| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,682,158 | T→C | 42.7% | K196K (AAA→AAG) | yphG ← | DUF4380 domain‑containing TPR repeat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,682,158 | 0 | T | C | 42.7% | 58.2 / 190.1 | 161 | K196K (AAA→AAG) | yphG | DUF4380 domain‑containing TPR repeat protein |
| Reads supporting (aligned to +/- strand): ref base T (59/32); new base C (32/36); total (91/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.49e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.66e-01 | |||||||||||
Only 100 of 169 total aligned reads displayed.
AGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGC > NC_000913/2682059‑2682254 | aGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCt > 2:2781694/1‑100 (MQ=255)aGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCt > 2:47742/1‑100 (MQ=255) gTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCtt < 2:598152/100‑1 (MQ=255) gCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTc < 2:2931647/100‑1 (MQ=255) ccGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCa > 1:1422213/1‑100 (MQ=255) ggTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGGTCAAACACCGCCGTTACATCCGGCGGGAAGACGCGCTGATGCCCTTCCCCCCGTTTCAc > 1:1907439/1‑99 (MQ=255) gCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCg < 2:2437568/100‑1 (MQ=255) cGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACTGAAGTTACATCAGGCGGGAAGACGACATGATGCCCTTCTCCCCCTTTCCCTGCCgg > 1:1858167/1‑100 (MQ=255) cGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCgg > 1:619605/1‑100 (MQ=255) cGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCgg > 2:901271/1‑100 (MQ=255) cGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCgg < 1:2528234/100‑1 (MQ=255) gATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCggg < 1:1290529/100‑1 (MQ=255) gggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTgg > 1:1331582/1‑100 (MQ=255) gggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTgg < 1:3954009/100‑1 (MQ=255) gcgAAAACGGAGACGGCCCATTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGAAGCTCTGAGGCCCTTCCCCCCCCGTCCGTGCCGGGGTgt > 1:352017/3‑99 (MQ=255) ggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGc < 2:98802/100‑1 (MQ=255) ggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGc < 1:4099857/100‑1 (MQ=255) ggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTgac < 2:2415774/100‑3 (MQ=255) ggAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGc > 1:3461611/1‑100 (MQ=255) gAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCCCCGCCGGGTTGGcc > 1:735293/1‑100 (MQ=255) gAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGcc < 1:744291/100‑1 (MQ=255) gAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGcc < 1:652917/100‑1 (MQ=255) agaGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGccc < 1:501123/98‑1 (MQ=255) aaaGCGGAGACGGCCCGTGTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGc < 1:1155881/98‑1 (MQ=255) aaGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCcca < 2:436410/100‑1 (MQ=255) aaGCGGAGACGGCCCGATTGCCGTGATCAAACACCGCCGTTACATCCTGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGcc < 1:4041193/98‑1 (MQ=255) aGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCccac < 1:283991/100‑1 (MQ=255) gCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCccacc < 2:3475369/100‑1 (MQ=255) gCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCccacc > 1:2355224/1‑100 (MQ=255) cGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCccacca > 2:688622/1‑100 (MQ=255) cGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCccac > 1:1590364/1‑98 (MQ=255) gagaCGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACcaca > 1:1195671/1‑100 (MQ=255) agaCGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACaa > 2:4093748/1‑100 (MQ=255) gaCGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAg < 1:884868/100‑1 (MQ=255) aCGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGa < 2:3035059/100‑1 (MQ=255) ggCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGaaa < 2:2347244/100‑1 (MQ=255) ggCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGaaa < 2:1164259/100‑1 (MQ=255) ggCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGaaa < 1:2508540/100‑1 (MQ=255) gCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAAt < 1:3287588/100‑1 (MQ=255) gTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGAcg < 2:3925252/100‑1 (MQ=255) gTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGAcg > 2:3679811/1‑100 (MQ=255) tttGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGAcgc < 1:311060/100‑1 (MQ=255) tGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACgcgg < 1:4141005/100‑1 (MQ=255) gCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACgcggc > 2:217743/1‑100 (MQ=255) gCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACgcggc > 2:123502/1‑100 (MQ=255) gCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTACACTGCCGGGTTGGCCCACCACAAGAAATGACgcggc > 1:2884607/1‑100 (MQ=255) ccGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACgcggcg > 2:3979613/1‑100 (MQ=255) tGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCggcgtgg < 2:3508775/100‑1 (MQ=255) gATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCggcgtgg > 1:673278/1‑99 (MQ=255) gATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCggcgtggc < 2:3141334/100‑1 (MQ=255) aTCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCggcgtggcg > 2:1985259/1‑100 (MQ=255) cAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCggcgtggcgt > 1:1675315/1‑99 (MQ=255) aaaCACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTc > 2:3901155/1‑100 (MQ=255) aaCACCGCCGTCACATCCGGCGGGAGGACGCTCTGATGCCCTGCCCCCCCCCTCGCTGACGGGTTGGCCCACCACAAGAAATGACGAGCCGTGGCGTTcc < 1:2063685/100‑1 (MQ=255) acacCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTccc < 1:3588756/100‑1 (MQ=255) cacCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCg > 2:1457090/1‑100 (MQ=255) cacCGCCGTTACATCCGGCAGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGGGTTccc > 1:3386544/1‑99 (MQ=255) acCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCg < 2:4014610/99‑1 (MQ=255) ccgccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGtt < 2:1806591/100‑1 (MQ=255) gccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTtat < 1:2746734/100‑1 (MQ=255) gccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTtat > 1:976247/1‑100 (MQ=255) gccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTGCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGATGCGGCGTGGCGTTCCCGTtat < 1:3689285/100‑1 (MQ=255) ccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTtata < 1:2663727/100‑1 (MQ=255) ccgTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGAGTTCCCGTtata > 2:624285/1‑100 (MQ=255) tACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAcg > 2:1929304/1‑100 (MQ=255) tACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAcg > 1:2034309/1‑100 (MQ=255) cATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAcgcg > 2:3382615/1‑100 (MQ=255) cATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGAcgcg > 2:3678404/1‑100 (MQ=255) tCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGc > 2:422442/1‑100 (MQ=255) cggcggGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTg > 2:3251087/1‑100 (MQ=255) ggcggGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTgg > 2:1323458/1‑100 (MQ=255) gcggGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGc > 2:260487/1‑100 (MQ=255) gcggGAAGACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGc < 1:2028581/100‑1 (MQ=255) ggAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGAt > 2:4142097/1‑100 (MQ=255) ggAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCAGCTTGGCGTTCCCGTTATAGACGCGGCTGGCGag > 2:2040667/1‑99 (MQ=255) gACGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTcc > 2:3830386/1‑100 (MQ=255) cGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAg > 2:1592793/1‑100 (MQ=255) cGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAg > 2:469902/1‑100 (MQ=255) cGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAg > 1:1233116/1‑100 (MQ=255) cGCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAg < 1:3792148/100‑1 (MQ=255) gCTCTGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAgc < 2:1394677/100‑1 (MQ=255) ctctGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAgcg < 2:3180878/100‑1 (MQ=255) ctctGATGCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAgcg < 2:3613079/100‑1 (MQ=255) tctGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAgcgc > 1:4216783/1‑100 (MQ=255) tctGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAgcgc > 1:4217490/1‑100 (MQ=255) ngATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGcgccg > 1:4161256/2‑100 (MQ=255) gATGCCCTTCCCCCCC‑TTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCgccgcc < 1:2686258/100‑1 (MQ=255) tGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGccc < 2:301046/100‑1 (MQ=255) tGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGccc > 1:307659/1‑100 (MQ=255) tGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGccc > 2:1237076/1‑100 (MQ=255) gCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCg > 2:2259551/1‑100 (MQ=255) gCCCTTCCCCCCCCTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCg > 1:1009640/1‑100 (MQ=255) ccTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGt < 2:4095001/100‑1 (MQ=255) cccccccccTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTc < 2:27036/97‑1 (MQ=255) ccccccTTTCACTGCCGTGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGGTCCCGTAATATACGCGGGGTGCGATTTTCAGCGCCGCTCGTTTAggg > 1:3621955/1‑100 (MQ=255) ccccccTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAggg > 2:519465/1‑100 (MQ=255) ccccccTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGgc < 2:3270574/100‑1 (MQ=255) cccccTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGgc < 1:792647/100‑1 (MQ=255) cccccTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTGCCCGTGATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAggg < 1:1031785/99‑1 (MQ=255) ccaccTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACACGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGAATTCCAGCGTCGCCTGATCAgg > 1:936523/4‑98 (MQ=255) | AGTGCCGGTAGCGATGGGGAAAGCGGAGACGGCCCGTTTGCCGTGATCAAACACCGCCGTTACATCCGGCGGGAAGACGCTCTGATGCCCTTCCCCCCCTTTCACTGCCGGGTTGGCCCACCACAAGAAATGACGCGGCGTGGCGTTCCCGTTATAGACGCGGCTGGCGATTTCCAGCGCCGCCCGGTCAGGGCGC > NC_000913/2682059‑2682254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |