| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,014,867 | A→G | 44.5% | I547V (ATA→GTA) | fliF → | flagellar basal‑body MS‑ring and collar protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,014,867 | 0 | A | G | 44.5% | 31.0 / 190.3 | 146 | I547V (ATA→GTA) | fliF | flagellar basal‑body MS‑ring and collar protein |
| Reads supporting (aligned to +/- strand): ref base A (32/49); new base G (19/46); total (51/95) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.09e-02 | |||||||||||
Only 100 of 160 total aligned reads displayed.
CGCGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCACC > NC_000913/2014768‑2014964 | cgcgcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGa > 1:2827724/1‑100 (MQ=255) gcgcTAACCAACGTCTGGGGGCAGAAGTCATGAGCTAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGat < 2:1504813/100‑1 (MQ=255) gcgcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGat < 2:3715110/100‑1 (MQ=255) cgcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCGGTGGata < 2:2241260/100‑1 (MQ=255) gcTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGgtaa > 2:3077687/1‑100 (MQ=255) cTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGataaa > 2:1228953/1‑100 (MQ=255) aaCCAACGTCTGGGGGCAGAAGTCATGAGTCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCATGGTGGCGCTGGTCATTCGCCAGTGGataaata < 1:2570872/100‑1 (MQ=255) ccAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAAc > 2:2321182/1‑100 (MQ=255) cGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATc < 2:4154273/100‑1 (MQ=255) cGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATc < 2:392701/100‑1 (MQ=255) gTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCa < 2:3134308/100‑1 (MQ=255) tCTGGGGGCAGAAGTCATGAGCCGGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCAt < 1:1813288/100‑1 (MQ=255) tCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCAt > 2:902903/1‑100 (MQ=255) cTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATg < 2:1044813/100‑1 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGan < 1:2685875/100‑2 (MQ=255) gggggCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAg > 2:4266065/1‑100 (MQ=255) cAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAAcc < 1:3713944/100‑1 (MQ=255) cAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAAcc < 1:4000493/100‑1 (MQ=255) gAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTg > 1:1346572/1‑100 (MQ=255) aaGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGa > 1:3882564/1‑100 (MQ=255) gTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACa > 2:2791506/1‑100 (MQ=255) cATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAgg > 1:1604534/1‑100 (MQ=255) aTGAGCCAGCGTATCCTTTAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGc < 2:14426/100‑1 (MQ=255) aTGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGc < 2:3994588/100‑1 (MQ=255) aTGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGc < 2:419806/100‑1 (MQ=255) gAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGTCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGAcn < 1:2121312/95‑2 (MQ=255) gAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCAc < 2:1774245/100‑1 (MQ=255) aGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCAcc > 1:2166604/1‑100 (MQ=255) aGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTCGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCAcc < 2:1431389/100‑1 (MQ=255) aGCCAGCATATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCAcc > 1:3057655/1‑100 (MQ=255) gCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGTTCATGAGTAACCTGACAGGCACCg < 1:704148/100‑1 (MQ=255) gCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCAc > 1:478726/1‑98 (MQ=255) ccAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGa < 1:2827847/100‑1 (MQ=255) ccAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGa > 2:2137277/1‑100 (MQ=255) aGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATa > 2:4191494/1‑100 (MQ=255) gCGTAGCCGTGAAACGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATaa < 1:2906707/100‑1 (MQ=255) gTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAGATAACGATCATGAGCAACCTGACAGGCACCGATaaaa > 1:2889456/1‑100 (MQ=255) gTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATaaaa > 2:2526509/1‑100 (MQ=255) tATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAg < 2:2822944/100‑1 (MQ=255) tATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAg < 1:483865/100‑1 (MQ=255) tCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCg < 2:1750506/100‑1 (MQ=255) ccGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGt > 1:4118190/1‑100 (MQ=255) ccGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGt < 2:2956393/100‑1 (MQ=255) cGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTc > 1:669404/1‑100 (MQ=255) cGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTc > 1:2713907/1‑100 (MQ=255) gTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCa > 1:4095818/1‑100 (MQ=255) gTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGAGCAGGAGTAACCTGACAGGCACCGATAAAAGCGTCa > 2:3213889/1‑100 (MQ=255) aaaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATcc < 2:231803/100‑1 (MQ=255) aaaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATcc < 1:79483/100‑1 (MQ=255) aaaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATcc < 2:3329389/100‑1 (MQ=255) aaaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATcc < 2:785378/100‑1 (MQ=255) aaTGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCct < 2:1168261/100‑1 (MQ=255) aTGTCTGATAACGATCCGCGCGTGGTGGCTCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctg < 1:2561725/100‑1 (MQ=255) tGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgc < 2:350215/100‑1 (MQ=255) gTCTGATAGCGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct < 2:1489571/100‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct < 1:2388325/100‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct < 1:1150544/100‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct < 2:1899165/100‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACTATAATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgc < 1:1609983/99‑1 (MQ=255) gTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgct > 1:2521534/1‑100 (MQ=255) tCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgctg < 2:3231818/100‑1 (MQ=255) tCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgctg < 1:1024545/100‑1 (MQ=255) tCTGATAACGAGCCGCGCGTGGTGGCGCTGGTCAGTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCctgctg < 2:4036408/100‑1 (MQ=255) cTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtga > 2:1963045/1‑100 (MQ=255) tGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtgat > 1:3897244/1‑100 (MQ=255) gATAACTATCCGCGCCTGGTGGCCCTCCTCATCCGCCACTGGATAAATAACGATCAAAAATAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtgatt < 1:3555325/100‑2 (MQ=255) gATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCtgatg < 2:2734813/100‑1 (MQ=255) tAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGAc < 2:4128707/100‑1 (MQ=255) aCGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTTGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCa < 2:880964/100‑1 (MQ=255) aCGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCa > 1:1123571/1‑100 (MQ=255) cgcgcgTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGGTCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACAATTGGCg < 1:390949/100‑1 (MQ=255) cgcgcgTGGTGCCGCTGGTAATTCGACAGTGGATAAATCACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTAATCCTGCTGATGACCATTGGc > 1:850934/1‑99 (MQ=255) gcgcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGa < 1:3289299/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 2:2973030/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 1:2935244/100‑1 (MQ=255) gcgTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAg < 2:751220/100‑1 (MQ=255) tggtggCGCTGGTCATTTGCCAGTGGGAAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTAATCCTGCTGATGACCATTGGCGAAGAc > 1:758712/1‑99 (MQ=255) tGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCag < 2:2472018/100‑1 (MQ=255) ggTCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCaga < 2:3833525/100‑1 (MQ=255) tCATTCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACGGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAgg < 2:1560627/100‑1 (MQ=255) tCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAgg < 1:589463/100‑1 (MQ=255) tCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAgg > 1:938000/1‑100 (MQ=255) aTTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtg < 2:241254/100‑1 (MQ=255) ttCGCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtgt < 1:2791495/100‑1 (MQ=255) gCCAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCa < 1:967920/100‑1 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCa > 2:2174897/1‑100 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCa < 2:1806546/100‑1 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCa < 2:1254922/100‑1 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCa > 1:1820978/1‑100 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCAGCCTGCAGATGACCATTGACGAAGACCGGGCCTCAGAGgtag > 1:888211/1‑95 (MQ=255) gCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGGCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTc > 1:3651323/1‑99 (MQ=255) ccAGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCaa < 1:3077675/100‑1 (MQ=255) ccAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCaa < 2:3640727/100‑1 (MQ=255) aGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGc < 2:1703461/100‑1 (MQ=255) aGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGc < 1:2321176/100‑1 (MQ=255) aGTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGc < 2:841132/100‑1 (MQ=255) gTGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGgtgcttgaaca < 2:1676650/100‑9 (MQ=255) gTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCa < 1:1573251/100‑1 (MQ=255) tGGGTAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCAc > 2:3423084/1‑100 (MQ=255) ggATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCAcc < 1:2526502/100‑1 (MQ=255) | CGCGCTAACCAACGTCTGGGGGCAGAAGTCATGAGCCAGCGTATCCGTGAAATGTCTGATAACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATAAATAACGATCATGAGTAACCTGACAGGCACCGATAAAAGCGTCATCCTGCTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTCAAGCACC > NC_000913/2014768‑2014964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |