| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,019,158 | G→A | 43.6% | S258N (AGT→AAT) | fliK → | flagellar hook‑length control protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,019,158 | 0 | G | A | 43.6% | 60.9 / 160.0 | 134 | S258N (AGT→AAT) | fliK | flagellar hook‑length control protein |
| Reads supporting (aligned to +/- strand): ref base G (41/34); new base A (31/27); total (73/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.01e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
CCGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATCA > NC_000913/2019059‑2019257 | ccGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAg < 1:3674980/100‑1 (MQ=255) gtccctgcACCTGTTTTGAGTGTACCGCGGGGTTCTCACGAATGGCAACAAGCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTg < 2:1419045/94‑1 (MQ=255) tCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATAGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGc < 2:761936/100‑1 (MQ=255) cgccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCa > 1:4034994/1‑100 (MQ=255) cgccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCa > 1:1300993/1‑100 (MQ=255) cgccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCa < 1:1328740/100‑1 (MQ=255) cgccgcACCTGATTTGAGTGCAACGCTGGGTTCACACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGAAGAAACAAAATGc < 1:887418/99‑1 (MQ=255) gccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCag < 1:2208344/100‑1 (MQ=255) ccgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCaga < 2:221360/100‑1 (MQ=255) cgcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCagag < 1:1998601/100‑1 (MQ=255) gcACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGt < 2:2513817/100‑1 (MQ=255) aCCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTg < 1:1155589/100‑1 (MQ=255) cTGTTTTGAGTGCAACGCTGGGTTCTTACGTATCGCTTCTTTCATTACGCCAGCATGTTTTGCGGATTACCCGCTAAGGGGCCCAAATTGCagttttggg > 1:2177294/1‑93 (MQ=255) tGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGt > 2:284120/1‑100 (MQ=255) tGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGt > 1:3081317/1‑100 (MQ=255) tGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGt > 2:287631/1‑100 (MQ=255) gTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTc < 2:3049059/100‑1 (MQ=255) tttGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTg > 2:2562662/1‑100 (MQ=255) nttGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTg > 2:2403146/2‑100 (MQ=255) ttGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGc > 2:627974/1‑100 (MQ=255) tGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGc > 1:2974021/1‑99 (MQ=255) gTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGGAACAAAGTGCAGAGTTGCGTCTGCAc > 1:4265224/1‑98 (MQ=255) cACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCa < 2:227140/100‑1 (MQ=255) aCCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAg > 2:2579256/1‑100 (MQ=255) ccGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAgg > 2:4072068/1‑100 (MQ=255) ccGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTACACCCGCCACGGGCACCAAAATGCAGAGTTGCGTCTGCACCCGCAgg > 1:2889919/1‑100 (MQ=255) tGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGAttt < 2:3724641/100‑1 (MQ=255) tGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGAttt < 1:3554065/100‑1 (MQ=255) gggTCCTCACGAATGGCAACAATCAGTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGTACCCGCAGGATTTa < 1:1003263/100‑1 (MQ=255) gTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAgg < 2:2978681/100‑1 (MQ=255) gTTCTCACGAACGTCAACAACCATTAAGCCAGCAAATTTCGCTGTCCTCCCGCCAGGGGCAACAAAGTGCAGAGGGGCGTCTGCACCCGCAGGATTGAgg < 1:835250/100‑1 (MQ=255) ttCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTAACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGCACTTAggg > 1:781431/1‑99 (MQ=255) tctcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTg < 2:640384/100‑1 (MQ=255) ctcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGa > 2:4003281/1‑100 (MQ=255) ctcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGa > 2:1135706/1‑100 (MQ=255) tcACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGaa > 2:2405947/1‑100 (MQ=255) cACGAATGGCAACAATCATTAAGGCAGCATATTTCGCTGTTCACCCGCCAGGGGCAAAAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAg > 1:2108831/1‑100 (MQ=255) cACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACGAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAg > 2:102648/1‑100 (MQ=255) cACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAg > 2:1841883/1‑100 (MQ=255) aCGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAAGGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGt < 1:2624980/100‑1 (MQ=255) cGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTg < 1:2902503/100‑1 (MQ=255) cGAATGGCAACAATCATTAAGCCAGAATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTg > 1:641229/1‑100 (MQ=255) gAATGGCAACAATCATTATGCCGGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGa < 1:3497478/95‑1 (MQ=255) gAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGc < 2:1459132/100‑1 (MQ=255) tGGCAACCATCATTAAGCAAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCATAGTTGCGTCTGCACCCGCAGGAGTGAGGTTAAGTGCaaa > 1:1848024/1‑100 (MQ=255) tGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCaaa > 2:1111205/1‑100 (MQ=255) caacaaTCATTAATCCAGCATATTTCGCTGTTCACCCGCCATGCGCAACAAAGTGCAGAGTTACGTCTGCACCCCCAGGGTTTAGGTGAAGTGCAAAtct > 1:2859616/1‑100 (MQ=255) caacaaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAtct > 1:1852470/1‑100 (MQ=255) caacaaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAtc > 2:183233/1‑99 (MQ=255) acaaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTcc > 1:687263/1‑100 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc < 2:2665541/100‑1 (MQ=255) caaTCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTccc < 2:2255406/100‑1 (MQ=255) tgaTTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCTGGATTTAGGTGAAGTGCAAATCTCCCTc < 2:1099014/97‑1 (MQ=255) cATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCaa > 1:3148267/1‑100 (MQ=255) cATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCaa < 1:3543801/100‑1 (MQ=255) ttAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAg < 2:3471390/100‑1 (MQ=255) aaGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTg > 1:2495478/1‑100 (MQ=255) aaGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTg < 1:3039753/100‑1 (MQ=255) gCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGga > 2:2769018/1‑100 (MQ=255) cAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatg < 1:3230315/100‑1 (MQ=255) cAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatg < 2:3764443/100‑1 (MQ=255) aGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatga < 1:2769007/100‑1 (MQ=255) aGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGgatga < 1:845382/100‑1 (MQ=255) tatTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAAc > 2:52293/1‑100 (MQ=255) atTTCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAAcc > 2:1332687/1‑100 (MQ=255) tttCGCTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATagatc > 1:280972/1‑96 (MQ=255) tCGCTGTTCAACCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGTATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAgg > 1:295113/1‑100 (MQ=255) cGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgc > 1:1130544/1‑100 (MQ=255) cGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgc < 1:3337357/100‑1 (MQ=255) cTGTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGgcgc > 1:1222311/1‑100 (MQ=255) gTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCaa > 2:1685018/1‑100 (MQ=255) gTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAACTCTCCCTCAAAGTGGATGATAACCAGgcgc > 1:4050268/1‑98 (MQ=255) gTTCACCCGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGACTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACAAGgcgc > 1:1000030/1‑98 (MQ=255) ttCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCaaa > 2:495619/1‑100 (MQ=255) tCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAAt > 2:731665/1‑100 (MQ=255) cACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATc > 1:1746373/1‑100 (MQ=255) aCCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATcc > 1:3288344/1‑100 (MQ=255) cccGCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCa < 2:1721678/100‑1 (MQ=255) gCCAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGa < 1:3826724/99‑1 (MQ=255) ccAGGGGCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATg < 1:3125477/100‑1 (MQ=255) cAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATgg < 2:3148279/100‑1 (MQ=255) cAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATgg > 1:1454445/1‑100 (MQ=255) ggggCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGtt > 2:3871556/1‑100 (MQ=255) ggggCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGtt > 1:1134548/1‑100 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTc > 1:2887457/1‑99 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa < 2:3336859/100‑1 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa > 1:2110400/1‑100 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa > 1:4247785/1‑100 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa < 2:159842/100‑1 (MQ=255) gCAACAAAATGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCa > 2:4152580/1‑100 (MQ=255) aacaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCAcc < 2:1063759/100‑1 (MQ=255) aacaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCAcc < 2:3198957/100‑1 (MQ=255) aacaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGAAGAAGTACAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCAcc < 1:1686439/100‑1 (MQ=255) acaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGGAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCg > 1:2334542/1‑100 (MQ=255) acaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCg > 2:585341/1‑100 (MQ=255) acaaAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATATCCCTAAAACTGGCTGATAACCAGGAGCAAATCCAGATGGTTTCa > 1:179096/1‑97 (MQ=255) aaaaTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCa < 1:1439767/100‑1 (MQ=255) aGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATc < 1:3737002/100‑1 (MQ=255) gTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAAGCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATCa < 1:4021866/100‑1 (MQ=255) gTGCAGAGTTGCGTCTGCACCAGCAGGCATTCGGTGCACTGCAAATCTCACTCCCAGCCGATGATAACCCGCCGCAAATCCAGTTGGTTTCACCGCATCa < 1:1419941/100‑1 (MQ=255) | CCGTCGCCGCACCTGTTTTGAGTGCACCGCTGGGTTCTCACGAATGGCAACAATCATTAAGCCAGCATATTTCGCTGTTCACCCGCCAGGGGCAACAAAGTGCAGAGTTGCGTCTGCACCCGCAGGATTTAGGTGAAGTGCAAATCTCCCTCAAAGTGGATGATAACCAGGCGCAAATCCAGATGGTTTCACCGCATCA > NC_000913/2019059‑2019257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |