BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	2,600,288	C→T	100%	S128L (TCG→TTG)	gcvR →	transcriptional repressor, regulatory protein accessory to GcvA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,600,288	0	C	T	100.0%	626.1 / ‑6.7	182	S128L (TCG→TTG)	gcvR	transcriptional repressor, regulatory protein accessory to GcvA
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (83/98); minor base G (0/1); total (83/99)

Only 100 of 187 total aligned reads displayed.

GTCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGC  >  NC_000913/2600191‑2600383

 tctgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTtgcg                                                                                              <  1:945196/100‑1 (MQ=255)

 tctgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTtgcg                                                                                              <  1:2268930/100‑1 (MQ=255)

 tctgGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTtgcg                                                                                              <  1:1168159/100‑1 (MQ=255)

    gggTTCAGGTCGATGCGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgcac                                                                                           >  1:3200768/1‑100 (MQ=255)

     ggTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgcacg                                                                                          <  1:4251177/100‑1 (MQ=255)

     ggTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgcacg                                                                                          <  2:2100657/100‑1 (MQ=255)

     ggTTCAGCTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgca                                                                                            <  1:2303523/98‑1 (MQ=255)

      gTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTtgcgtgcgc                                                                                         <  2:1845121/100‑6 (MQ=255)

       ttCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGcgcacgca                                                                                        <  2:1273713/100‑1 (MQ=255)

           ggTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACct                                                                                    >  2:496551/1‑100 (MQ=255)

           ggTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACct                                                                                    >  1:4276751/1‑100 (MQ=255)

            gTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTTCGCACGCAACctg                                                                                   <  2:2901444/100‑1 (MQ=255)

                aTGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGa                                                                               >  1:1184822/1‑100 (MQ=255)

                  gtgGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGTGCGCAAcaccagctcc                                                                             <  2:3274859/100‑10 (MQ=255)

                  gtgGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGaaa                                                                             >  1:2379281/1‑100 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           >  2:2456638/1‑100 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           <  2:1566678/100‑1 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           >  2:2016711/1‑100 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           >  1:1131187/1‑100 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           <  1:2768962/100‑1 (MQ=255)

                    ggCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           >  1:2407209/1‑100 (MQ=255)

                     gCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTTCGCACGCAACCTGCTGAAAATg                                                                          <  2:3170373/100‑1 (MQ=255)

                     gCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAAt                                                                           >  1:741199/1‑99 (MQ=255)

                     gCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATg                                                                          >  2:1781827/1‑100 (MQ=255)

                     gCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATg                                                                          <  2:2180781/100‑1 (MQ=255)

                      cAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTACTGAAAATGa                                                                         >  1:2817465/1‑100 (MQ=255)

                         aCTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACg                                                                      >  2:3813243/1‑100 (MQ=255)

                         aCTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACg                                                                      <  2:1421124/100‑1 (MQ=255)

                          cTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACgg                                                                     <  1:1850737/100‑1 (MQ=255)

                            ccccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGc                                                                   <  1:1041879/100‑1 (MQ=255)

                             cccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCt                                                                  >  2:2052127/1‑100 (MQ=255)

                             cccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCt                                                                  >  2:2408690/1‑100 (MQ=255)

                              ccGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTg                                                                 <  1:1286293/100‑1 (MQ=255)

                               cGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgc                                                                >  1:3682742/1‑100 (MQ=255)

                               cGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgc                                                                <  1:495493/100‑1 (MQ=255)

                                gCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGGTgcg                                                               <  1:1116343/100‑1 (MQ=255)

                                 cATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgcgc                                                              <  2:4128765/100‑1 (MQ=255)

                                 cATTTAAGTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTgcgc                                                              >  2:2250457/1‑100 (MQ=255)

                                  aTTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCa                                                             >  1:2613440/1‑100 (MQ=255)

                                  aTTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCa                                                             >  1:4019512/1‑100 (MQ=255)

                                   tttAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAg                                                            >  2:2115086/1‑100 (MQ=255)

                                    ttAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGt                                                           <  2:3604706/100‑1 (MQ=255)

                                     tAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTCCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGtt                                                          >  2:3096678/1‑100 (MQ=255)

                                      aaTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTg                                                         <  2:1865157/100‑1 (MQ=255)

                                      aaTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTg                                                         <  2:4226985/100‑1 (MQ=255)

                                      aaTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTg                                                         <  2:116355/100‑1 (MQ=255)

                                       aTTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGTTGAAAATGAACGGGCTGCGCAGTTGc                                                        <  2:2599735/100‑1 (MQ=255)

                                        ttGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCa                                                       <  1:1377516/100‑1 (MQ=255)

                                         tGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCat                                                      <  1:825260/100‑1 (MQ=255)

                                          gAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACACTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCata                                                     >  2:1092337/1‑100 (MQ=255)

                                             cGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTc                                                  >  1:1001874/1‑100 (MQ=255)

                                              gCTTCACAGGACTGGGCGAGACGCAGCATATTGACGTTGGGGAGCGGGTGTGGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCa                                                 <  1:3328025/100‑1 (MQ=255)

                                              gCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCa                                                 <  2:1437603/100‑1 (MQ=255)

                                                  cacaGCACTTTTCGACGCGCATCATATGACCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGCGCTGCGCAGTTGCATATACAGATa                                             >  2:1139966/1‑100 (MQ=255)

                                                    caGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAAc                                           <  2:1909889/100‑1 (MQ=255)

                                                       cACTTTTCGACGCGCATCATATGAACATTGTGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCg                                         <  1:3450632/99‑1 (MQ=255)

                                                        aCTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGcc                                       <  1:2015829/100‑1 (MQ=255)

                                                        aCTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGcc                                       <  2:4248253/100‑1 (MQ=255)

                                                          ttttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCca                                     <  1:910376/100‑1 (MQ=255)

                                                           tttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGcc                                       >  1:1587976/1‑97 (MQ=255)

                                                           tttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCcac                                    <  2:3406610/100‑1 (MQ=255)

                                                           tttCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCcac                                    <  2:2678710/100‑1 (MQ=255)

                                                             tCGACGGGCATCATATGAACATTGCGGCGCTGGTGTTGCGCCGGCAAGCTGGTGGAGATGGACGGCGTGGGAAACTGGATATTCAGATaaagacaaac                                    >  1:3511907/1‑90 (MQ=255)

                                                             tCGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAg                                  <  1:3715440/100‑1 (MQ=255)

                                                              ngACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGc                                 >  2:3973589/2‑100 (MQ=255)

                                                              cGACGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGc                                 >  2:3558840/1‑100 (MQ=255)

                                                                aCGCGCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGccc                               >  2:803556/1‑100 (MQ=255)

                                                                 cgcgCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGcccc                              >  1:4079231/1‑100 (MQ=255)

                                                                 cgcgCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGcccc                              >  2:374756/1‑100 (MQ=255)

                                                                 cgcgCATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGcccc                              >  2:1370210/1‑100 (MQ=255)

                                                                  gcgcATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCg                             <  2:2243280/100‑1 (MQ=255)

                                                                   cgcATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGGTGCATATTCAGATAACCGCCCACAGCCCCGc                            >  1:613702/1‑100 (MQ=255)

                                                                    gcATCATATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCa                           <  1:3256612/100‑1 (MQ=255)

                                                                     catcatATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCAt                          <  1:248958/100‑1 (MQ=255)

                                                                     catcatATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCAt                          <  1:247928/100‑1 (MQ=255)

                                                                       tcatATGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCt                        >  2:477320/1‑100 (MQ=255)

                                                                         atatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGc                      >  2:4177551/1‑100 (MQ=255)

                                                                          tatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCg                     >  2:2759409/1‑100 (MQ=255)

                                                                          tatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCg                     >  1:4198112/1‑100 (MQ=255)

                                                                          tatGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCg                     >  1:4173066/1‑100 (MQ=255)

                                                                           atGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCgg                    >  2:3948706/1‑100 (MQ=255)

                                                                            tGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGa                   <  2:1001877/100‑1 (MQ=255)

                                                                            tGAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGa                   >  2:1351150/1‑100 (MQ=255)

                                                                             naaCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGAc                  >  2:1932601/2‑100 (MQ=255)

                                                                             gAACATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGAc                  <  2:1269610/100‑1 (MQ=255)

                                                                              aaCATTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACg                 >  2:3677569/1‑100 (MQ=255)

                                                                                 aTTGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACgcag              <  2:1549679/100‑1 (MQ=255)

                                                                                  ttGCGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACgcagc             >  2:2514819/1‑100 (MQ=255)

                                                                                     cGGAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaaa          >  1:3957579/1‑100 (MQ=255)

                                                                                      ggAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCaaa          <  1:349633/99‑1 (MQ=255)

                                                                                       gAGCTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAat         >  1:1336799/1‑99 (MQ=255)

                                                                                        aGCTGGTGATGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGCTACCCACCCACCGCCCCGCATCGACGGACGCAGCAActa        >  1:811307/1‑99 (MQ=255)

                                                                                          cTGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTg     <  1:225785/100‑1 (MQ=255)

                                                                                          cTGGTGTTGCGCACGCAACCTGCTGAAAATGAACCGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTg     <  1:323454/100‑1 (MQ=255)

                                                                                           tGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa    <  2:2324659/100‑1 (MQ=255)

                                                                                           tGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa    >  1:3753959/1‑100 (MQ=255)

                                                                                           tGGTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGa    <  2:741332/100‑1 (MQ=255)

                                                                                           tGGTGTTGCGAACGCAACTTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTg     <  2:933262/99‑1 (MQ=255)

                                                                                            ggTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAg   >  1:2703298/1‑100 (MQ=255)

                                                                                            ggTGTTGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAg   <  2:3330065/100‑1 (MQ=255)

GTCTGGGTTCAGGTCGATGTGGCAGACTCCCCGCATTTAATTGAACGCTTCACAGCACTTTTCGACGCGCATCATATGAACATTGCGGAGCTGGTGTCGCGCACGCAACCTGCTGAAAATGAACGGGCTGCGCAGTTGCATATTCAGATAACCGCCCACAGCCCCGCATCTGCGGACGCAGCAAATATTGAGC  >  NC_000913/2600191‑2600383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`