| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,229,392 | A→G | 41.1% | intergenic (+327/+46) | yohP → / ← dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,229,392 | 0 | A | G | 41.1% | 71.1 / 162.0 | 144 | intergenic (+327/+46) | yohP/dusC | uncharacterized protein/tRNA‑dihydrouridine synthase C |
| Reads supporting (aligned to +/- strand): ref base A (38/46); new base G (25/34); total (64/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
CCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCAGGGGAATT > NC_000913/2229295‑2229491 | ccTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGtt < 2:2929330/100‑1 (MQ=255)ccTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGtt < 2:1413028/100‑1 (MQ=255)ccTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGtt < 1:1660418/100‑1 (MQ=255)ccTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTAtt < 1:440282/100‑1 (MQ=255)ccTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGACAATTTTGACGCCACCAAACAACCGTGCGGCCTAtt > 2:2999396/1‑100 (MQ=255) cTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTg > 2:185400/1‑100 (MQ=255) cTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTg > 1:1360698/1‑100 (MQ=255) tGTAAAACGCGCCCTCAGCCCACATCCATGTGTGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGa < 1:1839304/100‑1 (MQ=255) gTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGAt < 2:3417015/100‑1 (MQ=255) tAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATa < 1:3809276/100‑1 (MQ=255) tAAAACGCGCCCTCACCCCACATCCATGTGGGCTACCCCGGCCTTCAGTGAACGCCTCGTCAATTTTGACGCCACCAAACAACCCTGCGGCCTGCTGATa > 1:3403190/1‑100 (MQ=17) tAAAACGAGTTCTCATCCCAGATTCATGTGTGCTGCCCCTGCCTTCAGGGAACGCCTCAGCAATTTTAACGTCACTAAACATCCGTGCGGCATGTTGATa < 1:3315281/100‑1 (MQ=12) aaaaCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAGCGCCTCGTCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATaa < 1:2986333/100‑1 (MQ=255) aaaaCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATaa < 1:575970/100‑1 (MQ=255) aaaCGCGCCCTCAGCCCACATCCATGTGGGCCGCCCCGGCCTTCAGGGCACGCCTCGGCAATTCTGAAGCCACCCAACAACCGTGCGGCCTCTTGATaca > 1:2724624/1‑98 (MQ=17) aaCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAag > 1:1583348/1‑100 (MQ=255) aCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAaga < 1:640980/100‑1 (MQ=255) aCGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAaga < 1:2858708/100‑1 (MQ=255) cgcgCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAagag > 1:3056156/1‑100 (MQ=255) cgcgCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAagag < 1:675944/100‑1 (MQ=255) cgcgCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAagag > 2:1631290/1‑100 (MQ=255) gcgcCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGc < 1:1765596/100‑1 (MQ=255) gcgcCCGCAGCCTACATCCATGTGGGCTGCCCCGGCCTTCGGGGACCGCCTCGGCAGTTTTGCCGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGc > 1:3568640/1‑100 (MQ=21) cgcCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTGAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCt > 1:2640955/1‑100 (MQ=255) ccggggcAGCCCACATGGATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCt > 2:3472090/7‑100 (MQ=21) gcCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTa < 2:1155021/100‑1 (MQ=255) gcCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTa < 1:762809/100‑1 (MQ=255) gcCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTa < 1:1086770/100‑1 (MQ=255) gggcAGCCCACATGGATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAac > 2:2154550/4‑100 (MQ=21) cTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAaca < 1:165225/100‑1 (MQ=255) cTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAaca < 2:1173598/100‑1 (MQ=255) cTCAGCCCACATCCATGTGGGCTGCCCCGGCCTCCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAaca < 1:3877409/100‑1 (MQ=255) gcAGCCCACATGGATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACACTCGTGCGGCCTATTGATAAAGAGCTAacac > 2:353380/2‑100 (MQ=21) cAGCCCACATGGATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAAcaca > 2:2270250/1‑100 (MQ=255) cAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAAcaca < 2:1576321/100‑1 (MQ=255) cAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAAcaca > 1:3537420/1‑100 (MQ=255) aGCCCACATGGCTGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCTTGCGGCCTGTTGATAAAGAGCTAACACAt > 1:2046693/1‑100 (MQ=21) aGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACAt > 1:1161156/1‑100 (MQ=255) aGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACAt < 2:4226512/100‑1 (MQ=255) cccACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTg < 2:2692460/100‑1 (MQ=255) ccACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGt < 1:1269496/100‑1 (MQ=255) ccACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCCGTTGATAAAGAGCTAACACATTGt > 2:2210090/1‑100 (MQ=255) cacaTCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTc > 2:1583502/1‑100 (MQ=255) acaTCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCa < 2:194717/100‑1 (MQ=255) acaTCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCa < 2:812825/100‑1 (MQ=255) acaTCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGCGCGGCCTATTGATAAAGTGCTAACACAtttt < 2:2877933/98‑3 (MQ=255) tggaTGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCaaaa > 1:3367997/4‑100 (MQ=255) cATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCaaaaaa > 2:1010196/1‑100 (MQ=255) cATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCaaaaaa < 1:3035845/100‑1 (MQ=255) cATCTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCCATTTTGACGCCACCTAACAACCGTGCGGCCTGTTGATAACGAGCTAACACATTGTCaaaaa > 1:2890060/1‑99 (MQ=25) gtgGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACAt > 2:2096553/1‑100 (MQ=255) gtgGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCAGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACAt > 1:1429477/1‑100 (MQ=255) tgGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATc > 1:3421593/1‑100 (MQ=255) tgGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATc < 2:322399/100‑1 (MQ=255) gggCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCa > 2:2736661/1‑100 (MQ=255) gggCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCa > 2:1251111/1‑100 (MQ=255) ggCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCAc > 1:2427775/1‑100 (MQ=255) ggCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCAc < 1:2342104/100‑1 (MQ=255) ggCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGAGAAAGAGCTAACACATTGTCAAAAAACATCACTATGGtttt < 2:2122491/100‑1 (MQ=255) ccTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGtttttt < 1:3837365/100‑1 (MQ=255) cTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTa > 2:700219/1‑100 (MQ=255) cTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTa > 2:2469328/1‑100 (MQ=255) tCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTaga < 2:3588484/100‑1 (MQ=255) tCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTaga < 2:879702/100‑1 (MQ=255) cAGGTAACGCCTCGGCAATTTTGACGCCACCAAACACCCGTGCGGCCTATTGATAAATAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTagag < 1:2056093/100‑1 (MQ=255) cAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTagan < 1:1493447/100‑2 (MQ=255) cAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTagag > 2:1495026/1‑100 (MQ=255) aGGGAACGCCTCGGTCATTTTACCGCCACCAAACAACATTGCGGCCTGTTGATAATTAGCTAAAAAAAAATAAAAAAACATCACTATGGtttttt < 1:812130/95‑1 (MQ=255) gggAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGtt > 1:3687102/1‑100 (MQ=255) cGCCTCGTCTATTTTGACGCCACCCAACTACCCTGCTGCCTATTGATGAACAGCTAACACATTGTCACCAACCTTCAGGATGGTTTTTTAGGGTTtc < 1:1778042/97‑1 (MQ=255) cGCCTCGGCAATTTTGACGCCACCAACCAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCg < 2:220351/100‑1 (MQ=255) cGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCg < 1:2401752/100‑1 (MQ=255) gCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGa > 2:2322610/1‑100 (MQ=255) ccTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGCTAAAGAGCTAACAAATTGTCAAAAAACATCACTATGGTTCTTTAGAGGTTCTCGat > 1:2471669/1‑100 (MQ=255) tCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGatat < 2:4227989/100‑1 (MQ=255) cGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCTAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATc < 1:2621551/100‑1 (MQ=255) cAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAAt < 2:3614345/100‑1 (MQ=255) ttttGACGCCACCAAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGCTTCTTAGAGTTTCTCGATATCAATTGc > 1:3301376/1‑100 (MQ=255) tttGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGcc < 2:3930943/100‑1 (MQ=255) tGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTg < 1:4166144/100‑1 (MQ=255) tGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTg < 1:1182564/100‑1 (MQ=255) cGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAAt > 2:386557/1‑100 (MQ=255) caccaAACAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGc < 1:1140284/100‑1 (MQ=255) ccaAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTCTTTAGAGTTTCTCGATATCAATTGCCTGAATAGccc > 1:2836142/1‑100 (MQ=255) caAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCt > 2:3290578/1‑100 (MQ=255) caAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCt < 2:3343502/100‑1 (MQ=255) caAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCt > 1:1580390/1‑100 (MQ=255) aaaCAACCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCtt > 2:4080801/1‑100 (MQ=255) aaaCAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCtt < 2:245647/100‑1 (MQ=255) acaacCGTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGc < 2:4144185/100‑1 (MQ=255) acaacCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGc < 1:3019805/100‑1 (MQ=255) acaacCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGc < 1:2787140/100‑1 (MQ=255) caacCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCTCTTGCa > 1:2946636/1‑100 (MQ=255) aacCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCaa > 2:680760/1‑100 (MQ=255) gTGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATc > 1:2821854/1‑100 (MQ=255) tGCGGCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCa < 2:3214751/100‑1 (MQ=255) ggCCTGTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCAggg < 1:1116607/100‑1 (MQ=255) tATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCAGGGGAat > 1:3178676/1‑100 (MQ=255) aTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCAGGGGAatt > 2:2625722/1‑100 (MQ=255) aTTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCACTTGCAATATCAGGGTAat > 2:1743836/1‑99 (MQ=255) | CCTGTAAAACGCGCCCTCAGCCCACATCCATGTGGGCTGCCCCGGCCTTCAGGGAACGCCTCGGCAATTTTGACGCCACCAAACAACCGTGCGGCCTATTGATAAAGAGCTAACACATTGTCAAAAAACATCACTATGGTTTTTTAGAGTTTCTCGATATCAATTGCCTGAATAGCCCTTGCAATATCAGGGGAATT > NC_000913/2229295‑2229491 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |