| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,806,158 | T→C | 35.6% | intergenic (‑75/‑212) | ydiY ← / → pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,806,158 | 0 | T | C | 35.6% | 135.9 / 151.0 | 155 | intergenic (‑75/‑212) | ydiY/pfkB | acid‑inducible putative outer membrane protein/6‑phosphofructokinase II |
| Reads supporting (aligned to +/- strand): ref base T (57/42); new base C (24/31); total (81/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
Only 100 of 156 total aligned reads displayed.
CAGGAACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTAT > NC_000913/1806059‑1806256 | cAGGAACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGt > 1:3259740/1‑100 (MQ=255) gAACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTccc > 2:714378/1‑100 (MQ=255) tGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGa > 2:2924696/1‑100 (MQ=255) gTCTCCAAACGCTTCATTTATCAAGAGTCCGTACAACAACAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTgg < 1:4196429/98‑1 (MQ=255) cTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAg > 2:4180593/1‑100 (MQ=255) cTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAg < 2:3167873/100‑1 (MQ=255) ttCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAgg > 1:180665/1‑100 (MQ=255) ttCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAgg > 2:2777192/1‑100 (MQ=255) ttCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAgg < 2:1107211/100‑1 (MQ=255) aaaaGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTaa < 2:94796/100‑1 (MQ=255) aaaaGCTTCATTTATCAAGAGTCCGTACAAAAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAg < 1:2306243/96‑1 (MQ=255) aaGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACg < 2:3069529/100‑1 (MQ=255) cTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAAt < 2:2224332/100‑1 (MQ=255) cTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAAt < 2:146757/100‑1 (MQ=255) ttCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAAtt < 1:1452391/100‑1 (MQ=255) tCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATta > 1:2381781/1‑100 (MQ=255) cATTTATCAAGAGTCCGTACAACAAACAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGAGCAAAGATTAGCGTCCCTGGAAAGGTAACGAATtat > 1:1301741/1‑100 (MQ=255) aTTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATtata > 2:2309071/1‑100 (MQ=255) aTTTATCAAGAGTACGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATtata < 1:2989308/100‑1 (MQ=255) tttATCAAGAGGCCGTACAACAAAAAAAGAGACCATCGCTGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaa < 1:1000749/100‑1 (MQ=255) tttATCAAGAGGCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaa < 1:1001152/100‑1 (MQ=255) tATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATaaaa > 1:1551993/1‑100 (MQ=255) tATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAACATTAGCGTCCCTGGAAAGGTAACGAATTATaaaa > 1:1590220/1‑100 (MQ=255) tATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTGAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaaaa > 2:1290112/1‑100 (MQ=255) aTCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaaaaa > 1:1176585/1‑100 (MQ=255) aTCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATaaaaa > 2:1493195/1‑100 (MQ=255) tCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAg > 2:1201719/1‑100 (MQ=255) tCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAg > 2:2845850/1‑100 (MQ=255) tCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAg > 2:2439565/1‑100 (MQ=255) cAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAgg > 2:3774668/1‑100 (MQ=255) aaGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGgc < 2:3759632/100‑1 (MQ=255) gagTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGgcgc < 1:1290108/100‑1 (MQ=255) gagTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGgcgc < 1:3403623/100‑1 (MQ=255) agaccGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGcgcg < 1:1056853/97‑1 (MQ=255) agTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGcgcg < 2:1854210/100‑1 (MQ=255) agTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGcgcg < 2:258576/100‑1 (MQ=255) cGTATAACAAAAAAAGAGACCATCGCCGTCCCGGAAACTTTCTTAAGAATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa < 1:3662800/100‑1 (MQ=255) cGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa > 2:744381/1‑100 (MQ=255) cGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa < 2:239069/100‑1 (MQ=255) cGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa < 2:238393/100‑1 (MQ=255) cGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATa < 2:3628702/100‑1 (MQ=255) gTACAACAAAAAAAGAGACCATCGCGGTCCCGGCAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAATGGTAACGAATTATAAAAAGGCGCGAATaa > 1:2571431/1‑100 (MQ=255) tACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAAc < 2:1919205/100‑1 (MQ=255) tACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAAc > 1:3119117/1‑100 (MQ=255) cgatctaaaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACt < 1:451662/94‑1 (MQ=255) caacaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAATGTAACGAATTATAAAAAGGCGCGAATAACtt < 1:750835/100‑1 (MQ=255) aacaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTa < 2:1450931/100‑1 (MQ=255) aacaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTa < 1:1511525/100‑1 (MQ=255) aacaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTa < 1:2707018/100‑1 (MQ=255) acaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAg < 1:3174779/100‑1 (MQ=255) acaaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAg < 2:1691921/100‑1 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGAAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc < 1:356483/100‑1 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc > 2:368946/1‑100 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc < 2:759923/100‑1 (MQ=255) caaAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGc > 1:1156890/1‑100 (MQ=255) aaaaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCa < 2:44594/100‑1 (MQ=255) aaaaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACtagatcg > 2:451664/1‑94 (MQ=255) caaaaccgaCCATCGCGGTCCCCGGAACTTTCTTAGGCACCCAAGATTACTGGCCCTTGAAAGTGAACGAACTCTACAAAGGCGCGAATAACTTAGCAAt < 1:647884/93‑1 (MQ=255) aaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATg < 1:2144252/100‑1 (MQ=255) aaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATg > 1:2760003/1‑100 (MQ=255) aaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATg < 1:926541/100‑1 (MQ=255) aaaaGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATg < 2:555547/100‑1 (MQ=255) agaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTc < 2:2422437/100‑1 (MQ=255) gaCCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCt < 2:3171549/100‑1 (MQ=255) ccATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTa > 2:921853/1‑100 (MQ=255) gcgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCa > 2:1756859/1‑100 (MQ=255) gcgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCa > 2:2741866/1‑100 (MQ=255) gcgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCa > 1:2107955/1‑100 (MQ=255) gcgGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCa > 2:347586/1‑100 (MQ=255) tCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAtttt > 1:807761/1‑100 (MQ=255) cccGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAttttt > 1:3879681/1‑100 (MQ=255) ccGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAtttttt > 1:3961023/1‑100 (MQ=255) ccGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCAtttttt < 2:1545139/100‑1 (MQ=255) cGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTg < 2:801843/100‑1 (MQ=255) cGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTg > 1:2856924/1‑100 (MQ=255) cGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTg > 2:308880/1‑100 (MQ=255) cGGAAACTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTg < 1:3027696/100‑1 (MQ=255) aaaCTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAAt < 2:3400818/100‑1 (MQ=255) aaCTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATa < 1:3729475/100‑1 (MQ=255) aCTTTCTTAAGGATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATaa < 2:2260385/100‑1 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAg > 1:992704/1‑100 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAg > 2:1173247/1‑100 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAg < 2:755867/100‑1 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAg > 2:1704004/1‑100 (MQ=255) cTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAACGTCACGAATTATAAAAAGGCGCCAATAACTTAGCACTGTATTCCTATTTCATTTTTTGAATaga > 1:3792300/1‑98 (MQ=255) tttCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAGAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGc < 1:3704563/100‑1 (MQ=255) tttCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAGAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGc > 2:3704579/1‑100 (MQ=255) ttCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCa < 2:1199281/100‑1 (MQ=255) ttCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCa < 2:2321841/100‑1 (MQ=255) tAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtgtg < 2:4166771/100‑1 (MQ=255) tAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCAtgtg < 2:4144754/100‑1 (MQ=255) aGGATCAAAGATTAGCTCCCCTGGAAAGGTAACTAATTATAAAAAGGCGCTAATAACTTAGCTATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGc < 1:1842670/100‑1 (MQ=255) ggATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCg > 1:3341727/1‑100 (MQ=255) gATCAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGa > 1:2870872/1‑100 (MQ=255) cAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGaaaa > 1:1249487/1‑100 (MQ=255) cAAAGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGaaaa > 2:1581901/1‑100 (MQ=255) aaaGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAAc > 2:1909867/1‑100 (MQ=255) aaaGATTAGCGCCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAAc < 1:1202330/100‑1 (MQ=255) gATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGa < 2:2856935/100‑1 (MQ=255) gTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTtttat > 2:3656452/1‑100 (MQ=255) | CAGGAACTGTCTTCAAAAGCTTCATTTATCAAGAGTCCGTACAACAAAAAAAGAGACCATCGCGGTCCCGGAAACTTTCTTAAGGATCAAAGATTAGCGTCCCTGGAAAGGTAACGAATTATAAAAAGGCGCGAATAACTTAGCAATGTATTCTTATTTCATTTTTTGAATAAGCATGTGGCGAAAACAGATTTTTAT > NC_000913/1806059‑1806256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |