| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,671,759 | C→A | 35.7% | R179R (CGG→AGG) | hcaB → | 2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,671,759 | 0 | C | A | 35.7% | 220.9 / 190.5 | 189 | R179R (CGG→AGG) | hcaB | 2,3‑dihydroxy‑2,3‑dihydrophenylpropionate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (72/49); new base A (36/32); total (108/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 192 total aligned reads displayed.
GCCTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG > NC_000913/2671660‑2671858 | ccTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCg > 2:2018722/1‑100 (MQ=255) cTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCgg > 2:1560972/1‑100 (MQ=255) tGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAggg < 2:2947073/100‑1 (MQ=255) ggTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTCTTCGCCAACTGGCCTATGAACTGGCACCGAAAGTGCGGGt > 1:3077131/1‑100 (MQ=255) ccTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATg < 1:4229463/100‑1 (MQ=255) ccTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATg > 2:3088986/1‑100 (MQ=255) cTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATgg < 2:3048332/100‑1 (MQ=255) cTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATgg > 2:2121345/1‑100 (MQ=255) cggcggTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTc > 2:4131374/1‑100 (MQ=255) cggTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGc < 1:1037197/100‑1 (MQ=255) ggTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGcc > 2:439069/1‑100 (MQ=255) gatctcccGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGcc < 1:1979126/95‑1 (MQ=255) gTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGccc > 1:1413208/1‑100 (MQ=255) gTGGCCCGCTGTACACCGCCAGAAAACATGCCGCAACCGGACTTATTCGCCAACCGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGccc < 2:3916056/100‑1 (MQ=255) gCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGt > 2:2755462/1‑100 (MQ=255) gCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGt < 2:2933596/100‑1 (MQ=255) gCTGTACACCGCCAGTAAACATGCCGCAACCGGACTGATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGt < 2:2028445/100‑1 (MQ=255) cTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTa < 2:849015/100‑1 (MQ=255) tGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTAt > 2:3516801/1‑100 (MQ=255) tACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATgg > 1:1524997/1‑100 (MQ=255) tACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATgg < 1:2900829/100‑1 (MQ=255) tACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATgg < 2:3970804/100‑1 (MQ=255) tACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATgg > 2:3162068/1‑100 (MQ=255) acacCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGc < 2:253387/100‑1 (MQ=255) cacCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGcc > 1:2526700/1‑100 (MQ=255) acCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCa > 2:2050662/1‑100 (MQ=255) acCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCCTACGAACTGCCACCGAACGTGCGCGTGACCGGCGTCGGCCCGTGGCGTATGGc > 1:1016807/1‑98 (MQ=255) ccGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAg > 2:3728609/1‑100 (MQ=255) ccGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAg > 1:3822597/1‑100 (MQ=255) cGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAg < 1:3937729/99‑1 (MQ=255) cGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGc < 2:3200617/100‑1 (MQ=255) cGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGc < 1:1827860/100‑1 (MQ=255) gCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCg > 1:141721/1‑100 (MQ=255) cAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATCGCGACGGCCCGAGTGGTCTGGCCAGCGAc > 1:3452807/1‑100 (MQ=255) aGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGAcc > 2:1439979/1‑100 (MQ=255) gTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCt > 1:3774012/1‑100 (MQ=255) tAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTg < 2:3584061/100‑1 (MQ=255) tAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTg > 1:3915791/1‑100 (MQ=255) aaaCATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTgc > 1:2090888/1‑100 (MQ=255) cATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGcgcg > 2:3218716/1‑100 (MQ=255) aggCCGCAACCGGACTGATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCgg < 2:636583/98‑1 (MQ=255) ccGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGccc < 2:1924814/100‑1 (MQ=255) ccGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGccc < 2:1513646/100‑1 (MQ=255) gCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCcac > 2:2632979/1‑100 (MQ=255) cAACGGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCcaca < 1:2512435/100‑1 (MQ=255) aCCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTACGCgg > 1:499446/1‑92 (MQ=255) cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGTGACCTGCGCGGCCCACAGGCGCTCg > 2:3886851/1‑100 (MQ=255) cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg > 2:1249319/1‑100 (MQ=255) cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg < 1:923600/100‑1 (MQ=255) cTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCg > 2:3773344/1‑100 (MQ=255) ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg < 1:3925698/100‑1 (MQ=255) ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg < 2:377890/100‑1 (MQ=255) ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg < 1:1088666/100‑1 (MQ=255) ttATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCgg > 2:197634/1‑100 (MQ=255) tATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCggg > 2:132711/1‑100 (MQ=255) tATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCggg > 1:2575316/1‑100 (MQ=255) tATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCggg > 2:1814356/1‑100 (MQ=255) aTTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc > 1:2702396/1‑100 (MQ=255) aTTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc > 1:3976133/1‑100 (MQ=255) aTTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGc < 1:3240131/100‑1 (MQ=255) tCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCaa > 1:3035609/1‑100 (MQ=255) ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGt > 1:4165932/1‑100 (MQ=255) ccAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGt < 2:688107/100‑1 (MQ=255) cAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTg < 1:2122738/100‑1 (MQ=255) aaCTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGa > 1:1617024/1‑100 (MQ=255) cTGGCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAACGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGaaa > 1:1221070/1‑100 (MQ=255) ggCTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAAcc > 2:2191628/1‑100 (MQ=255) cTTATGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTc > 2:801176/1‑100 (MQ=255) ttATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCg > 1:2369633/1‑100 (MQ=255) aTGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGAt < 2:10556/100‑1 (MQ=255) aTGAACTGGCACCGAAAGTGAGGGTGAATGGCGTCCGCCCGTGTTGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGAt < 1:984279/100‑1 (MQ=255) gAACTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATaa < 1:1062761/100‑1 (MQ=255) aCTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTAGGGCAAAGAGAAACCTAGATAATg > 2:3564602/1‑100 (MQ=255) cTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc < 1:1397263/100‑1 (MQ=255) cTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc < 2:577667/100‑1 (MQ=255) cTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc < 1:3807259/100‑1 (MQ=255) cTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc < 2:3774029/100‑1 (MQ=255) cTGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGc > 2:3466989/1‑100 (MQ=255) tGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCAATAATGCa > 1:3625427/1‑100 (MQ=255) tGGCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCa > 2:1040979/1‑100 (MQ=255) ggCACCGAGAGTGAGGTGGAATGGCGTCGGCCCGGGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg < 1:171856/100‑1 (MQ=255) ggCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg < 2:3428703/100‑1 (MQ=255) ggCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg > 1:4102460/1‑100 (MQ=255) ggCACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAg < 2:667005/100‑1 (MQ=255) cACCGAAAGTGCGTGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCAGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtc > 1:3310668/1‑100 (MQ=255) cACCGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtc > 1:2161158/1‑100 (MQ=255) aCCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtct > 2:77811/1‑100 (MQ=255) ccGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtctc < 2:1525001/100‑1 (MQ=255) ccGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGtctc < 2:1366999/100‑1 (MQ=255) cGAAAGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTctct > 2:1210566/1‑100 (MQ=255) gAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATCATGCAGTCTCTg > 1:1876328/1‑100 (MQ=255) gAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCCGGACAAGTGAAACCTCGATAATGCAGTCTCTg > 1:1109937/1‑100 (MQ=255) gAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCAGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTg > 2:3364610/1‑100 (MQ=255) aaGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGTCAGCGACCCGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc < 2:4069233/100‑1 (MQ=255) aaGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc > 1:602658/1‑100 (MQ=255) aaGTGAGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGAc < 2:3168255/100‑1 (MQ=255) gTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGTGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGc > 1:3487444/1‑100 (MQ=255) gCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGcc < 1:822735/99‑1 (MQ=255) gCGGGTGAATGGCGTCGCCCCGTGTGGAATGGCCAGCGACCTGCTCGGCACACAGGCGCTCGGGCAAAGTGAATCCTCGATAATGCAGtc < 1:2409207/90‑1 (MQ=255) cGGGTGAATGGCGTCGGCCCGTGTGGTATGGACAGCGACCTGCGCGGCCCACCGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCgg > 1:377417/1‑100 (MQ=255) | GCCTGGTATCCTGGCGGCGGTGGCCCGCTGTACACCGCCAGTAAACATGCCGCAACCGGACTTATTCGCCAACTGGCTTATGAACTGGCACCGAAAGTGCGGGTGAATGGCGTCGGCCCGTGTGGTATGGCCAGCGACCTGCGCGGCCCACAGGCGCTCGGGCAAAGTGAAACCTCGATAATGCAGTCTCTGACGCCGG > NC_000913/2671660‑2671858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |