New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1468681NA (NA)78 (1.010)
+ACACCATGTTATCGGAGAGCTGCCAACGTATGGTTATCGTCGGG
11/90 NT NA noncoding (560/1331 nt) IS2 repeat region
?NC_000913 1650843 = NA (NA)noncoding (1/706 nt) IS2 repeat region

Only 100 of 732 total aligned reads displayed.

AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG  >  NC_000913/1650745‑1650941
                                                                                                  |                                                                                                  
aGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTa                                                                                                   <  1:782764/100‑1 (MQ=255)
    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                               <  1:3234469/100‑1 (MQ=255)
    cacTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATggg                                                                                               <  1:3082212/100‑1 (MQ=255)
      cTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgcg                                                                                             >  1:4067618/1‑100 (MQ=255)
      cTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGgcg                                                                                             >  1:2205997/1‑100 (MQ=255)
        gAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgct                                                                                           <  2:611456/100‑1 (MQ=255)
           aaTTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCgctgct                                                                                        >  2:1994647/1‑100 (MQ=255)
              tCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCTAATACAAGCATACATGGAAAACACTGGTTGACGAACTGGCCTATGGGCGCTGCTTCg                                                                                     <  1:3518327/100‑1 (MQ=255)
              tCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCg                                                                                     <  2:2294926/100‑1 (MQ=255)
                    ggAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACa                                                                               >  1:56412/1‑100 (MQ=255)
                    ggAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACa                                                                               >  2:3795721/1‑100 (MQ=255)
                            gtgtatacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAAc                                                                       >  1:1486154‑M2/71‑100 (MQ=255)
                              gtataaggagaagcccatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTGTGGGCGCTGCTTCGCAGGCAGGCAGAAc                                                                       >  1:1568009‑M2/69‑98 (MQ=255)
                                atacggagaagcacatccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGa                                                                   >  1:2058406‑M2/67‑100 (MQ=255)
                                   gTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATgg                                                                <  1:1124800/100‑1 (MQ=255)
                                     cATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTa                                                              <  1:1007353/100‑1 (MQ=255)
                                          ctgcCATTCATCGCGAATACAAGCAGACATGGAAAACCCTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCt                                                         >  1:650792/1‑100 (MQ=255)
                                               tccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGAt                                                    >  2:1349916‑M2/52‑100 (MQ=255)
                                               tccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggGATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGa                                                     >  2:4276225‑M2/52‑99 (MQ=255)
                                                ttCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   <  1:4227469/100‑1 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATTGGCGCTGCTTCGCAGACAGGCAGAACTTGATGATATGCCTGCGATc                                                   >  1:1428343‑M2/51‑100 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   <  1:2686804‑M2/50‑1 (MQ=255)
                                                ccgtatacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATc                                                   <  2:1806029‑M2/50‑1 (MQ=255)
                                                 tCATCGCGAATACAAGCAGAAATGGAACACACTGGATGACGAACTCGCCTAAGGGCGTTGCTTCGCCGACAGGCATAACATCACGTTATGCCTgtctgc                                                   <  1:2650406/99‑6 (MQ=255)
                                                  cATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCaa                                                 >  1:3339686/1‑100 (MQ=255)
                                                    tCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                               <  2:2517680/100‑1 (MQ=255)
                                                    atacaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATg                                               <  1:1250795‑M2/54‑1 (MQ=255)
                                                      gcgAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             <  2:3351655/100‑1 (MQ=255)
                                                      acaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             >  2:343680‑M2/45‑100 (MQ=255)
                                                      acaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             <  2:1520364‑M2/56‑1 (MQ=255)
                                                      acaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             >  1:3477879‑M2/45‑100 (MQ=255)
                                                      acaccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGcc                                             >  1:2858364‑M2/45‑100 (MQ=255)
                                                       caccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCa                                            >  2:817436‑M2/44‑100 (MQ=255)
                                                         ccatgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGCTCAATGCCaaa                                          >  2:2630352‑M2/42‑100 (MQ=255)
                                                           tACAAGCAGAAATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGACCAATGCCAAACg                                        >  1:3587685/1‑100 (MQ=255)
                                                            tgttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgt                                       <  2:2696708‑M2/62‑1 (MQ=255)
                                                             gttatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACgtg                                      <  1:2430968‑M2/63‑1 (MQ=255)
                                                               tatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                    <  1:1314668‑M2/65‑1 (MQ=255)
                                                               tatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                    >  2:493404‑M2/36‑100 (MQ=255)
                                                               tatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                    >  2:3122227‑M2/36‑100 (MQ=255)
                                                               tatcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGtt                                    >  2:4019583‑M2/36‑100 (MQ=255)
                                                                atcggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGttt                                   <  2:650888‑M2/66‑1 (MQ=255)
                                                                  cggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAc                                 >  2:1696356‑M2/33‑100 (MQ=255)
                                                                  cggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAc                                 >  2:1241523‑M2/33‑100 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                                <  2:2210074‑M2/69‑1 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                                >  2:2171629‑M2/32‑100 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                                <  2:2081021‑M2/69‑1 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                                <  2:114524‑M2/69‑1 (MQ=255)
                                                                   ggagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTAcc                                >  2:4131884‑M2/32‑100 (MQ=255)
                                                                    gagagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCg                               <  2:3727630‑M2/70‑1 (MQ=255)
                                                                     agagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                              <  1:4144831‑M2/71‑1 (MQ=255)
                                                                     agagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCgg                              <  2:2371155‑M2/71‑1 (MQ=255)
                                                                      gagctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGa                             >  2:3932994‑M2/29‑100 (MQ=255)
                                                                       agctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAt                            <  2:1044204‑M2/73‑1 (MQ=255)
                                                                        gctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGAt                            <  1:1361898‑M2/73‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  2:1377730‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:1796883‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:1667439‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  2:4080966‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:3420030‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          >  2:703441‑M2/26‑100 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCa                          <  1:2907669‑M2/75‑1 (MQ=255)
                                                                         ctgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCATGCGATCAATGCCAAACGTGTTTACCGGATCa                          >  1:4023106‑M2/26‑100 (MQ=255)
                                                                          tgccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCAt                         >  2:550422‑M2/25‑100 (MQ=255)
                                                                          naaaCACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCAt                         >  2:911212/2‑100 (MQ=255)
                                                                           gccaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATg                        >  2:760700‑M2/24‑100 (MQ=255)
                                                                            ctaacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgc                       <  1:2537856‑M2/78‑1 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTCTGCCTGCGATCACTGCCAAACGTGTTTACCGGATCATg                        >  1:3012191‑M2/22‑98 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcg                      >  2:3057023‑M2/22‑100 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcg                      <  2:4183073‑M2/79‑1 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcg                      >  1:904045‑M2/22‑100 (MQ=255)
                                                                             caacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcg                      <  1:1196079‑M2/79‑1 (MQ=255)
                                                                              aacgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATgcgc                     <  2:2441489‑M2/80‑1 (MQ=255)
                                                                               acgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGcc                    <  1:3851936‑M2/81‑1 (MQ=255)
                                                                               acgtatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGcc                    <  1:3145678‑M2/81‑1 (MQ=255)
                                                                                  tatggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGGGTTTACCGGAGCATGCGCgaga                 >  1:3750658‑M2/17‑100 (MQ=255)
                                                                                  ggATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGa                 >  1:2129706/1‑100 (MQ=255)
                                                                                   gATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGaa                <  1:3674504/100‑1 (MQ=255)
                                                                                    tggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAAt               >  1:2794057‑M2/15‑100 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATg              <  2:1425323‑M2/87‑1 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATg              >  2:3242783‑M2/14‑100 (MQ=255)
                                                                                     ggttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATg              >  1:2357668‑M2/14‑100 (MQ=255)
                                                                                      gttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgc             <  2:1886187‑M2/88‑1 (MQ=255)
                                                                                       ttatcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgcg            >  1:983798‑M2/12‑100 (MQ=255)
                                                                                        cGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATgcgc           <  1:1901751/100‑1 (MQ=40)
                                                                                         gAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt          >  1:496216/1‑100 (MQ=40)
                                                                                         gAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt          >  2:2877850/1‑100 (MQ=40)
                                                                                         atcgtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCt          <  2:3499449‑M2/91‑1 (MQ=255)
                                                                                            gtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGtt       >  2:3864591‑M2/7‑100 (MQ=255)
                                                                                            gtcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGtt       >  2:274185‑M2/7‑100 (MQ=255)
                                                                                             tcgggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTg      <  2:2561390‑M2/95‑1 (MQ=255)
                                                                                              ggCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGc     >  2:2927767/1‑100 (MQ=33)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    >  2:1596415‑M2/4‑100 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    >  1:3906335‑M2/4‑100 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    <  1:2003916‑M2/97‑1 (MQ=255)
                                                                                               gggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCt    <  2:857089‑M2/97‑1 (MQ=255)
                                                                                                ggTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCtt   <  2:3539287‑M2/98‑1 (MQ=255)
                                                                                                 gTATGGGTGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGAGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTg  <  1:2290109‑M2/99‑1 (MQ=255)
                                                                                                 gTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTg  <  2:280988‑M2/99‑1 (MQ=255)
                                                                                                 gTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTg  <  2:3632574‑M2/99‑1 (MQ=255)
                                                                                                  |                                                                                                  
AGTACACTGAAAATTCAACAGGAAAAATCAGCCCGGTCATTGCTGCCATTCATCGCGAATACAAGCAGACATGGAAAACACTGGATGACGAACTGGCCTATGGGCGCTGCTTCGCAGACAGGCAGAACTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTG  >  NC_000913/1650745‑1650941

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.