| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,269,044 | T→C | 40.0% | F64S (TTC→TCC) | lpxT → | lipid A 1‑diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1‑phosphate phosphotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,269,044 | 0 | T | C | 40.0% | 93.0 / 156.1 | 142 | F64S (TTC→TCC) | lpxT | lipid A 1‑diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1‑phosphate phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base T (39/46); new base C (26/31); total (65/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGG > NC_000913/2268945‑2269142 | ggTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTTTTTTTTTTTTCATTGACCAACAATCGCGCCtt > 1:2500034/1‑100 (MQ=255)ggTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCtt > 1:304815/1‑100 (MQ=255) gTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTc > 2:1886652/1‑100 (MQ=255) gTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTc < 2:3911980/100‑1 (MQ=255) gCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGAc > 2:2458798/1‑100 (MQ=255) gCCGATTGATGCGGATAGTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGAc < 2:2170308/100‑1 (MQ=255) ccGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACg > 2:1062416/1‑100 (MQ=255) ttGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGgttg < 1:3377229/100‑1 (MQ=255) ttGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGgttg < 2:2184209/100‑1 (MQ=255) ttGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGgttg < 1:1138220/100‑1 (MQ=255) gATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGgttgtt < 2:2148697/100‑1 (MQ=255) aTGCGGTTATTTTTTATTTCTTTAAGCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTTGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTc < 1:861368/100‑1 (MQ=255) aTGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTc < 2:1991584/100‑1 (MQ=255) aTGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTc > 2:3617999/1‑100 (MQ=255) gCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCAc < 1:1983787/100‑1 (MQ=255) gCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCAc > 2:3788128/1‑100 (MQ=255) ggATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCActg > 2:1014778/1‑100 (MQ=255) gATATTTTTTATTTCTTTAATCAGAAGCTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCActgc < 2:1842650/100‑1 (MQ=255) atTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTgg < 1:2184524/100‑1 (MQ=255) ttttttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGc < 1:2974961/100‑1 (MQ=255) tttttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGGTCACTGCTGGCg < 2:2807637/100‑1 (MQ=255) ttttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGa < 2:2413641/100‑1 (MQ=255) tttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGAt < 2:166393/100‑1 (MQ=255) tttATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGAt > 2:2115313/1‑100 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATgg < 1:3484899/100‑1 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATgg < 1:3484035/100‑1 (MQ=255) tATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATgg > 1:2104933/1‑100 (MQ=255) aTTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATggg > 1:2716433/1‑100 (MQ=255) aTTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATggg < 2:739735/100‑1 (MQ=255) tttCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGt > 2:2111098/1‑100 (MQ=255) ttCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTa > 2:352256/1‑100 (MQ=255) tCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTAt < 1:700373/100‑1 (MQ=255) cTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTTTTTTTTTTTTTATTGACCAACAATCGCGCCTTCGACGGTTGTTTACTGCTGGCGATGGGTATg > 1:1527448/1‑100 (MQ=255) cTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATg > 2:2202457/1‑100 (MQ=255) ttAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTTTTTTTGTTTTCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGt > 1:2520850/1‑99 (MQ=255) tAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTg > 2:1171099/1‑100 (MQ=255) aaTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGa < 1:2458792/100‑1 (MQ=255) aaTCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGa < 1:4175554/100‑1 (MQ=255) tCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATg < 1:1824098/100‑1 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATg > 2:316080/1‑99 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGc < 2:1648751/100‑1 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGc < 1:3126266/100‑1 (MQ=255) cAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGc > 2:3746633/1‑100 (MQ=255) aGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCt > 1:2690102/1‑100 (MQ=255) aGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCt > 1:292071/1‑100 (MQ=255) gAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTg > 1:2792978/1‑100 (MQ=255) gAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTg < 2:4033344/100‑1 (MQ=255) aaCTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAg < 1:3687193/100‑1 (MQ=255) ggTCGAAAGTAAGGCCTTTTTTTTTTTTTTTTCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGCTGCTGAGGTTc > 1:4277916/1‑100 (MQ=255) ggTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTc > 2:3586922/1‑100 (MQ=255) tCGAAAGTAAGGCCTTTTTGTGGCTAGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTg > 2:744472/1‑100 (MQ=255) cGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTgg > 2:3397637/1‑100 (MQ=255) cGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTgg < 1:1892836/100‑1 (MQ=255) cGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTgg > 1:1230166/1‑100 (MQ=255) cGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTgg > 1:3037354/1‑100 (MQ=255) gAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGc < 2:1026674/100‑1 (MQ=255) gAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGc < 2:3221667/100‑1 (MQ=255) aaaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACGAACAATCCCGCTTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCt < 1:3001985/100‑1 (MQ=255) aaaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCt < 2:476266/100‑1 (MQ=255) aaaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCt < 2:841706/100‑1 (MQ=255) aaaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCt < 1:362745/100‑1 (MQ=255) aaGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTg < 1:534034/100‑1 (MQ=255) aGTAAGGCCTTTTTTTTTTTTTTTTCATTGACCAACAACCGCGCCTTTGACGGTTGTTCACTGCTGGCGATGGGTCTGTTGTTGCTGAGTTTCTGGCt > 1:1762374/1‑98 (MQ=255) gTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCTCCTCCGACTGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaa < 1:884926/100‑1 (MQ=255) gTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaa > 2:853120/1‑100 (MQ=255) aaGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaag < 2:584083/100‑1 (MQ=255) aaGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaag < 2:4250720/100‑1 (MQ=255) aaGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaag > 2:4264915/1‑100 (MQ=255) ggCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaagaa > 2:3961046/1‑100 (MQ=255) ggCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaagaa > 2:683380/1‑100 (MQ=255) gCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTgaaagaaa > 1:567507/1‑100 (MQ=255) ccTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGaaaa < 1:3832626/100‑1 (MQ=255) cTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAAc < 1:3690425/100‑1 (MQ=255) ttGTGGCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGccc < 2:2925753/100‑1 (MQ=255) tgtgGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGcccc < 1:1062413/100‑1 (MQ=255) gCTGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGc < 1:1701035/100‑1 (MQ=255) cTGGTTGCTTTGACCAACAAGCGCGCCCTAGAGGGTTGTGGACGTCTGGCGATGGGTAGGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCt < 1:4042143/96‑1 (MQ=255) cTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGc < 1:4244080/99‑1 (MQ=255) tGGTTGCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAg > 2:3230816/1‑100 (MQ=255) gCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacgag > 2:633045/1‑99 (MQ=255) gCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacgac > 2:3728709/1‑100 (MQ=255) gCATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAgacgac > 2:208467/1‑100 (MQ=255) cATTGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGacgacg > 2:2014219/1‑100 (MQ=255) ttGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTa < 2:52129/100‑1 (MQ=255) ttGACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTa > 2:379536/1‑100 (MQ=255) gACCAACAATCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATc > 1:1602571/1‑100 (MQ=255) aCCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCg > 1:3420253/1‑100 (MQ=255) caacaaTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAACACGCCCCTGGCAGACGACGTATGGTg > 1:3971638/1‑100 (MQ=255) caacaaTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTg > 1:3035859/1‑100 (MQ=255) caaTCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGat < 1:3787694/99‑1 (MQ=255) aaTCGCGCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGatt > 1:761638/1‑99 (MQ=255) cgcgCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtg < 1:1883738/100‑1 (MQ=255) cgcgCCTCCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtg > 1:2354743/1‑100 (MQ=255) gcgcCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtgg > 2:223230/1‑100 (MQ=255) gcgcCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtgg < 1:1014775/100‑1 (MQ=255) gcgcCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGGTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtgg > 2:1374479/1‑100 (MQ=255) ccTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggtct < 2:464612/100‑1 (MQ=255) ccTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggtct > 1:1595093/1‑100 (MQ=255) ccTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGAAGACGACGTATCGTGATTATtggtct < 2:2590526/100‑1 (MQ=255) tCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATtggtctgg < 1:1717511/99‑1 (MQ=255) | GGTTGCCGATTGATGCGGATATTTTTTATTTCTTTAATCAGAAACTGGTCGAAAGTAAGGCCTTTTTGTGGCTGGTTGCATTGACCAACAATCGCGCCTTCGACGGTTGTTCACTGCTGGCGATGGGTATGTTGATGCTGAGTTTCTGGCTGAAAGAAAACGCCCCTGGCAGACGACGTATCGTGATTATTGGTCTGG > NC_000913/2268945‑2269142 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |