| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 358,599 | G→A | 45.5% | A31V (GCG→GTG) | cynR ← | transcriptional activator of cyn operon; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 358,599 | 0 | G | A | 45.5% | 62.7 / 224.1 | 180 | A31V (GCG→GTG) | cynR | transcriptional activator of cyn operon; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (47/51); new base A (40/42); total (87/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
AGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACC > NC_000913/358501‑358698 | aGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAgcgc < 1:2338799/100‑1 (MQ=255) gACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCa > 1:147152/1‑100 (MQ=255) aCTTCTCCTGCATCAGTGAGCCGAATCGTTCGCCCGCTACGGTCAACCAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAg < 1:1988546/100‑1 (MQ=255) cTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAgg < 2:2410316/100‑1 (MQ=255) ctcCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTg > 2:2129415/1‑100 (MQ=255) ctcCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTg < 2:688922/100‑1 (MQ=255) ctcCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTg < 1:2136592/100‑1 (MQ=255) cTGCATCAGTGAGCCGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGga < 2:1691867/100‑1 (MQ=255) tGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGgag > 1:2711538/1‑100 (MQ=255) gCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGgaga > 2:3311466/1‑100 (MQ=255) aTCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACg < 2:2514886/100‑1 (MQ=255) aTCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACg < 2:977680/100‑1 (MQ=255) naGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTg > 1:499073/2‑100 (MQ=255) aGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTg < 2:1010495/99‑1 (MQ=255) aGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGc > 2:1940241/1‑100 (MQ=255) aGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGc < 1:1604264/100‑1 (MQ=255) aGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGc < 2:2774373/100‑1 (MQ=255) tGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCan < 2:4213736/100‑2 (MQ=255) gagaCGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAAc > 2:4221115/1‑100 (MQ=255) gaCGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGc > 2:1544207/1‑100 (MQ=255) aTCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTgg < 1:3167553/100‑1 (MQ=255) tCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTggc < 2:2715915/100‑1 (MQ=255) cGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACGCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggcg > 1:2624181/1‑100 (MQ=255) gTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggctg > 1:2596589/1‑98 (MQ=255) gTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggcgg > 1:3629318/1‑100 (MQ=255) gTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggcgg > 1:3468032/1‑100 (MQ=255) gTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTggcgg > 1:3432710/1‑100 (MQ=255) gTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACCGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggcgg < 1:2219264/100‑1 (MQ=255) ttCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTggcggc > 1:788327/1‑100 (MQ=255) cGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAACGTGCAGGATGGGAGACGTGCAACGCACTGGCGGCAc > 2:713429/1‑100 (MQ=255) gCCCGCTACGGTCAACCAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACg < 1:4276692/100‑1 (MQ=255) gCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACg > 1:2863215/1‑100 (MQ=255) gCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACg < 1:1742047/100‑1 (MQ=255) cccGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTggcagcttca > 2:1066952/1‑93 (MQ=255) accGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTGTAACTGTCGACCCTGCTGGGAAAGCGCCGGTTGGCAGCCGTGCAACGCACTGGCGGCACg > 1:3808498/2‑99 (MQ=255) aCGGTCAATCAGCGCCACGCCTAAACCCTCCTCTAGCTCGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACCCACTGGCGCCACggct < 1:2561262/96‑3 (MQ=255) aCGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAg > 2:220000/1‑100 (MQ=255) aCGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAg > 1:3967864/1‑100 (MQ=255) aCGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAg < 2:4152969/100‑1 (MQ=255) cGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGc > 1:3336250/1‑100 (MQ=255) cGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGAAGACGTGCAACGCACTGGCGGCACGGGTGAAGc > 1:1002520/1‑100 (MQ=255) ggTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCt > 1:4182405/1‑100 (MQ=255) ggTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCt > 2:2591526/1‑100 (MQ=255) ggTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCt > 2:2803094/1‑100 (MQ=255) cAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGcc > 2:341918/1‑100 (MQ=255) cAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGcc < 2:4083502/100‑1 (MQ=255) aaaCAGCGACACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCa < 1:69640/100‑1 (MQ=255) aaCAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCAt > 2:3950044/1‑100 (MQ=255) gCGGCACGCCTAAACTCTCCTCTAACTGGCGCATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTc < 2:2688901/100‑1 (MQ=255) cGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCa > 2:3549333/1‑100 (MQ=255) gCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGc < 1:460222/100‑1 (MQ=255) cACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGcc > 2:382121/1‑100 (MQ=255) cGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCAc > 2:3030398/1‑100 (MQ=255) cGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCAc < 1:3030386/100‑1 (MQ=255) cGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCAc < 2:3040020/100‑1 (MQ=255) gCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACg > 2:1447201/1‑100 (MQ=255) gCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACg < 2:1521471/100‑1 (MQ=255) ccTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACgg < 2:2538518/100‑1 (MQ=255) cTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGc < 1:3329359/100‑1 (MQ=255) cTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGc < 2:1523587/100‑1 (MQ=255) tAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCa > 1:339432/1‑100 (MQ=255) tAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCa > 1:1097326/1‑100 (MQ=255) aCTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGa < 2:2643732/100‑1 (MQ=255) aCTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGa < 1:1926052/100‑1 (MQ=255) tctcCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaa < 2:854229/100‑1 (MQ=255) ctcctcTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa > 2:583903/1‑100 (MQ=255) ctcctcTAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGaaaa < 1:1226037/100‑1 (MQ=255) cctcTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaata > 2:1972409/1‑100 (MQ=255) ctctAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaataa < 2:1364721/100‑1 (MQ=255) ctctAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaataa > 1:3976726/1‑100 (MQ=255) ctctAACTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaataa > 2:2661377/1‑100 (MQ=255) tctAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaataat < 2:1133444/100‑1 (MQ=255) tctAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAaataat < 2:2851022/100‑1 (MQ=255) tAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTg < 1:2575267/100‑1 (MQ=255) cttgctaaTCTTTTGGGAAAGCACCGGTTTGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata < 2:3225136/94‑1 (MQ=255) cTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata > 2:3867838/1‑100 (MQ=255) cTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata < 1:1940237/100‑1 (MQ=255) cTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata < 1:1806689/100‑1 (MQ=255) cTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata > 2:2007175/1‑100 (MQ=255) cTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGata > 1:1386859/1‑100 (MQ=255) cTGGCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTACCATGTTCAGCCACGGCAAGAAAATAATTGata < 2:259842/100‑1 (MQ=255) tGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGat < 1:1586364/98‑1 (MQ=255) ggCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATg < 2:3462405/100‑1 (MQ=255) ggCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATg > 2:159037/1‑100 (MQ=255) ggCGAATCTGCTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATg > 2:3179209/1‑100 (MQ=255) cGAATCTGTTGGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTc > 1:3817412/1‑100 (MQ=255) gAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCg < 2:2711548/100‑1 (MQ=255) tgctgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCgagaga > 2:3658808/1‑100 (MQ=255) tgctgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCgagaga > 1:3893618/1‑100 (MQ=255) tgctgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCgagaga > 2:4115014/1‑100 (MQ=255) gctgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGagagag > 1:1851049/1‑100 (MQ=255) ctgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGc > 2:3081391/1‑100 (MQ=255) ctgGGAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGc > 1:1169305/1‑100 (MQ=255) tgGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCa < 2:3366212/100‑1 (MQ=255) gggAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCAt > 1:1305157/1‑100 (MQ=255) ggAAAGCACAGGGTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCAtt > 1:3144575/1‑100 (MQ=255) gAAAGCACAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTc > 2:2078315/1‑100 (MQ=255) aaaGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCg < 1:3198931/100‑1 (MQ=255) gcAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAAcc < 2:3629336/100‑1 (MQ=255) gcAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAAcc < 2:3418482/100‑1 (MQ=255) | AGACTTCTCCTGCATCAGTGAGACGAATCGTTCGCCCGCTACGGTCAAACAGCGGCACGCCTAAACTCTCCTCTAACTGGCGAATCTGCTGGGAAAGCGCAGGTTGGGAGACGTGCAACGCACTGGCGGCACGGGTGAAGCTGCCATGTTCAGCCACGGCAAGAAAATAATTGATATGTCGAGAGAGCATTCGCAACC > NC_000913/358501‑358698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |