1 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       >  1:1093701/1‑100 (MQ=255)
                                                                                              cgcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       >  2:3147659/1‑100 (MQ=255)
                                                                                               gcCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTAt       >  1:3807456/1‑99 (MQ=255)
                                                                                                ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATg      >  1:3366875/1‑99 (MQ=255)
                                                                                                ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGc     >  1:1615244/1‑100 (MQ=255)
                                                                                                   tATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGt  >  1:3599743/1‑100 (MQ=255)
                                                                                                   tATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGt  >  2:3087695/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATCGAAAACGAAGTAGGGGTTTCTTCACGTTTGTTGAAGGTGCCGAAACTGGATATGGACTATTTTGAGTGAAATATCAGGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGT  >  NC_000913/4587792‑4587990

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.