New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 374930 =NA (NA)13 (0.090) 6/164 NT NA noncoding (1/436 nt) REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences
?NC_000913 2133462 = NA (NA)noncoding (31/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 213 total aligned reads displayed.

GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGAT  >  NC_000913/2133363‑2133561
                                                                                                   |                                                                                                   
  cATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                   >  1:1460152/1‑100 (MQ=255)
    tataGATTGAGATCAGCGGATTGGGTTTCATAGGTTGTTCTCCCGGCGTATGAGTTGGTTTGTTTTCCGGATGCGGCGTGAACGCTTTATTTGGCCt                                                                                                    >  1:847025/1‑97 (MQ=37)
     ataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTCCg                                                                                                 >  1:4188336/1‑99 (MQ=255)
      taGATTGATATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                  <  1:3807780/97‑1 (MQ=255)
            gagaTCAGCGGTTTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTACCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTg                                                                                         <  2:1540451/100‑1 (MQ=255)
             agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGc                                                                                        <  1:4216753/100‑1 (MQ=255)
              gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCg                                                                                       <  2:3762194/100‑1 (MQ=255)
                tCAGCGGATTGTTTTTCATAGGTTGCTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGaa                                                                                     <  1:4198/100‑1 (MQ=255)
                  aGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATg                                                                                   >  2:1436424/1‑100 (MQ=255)
                  aGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATg                                                                                   >  1:3359926/1‑100 (MQ=255)
                   gCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGc                                                                                  >  2:1961412/1‑100 (MQ=255)
                   gCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGc                                                                                  <  2:3010333/100‑1 (MQ=255)
                     ggATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAg                                                                                >  1:4236246/1‑100 (MQ=255)
                     ggATTGATTTTCATAGGTTGTTCTCCGGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAg                                                                                >  2:1141207/1‑100 (MQ=255)
                      gATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAgg                                                                               <  2:708647/100‑1 (MQ=255)
                       aTTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGc                                                                              <  1:1198517/100‑1 (MQ=255)
                        ttGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcg                                                                             <  1:4063811/100‑1 (MQ=255)
                        tggtggttCATAGGTTGTTCGCCCGGCTTATGTGCTGGTTTGCTGGCCGGAGGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGc                                                                                  <  1:3882660/89‑1 (MQ=37)
                          gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtc                                                                           <  2:3901876/100‑1 (MQ=255)
                             ttttATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGtt                                                                        <  2:209037/100‑1 (MQ=255)
                                cATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAtt                                                                     >  2:1329987/1‑100 (MQ=255)
                                cATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAtt                                                                     >  2:2526654/1‑100 (MQ=255)
                                 aTAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAttt                                                                    >  1:3234702/1‑100 (MQ=255)
                                   aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGGCGGATGCTGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCTAATGCATGCGTCGTTATTTCg                                                                  <  1:1244553/100‑1 (MQ=38)
                                   aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTc                                                                   <  1:3520362/99‑1 (MQ=255)
                                   aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                                                  <  1:1536456/100‑1 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  2:464226/1‑100 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                 >  2:3387602/1‑100 (MQ=255)
                                     tccgatctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                                                <  2:308275/95‑1 (MQ=255)
                                      ttgttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCAt                                                               >  2:1871079/1‑100 (MQ=255)
                                      ccgatctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                                                <  2:307995/95‑1 (MQ=255)
                                        gttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGGGCGAATGCAGGCGTCGTTATTTCGCATcc                                                             >  1:3653586/1‑100 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCgcc                                                          >  2:356953/1‑98 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          <  1:3659898/100‑1 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          >  1:2501113/1‑100 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                          >  2:2024466/1‑100 (MQ=255)
                                           ctcCCGGCTTATGAGCAGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATGTAGCATc                                                              >  1:3398186/1‑96 (MQ=255)
                                             cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCGCGCCTACGGGGCGGTGCGAACGCAGGCGGCGGTCTTTCGCCTCCGACt                                                         >  1:4002141/1‑99 (MQ=37)
                                             cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCaagatcgga                                                        >  1:308273/1‑92 (MQ=255)
                                             cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCaagatcgga                                                        >  1:307993/1‑92 (MQ=255)
                                             cccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTAGCATCCGACtt                                                        >  2:2486148/1‑100 (MQ=255)
                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                       >  2:1186129/1‑100 (MQ=255)
                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                       <  2:203852/100‑1 (MQ=255)
                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                       <  1:319272/100‑1 (MQ=255)
                                               cagCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtat                                                      >  2:2899962/3‑100 (MQ=255)
                                               cGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtat                                                      <  1:2719480/100‑1 (MQ=255)
                                                  cTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtatt                                                   <  1:3011332/100‑1 (MQ=255)
                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                                                 <  1:619051/100‑1 (MQ=255)
                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattc                                                  >  2:4257366/1‑99 (MQ=255)
                                                     aTGAGCTGGTTTGCTTGCCGGATGCGTCTTGAACGCCTTATCCTGACGACGTGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgt                                                <  1:2692619/100‑1 (MQ=255)
                                                     aTGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgt                                                <  1:2130344/100‑1 (MQ=255)
                                                      tGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgta                                               >  1:647477/1‑100 (MQ=255)
                                                       gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                                              >  1:900612/1‑100 (MQ=255)
                                                        aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt                                             <  2:3965519/100‑1 (MQ=255)
                                                           tGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATattcgtattcgt                                          <  1:3276273/100‑1 (MQ=255)
                                                            ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGGGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                         >  1:467530/1‑100 (MQ=255)
                                                            ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                         <  2:815315/100‑1 (MQ=255)
                                                            ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                         >  2:2374360/1‑100 (MQ=255)
                                                            ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                         <  1:181884/100‑1 (MQ=255)
                                                            ggTTTGCTTGCCGGATACGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATActcatattcgta                                         >  1:3558917/1‑100 (MQ=255)
                                                              cccgtaggccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAAt                                       >  1:859530‑M2/38‑100 (MQ=255)
                                                                tacttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAg                                     <  1:9730/98‑1 (MQ=255)
                                                                 gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                    <  2:4236268/100‑1 (MQ=255)
                                                                 gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                    <  1:1629857/100‑1 (MQ=255)
                                                                 gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGAAGGCGTCGTTATTTCGCATCCGACTTATATTCTTATTCGTAATAGc                                    >  1:1703210/1‑100 (MQ=255)
                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                   <  2:2720957/100‑1 (MQ=255)
                                                                   ttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCa                                  <  2:180654/100‑1 (MQ=255)
                                                                    tgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAt                                 >  1:1135899/1‑100 (MQ=255)
                                                                    tgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCAt                                 >  1:174812/1‑100 (MQ=255)
                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                <  2:2165972/100‑1 (MQ=255)
                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                >  1:2789712/1‑100 (MQ=255)
                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                <  2:602943/100‑1 (MQ=255)
                                                                     gcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                                <  1:1329983/100‑1 (MQ=255)
                                                                      ccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTGGTAATAGCCATaa                               >  1:557373‑M2/30‑100 (MQ=255)
                                                                      ccGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATaa                               >  2:1086635/1‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATCTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                             >  1:2921466‑M2/28‑100 (MQ=255)
                                                                          aTGCGGTGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCt                           <  2:845580/100‑1 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGa                         <  2:1905080/100‑1 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGAt                        >  2:2317832/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGAt                        >  1:2713224/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       <  2:757041/100‑1 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       >  2:866348/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       >  1:733046/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       >  2:3128887/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                       >  2:3421754/1‑100 (MQ=255)
                                                                                  tGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcgcg                   <  2:3451688/100‑1 (MQ=255)
                                                                                  tGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcgcg                   <  2:1476670/100‑1 (MQ=255)
                                                                                    aaCGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCt                 <  2:3334127/100‑1 (MQ=255)
                                                                                    aaCGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCt                 >  2:2849108/1‑100 (MQ=255)
                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg          >  2:1518581/1‑100 (MQ=255)
                                                                                            atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGcgcggn         <  2:1029755‑M2/93‑2 (MQ=255)
                                                                                            atccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggc         >  1:1053360‑M2/8‑100 (MQ=255)
                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        >  1:2183086‑M2/7‑100 (MQ=255)
                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        <  2:733260‑M2/94‑1 (MQ=255)
                                                                                              ccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGcggcgg       >  2:1659997‑M2/6‑100 (MQ=255)
                                                                                               cggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTCTATTCGTATTCGTCATAGCCATAATCCTGATACGCGCTGGCGccgcgg       >  1:2069940‑M2/5‑99 (MQ=255)
                                                                                                ggcCTACGGGGCGGTGCTAATGAAGGCATCGATATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg        <  1:788376‑M2/94‑1 (MQ=255)
                                                                                                 gcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCCTCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAg    <  2:933052‑M2/98‑1 (MQ=255)
                                                                                                 gcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAg    >  1:2312889‑M2/3‑100 (MQ=255)
                                                                                                  cCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATAcgcgccagcgcgtatcagga   <  1:331216‑M2/99‑9 (MQ=255)
                                                                                                   |                                                                                                   
GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGAT  >  NC_000913/2133363‑2133561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.