BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	36,231	T→C	100%	intergenic (‑69/+40)	caiD ← / ← caiC	carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	36,231	0	T	C	100.0%	490.3 / ‑6.7	143	intergenic (‑69/+40)	caiD/caiC	carnitinyl‑CoA dehydratase/putative crotonobetaine/carnitine‑CoA ligase
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (64/78); minor base G (0/1); total (64/79)

Only 100 of 144 total aligned reads displayed.

TGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCT  >  NC_000913/36135‑36327

tGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGcgtg                                                                                               >  2:1358996/1‑100 (MQ=255)

   gggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGATCGTGat                                                                                             >  2:3545223/1‑99 (MQ=255)

   gggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatt                                                                                            >  2:1083055/1‑100 (MQ=255)

    ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta                                                                                           >  2:3645541/1‑100 (MQ=255)

    ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta                                                                                           <  2:1084890/100‑1 (MQ=255)

    ggTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta                                                                                           >  1:2073795/1‑100 (MQ=255)

    ggTAAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGatta                                                                                           <  1:2318592/100‑1 (MQ=255)

     gtaagacatAATGAATCACAAATTCCTTTTCTACATATTTGATTTTTAATGTACGGAAACATACCAGAAAAAAATGCATATTGTTTTAGAGCGTGa                                                                                              <  1:2810162/88‑1 (MQ=255)

      tCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACGACAACATCCCTGCAAAAAATTCATATTGTTTTAGAGCGTGattatt                                                                                         >  1:1996020/1‑100 (MQ=255)

       cAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGAttatta                                                                                        <  1:4075796/100‑1 (MQ=255)

        aGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAg                                                                                       <  1:2257643/100‑1 (MQ=255)

         gATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGc                                                                                      >  2:3642408/1‑100 (MQ=255)

           tatAATGATTCACTCATTCCATTTCTCCATTTTTGTTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                    <  1:3311191/98‑1 (MQ=255)

           tGTAATGATTCACTCAATCCTTTTCTCCATTTTTGCTTTTTCAGGGAGGACAACATACATGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTg                                                                                    <  1:305764/100‑1 (MQ=255)

            gTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTgg                                                                                   <  2:3110231/100‑1 (MQ=255)

             tAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGc                                                                                  >  2:4118201/1‑100 (MQ=255)

               atcaTTCACTCATTCCTTTTCTCCACTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGc                                                                                  <  1:3760202/95‑1 (MQ=255)

               aTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAATATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAg                                                                                <  1:2280285/100‑1 (MQ=255)

               aTGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAg                                                                                >  2:1340762/1‑100 (MQ=255)

                tGATTCACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACGACAACATCCCTGCAAAAAATTCATTTTGTTTTAGAGCGTGATTATTAGCt                                                                                     >  1:1445087/1‑94 (MQ=255)

                 gATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAggg                                                                              <  2:2546667/100‑1 (MQ=255)

                  aTTCACTCATTCCTTTTCTCCATTTTTTCTTTTTCAGGTACGACAACATCCCTGCTAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt                                                                             >  1:3041725/1‑100 (MQ=255)

                  aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAggga                                                                             >  2:1557011/1‑99 (MQ=255)

                  aTTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt                                                                             >  2:2079622/1‑100 (MQ=255)

                   ttCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTa                                                                            >  2:807799/1‑100 (MQ=255)

                   ttCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTa                                                                            <  2:561296/100‑1 (MQ=255)

                   ttCACTCAGTCCTTTTCTCCATTTTTGTTTTTTCAGGGACGACAACAAAAAAAAAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGt                                                                             <  1:2307342/99‑1 (MQ=255)

                    tCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAg                                                                           <  1:898280/100‑1 (MQ=255)

                     cACTCATTCCTTTTCTCCATTTTTTTTTTTTTTTTTACCACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCTGCGTact                                                                          >  1:1618300/1‑98 (MQ=255)

                     cACTCATTCCTTTTCTCCATTTTTTTTTTTTTTGGGACAACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTTGCTGGCTGGGTAg                                                                           >  1:2689395/1‑99 (MQ=255)

                         cATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTccc                                                                      <  1:3815674/100‑1 (MQ=255)

                           ttCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctg                                                                    <  1:3424056/100‑1 (MQ=255)

                             ccTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgct                                                                  >  2:719736/1‑100 (MQ=255)

                              cTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgctg                                                                 >  2:2448957/1‑100 (MQ=255)

                              cTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCctgctg                                                                 <  2:347082/100‑1 (MQ=255)

                                tttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGtt                                                               <  2:2301877/100‑1 (MQ=255)

                                tttCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGAACTACCctgccagc                                                               <  2:1878298/100‑5 (MQ=255)

                                tttCTCCATTGTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGAACTACCctgccagc                                                               <  2:4042089/100‑5 (MQ=255)

                                   ctcCATTCTTGCTTTTGCAGGGACGACAACCGCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGAACTACCctgccagctaa                                                            <  1:3991891/100‑8 (MQ=255)

                                     ccATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatt                                                          >  2:3625868/1‑100 (MQ=255)

                                      cATTTTTTCTTTTTTATTTACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTTCTGTTTCattt                                                         >  1:2302788/1‑100 (MQ=255)

                                        tttttGCTGTTTAAGGGACGACAACATCCCTGCAAACAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGTGAACTACCctgccagc                                                               <  1:2923401/92‑5 (MQ=255)

                                         ttttGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttatt                                                      <  1:3103240/100‑1 (MQ=255)

                                          tttGCTTTTTCAGGGACGAAAACAACCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCatttatt                                                      <  2:442903/99‑1 (MQ=255)

                                            tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa                                                   >  1:2892935/1‑100 (MQ=255)

                                            tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa                                                   <  1:1958673/100‑1 (MQ=255)

                                            tGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCa                                                   <  2:865200/100‑1 (MQ=255)

                                              cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa                                                 <  1:272297/100‑1 (MQ=255)

                                              cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa                                                 >  2:730838/1‑100 (MQ=255)

                                              cTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGa                                                 <  1:1707131/100‑1 (MQ=255)

                                               tttttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAt                                                <  2:2960145/100‑1 (MQ=255)

                                                 tttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttc                                              <  1:1645728/100‑1 (MQ=255)

                                                 tttCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttc                                              <  2:3396457/100‑1 (MQ=255)

                                                     aGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGAttctttc                                          >  1:1947806/1‑100 (MQ=255)

                                                        gacgacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATAATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTaa                                       >  1:2369765/1‑100 (MQ=255)

                                                          cgacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAatt                                     >  1:3724327/1‑100 (MQ=255)

                                                           gacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAatta                                    <  2:1189681/100‑1 (MQ=255)

                                                           gacAACATCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAatta                                    >  2:1921751/1‑100 (MQ=255)

                                                               acctggcTGCAAAACAGGCATATTGTTTTAGAGGGTTTTTATTGGGTGGCAGGGTAGTTCTCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTAttt                                 <  1:2795278/93‑1 (MQ=255)

                                                               acaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTAtttt                                <  2:1172881/100‑1 (MQ=255)

                                                               acaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTAtttt                                >  1:2104743/1‑100 (MQ=255)

                                                               acaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTAtttt                                <  1:3101593/100‑1 (MQ=255)

                                                               acaTCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTACAGATTCTTTCTAATTAttt                                 <  1:3144108/99‑1 (MQ=255)

                                                                  tCCCTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTccc                             >  2:1990543/1‑100 (MQ=255)

                                                                   cccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCGGTTTCATTTTTTTGAGACTTTGTCTAATTAtttttc                              >  1:706128/1‑96 (MQ=255)

                                                                    ccTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCg                           >  1:2190575/1‑100 (MQ=255)

                                                                     cTGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGa                          <  1:44262/100‑1 (MQ=255)

                                                                      tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAg                         <  2:4181609/100‑1 (MQ=255)

                                                                      tGCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGATGCTTCATTGATTTCAGATTCTTTCTAATTATTTTCCCCGAg                         >  1:3000918/1‑100 (MQ=255)

                                                                       gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGGTGGCAGGGTAGTATACTGTTTTTTCAGTTATTTCAGATACTTTATAAGTATTTTACCCGAg                         <  1:3479257/99‑1 (MQ=255)

                                                                       gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc                        <  1:359000/100‑1 (MQ=255)

                                                                       gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc                        <  2:2302794/100‑1 (MQ=255)

                                                                       gCAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGc                        >  1:4135247/1‑100 (MQ=255)

                                                                        cAAAAAATGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCa                       >  2:3195995/1‑100 (MQ=255)

                                                                         aaaaaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTccc                             <  1:2476372/93‑1 (MQ=255)

                                                                            aaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTa                   <  2:1654621/100‑1 (MQ=255)

                                                                            aaaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTa                   <  1:1083052/100‑1 (MQ=255)

                                                                             aaTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTAc                  >  2:1306679/1‑100 (MQ=255)

                                                                              aTGGATATTTTTTTAGAGCGGGCTTATTAGCTGGCAGGTTAGTTCGCTGCTGTTTCATTTACTCCGGATGCTGTCTAAGCATTTTCCCCGACCAATTACg                 >  1:195536/1‑100 (MQ=255)

                                                                              aTGCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACg                 <  1:3645525/100‑1 (MQ=255)

                                                                                gCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTg               <  2:2680449/100‑1 (MQ=255)

                                                                                gCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATGTTCCCCGAGCAATTACGTg               <  1:697765/100‑1 (MQ=255)

                                                                                gCATATTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTGTCATTTATTTCAGATTCTTTCTAATTATTTTCTCCGAGCAATTActt                >  1:1139221/1‑97 (MQ=255)

                                                                                  atatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGc             <  2:3302005/100‑1 (MQ=255)

                                                                                   tatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCa            <  2:3839914/100‑1 (MQ=255)

                                                                                   tatTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCa            >  1:991862/1‑100 (MQ=255)

                                                                                    atTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAg           >  2:2129762/1‑100 (MQ=255)

                                                                                    atTGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAg           >  1:670412/1‑100 (MQ=255)

                                                                                     ttGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTGTTTTCCCCGAGCAATTACGTGGCAGa          >  1:3190712/1‑100 (MQ=255)

                                                                                     ttGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGa          >  2:2752915/1‑100 (MQ=255)

                                                                                     ttGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGa          <  1:2509937/100‑1 (MQ=255)

                                                                                     ttGTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGa          >  2:1660769/1‑100 (MQ=255)

                                                                                      tattttAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGAt         >  2:3958251/3‑100 (MQ=255)

                                                                                       gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc        >  2:3499359/1‑100 (MQ=255)

                                                                                       gTTTTAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATc        >  2:1397606/1‑100 (MQ=255)

                                                                                        ttttAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCt       <  1:1306675/100‑1 (MQ=255)

                                                                                         tttAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCtt      >  2:2659425/1‑100 (MQ=255)

                                                                                           tAGAGCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCtttt    >  1:4027539/1‑100 (MQ=255)

                                                                                            agagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTc   >  1:1901167/1‑100 (MQ=255)

                                                                                             gagCGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCt  <  1:428736/100‑1 (MQ=255)

TGCGGGTCAGATGTAATGATTCACTCATTCCTTTTCTCCATTTTTGCTTTTTCAGGGACGACAACATCCCTGCAAAAAATGCATATTGTTTTAGAGTGTGATTATTAGCTGGCAGGGTAGTTCCCTGCTGTTTCATTTATTTCAGATTCTTTCTAATTATTTTCCCCGAGCAATTACGTGGCAGATCTTTTCT  >  NC_000913/36135‑36327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`