| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,195,102 | G→A | 40.4% | intergenic (+277/‑39) | ibsD → / → ibsE | toxic membrane protein/toxic membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,195,102 | 0 | G | A | 40.4% | 105.7 / 172.4 | 164 | intergenic (+277/‑39) | ibsD/ibsE | toxic membrane protein/toxic membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (42/54); new base A (33/32); total (75/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.48e-01 | |||||||||||
Only 100 of 171 total aligned reads displayed.
GTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTAAC > NC_000913/3195003‑3195201 | gTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAg < 1:823213/100‑1 (MQ=255)gTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAg > 1:2774940/1‑100 (MQ=255)gTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAg < 1:2705587/100‑1 (MQ=255) gACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGcc < 2:2074754/100‑1 (MQ=255) gACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAAcc < 2:2653186/100‑1 (MQ=255) gCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTc > 1:907304/1‑100 (MQ=255) cGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTcc < 2:1389722/98‑1 (MQ=255) cccagaGGCAATTTTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCga > 2:3105461/6‑100 (MQ=21) ggAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCgaag < 2:3885185/100‑1 (MQ=255) gAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCgaaga > 2:3586365/1‑100 (MQ=255) aaGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCgaagaa < 1:319235/100‑1 (MQ=255) aaGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCgaagaa < 1:437509/100‑1 (MQ=255) ggCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAgg < 2:2760521/100‑1 (MQ=255) tcAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAggg < 2:1209743/99‑1 (MQ=255) tcAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAggg < 2:823513/99‑1 (MQ=255) cAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAgggg < 2:4017862/100‑1 (MQ=255) aaaaTTGCCTCTGGGAAAGCATTGCGCTGGGTCCGGCGCTCGTCAAGACTCGTGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGc > 1:407998/1‑100 (MQ=21) aaaCTGCCTCTGGGAAAGCATTGCGCGGGGTCTGACGCTCATCAACAATCGGGAAGTCAGCAAAGGGCTGAAACGGGAAAGCCCCTCCCGAGGAAGGGGc < 1:3715152/100‑1 (MQ=11) ttGCCTCTGGGAAAGCATTGCGGGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTg < 2:2430775/100‑1 (MQ=255) ccTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGtat > 1:279998/1‑100 (MQ=255) ccTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGtat < 2:516675/100‑1 (MQ=255) ccTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGtat > 2:637773/1‑100 (MQ=255) gtctAGGAAAGCATTGCGCGGGGTCCGGCGCACATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAACCCCCTCCCGAAGAAGGGGCCTTGt < 1:1128595/96‑1 (MQ=255) nctGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAGACGGGAACGCCCCCCCCGAAGAAGGGGCCCTGtat > 1:548344/2‑98 (MQ=18) ctGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAg < 1:3047197/100‑1 (MQ=255) gggAATACATTGGGCGGGGGCCGGCGCTCATCAACTATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATaan < 2:1981714/98‑2 (MQ=18) gAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGaaa < 1:3317476/100‑1 (MQ=255) gAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGAAAAACGCCTCCCGAAGAAGGGGCCTTGTATAAGGaa > 1:2878646/1‑99 (MQ=255) aaggattggcggGGGGCCGGGCGCTCACCAAAAACGGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAg < 1:2245695/92‑1 (MQ=18) gCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGt < 1:297775/100‑1 (MQ=255) gCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAggg > 2:1461137/1‑99 (MQ=255) gCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGt > 2:1023997/1‑100 (MQ=255) cATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGtt > 2:3453893/1‑100 (MQ=255) cATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGtt > 2:2675189/1‑100 (MQ=255) aTTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTa > 2:3424497/1‑100 (MQ=255) tGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTatg < 2:1589803/100‑1 (MQ=255) gcgcGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTatga < 1:1386665/100‑1 (MQ=255) gcgcGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTatga < 1:2445205/100‑1 (MQ=255) gcgGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTatgatg > 1:1493853/1‑100 (MQ=255) ggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGc < 2:283333/100‑1 (MQ=255) ggTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGc > 1:1988930/1‑100 (MQ=255) gTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCt > 1:3453635/1‑100 (MQ=255) ccGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCGGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCg > 1:2738543/1‑100 (MQ=255) ccGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCg < 2:672467/100‑1 (MQ=255) ccGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGGATAAGGAAAGGGTTATGATGAAGCTCg > 1:718883/1‑100 (MQ=255) ggCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACTGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtc > 1:1302939/1‑100 (MQ=255) cgcTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcat < 1:106837/100‑1 (MQ=255) cgcTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcat > 1:3767302/1‑100 (MQ=255) gcTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGtcatc > 2:2421130/1‑100 (MQ=255) tcatcaACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTcatcat < 1:401053/100‑1 (MQ=255) catcaACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATa > 2:3449662/1‑100 (MQ=255) catcaACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATa > 2:3510170/1‑100 (MQ=255) catcaACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATa > 2:1031214/1‑100 (MQ=255) caacaaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTg > 2:4189265/1‑100 (MQ=255) caacaaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTg > 1:262928/1‑100 (MQ=255) aacaaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGACGAGCTTCATCATaaccc < 1:1055980/100‑5 (MQ=18) acaaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGTGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgt < 1:1472635/100‑1 (MQ=255) acaaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTgg < 2:1047565/99‑1 (MQ=255) caaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgtt > 1:1773861/1‑100 (MQ=255) caaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgtt > 2:734894/1‑100 (MQ=255) aaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttg < 2:544740/100‑1 (MQ=255) aaTCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttg < 2:3372305/100‑1 (MQ=255) tCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtg < 2:3065186/100‑1 (MQ=255) cGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtgt < 1:2205188/100‑1 (MQ=255) gggg‑ggCAGCAAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtgtt < 2:3550608/100‑1 (MQ=255) gggg‑agAAGCAAGGGGTTGAAACGGGAATACTTGTCGCGAAGAAGGGGCTTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtg < 1:4237961/98‑1 (MQ=17) ggg‑ggCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtgttg < 1:2195891/100‑1 (MQ=255) gg‑ggCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGgttgtgttgt < 1:848296/100‑1 (MQ=255) ggCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTa > 1:1790251/1‑100 (MQ=255) gcagcaAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTAc < 2:2234091/100‑1 (MQ=255) gcagcaAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTAc < 2:3157618/100‑1 (MQ=255) cagcaAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACt < 1:1930782/100‑1 (MQ=255) cagcaAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACt < 1:286638/100‑1 (MQ=255) cagcaAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACt > 2:2161130/1‑100 (MQ=255) cagcaAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACt < 1:2043864/100‑1 (MQ=255) cagcaAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACt > 1:801747/1‑100 (MQ=255) cagcaAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCAGACTGGTTGTGTTGTTAc > 2:3923419/1‑99 (MQ=255) agcaAGGGGCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTg < 1:489295/100‑1 (MQ=255) caAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGtt < 2:2167373/100‑1 (MQ=255) aaGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTa < 1:2418709/100‑1 (MQ=255) ggggCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTacg > 2:2486958/1‑98 (MQ=255) ggggCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAg < 2:3191692/100‑1 (MQ=255) ggCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGtt > 2:1684925/1‑100 (MQ=255) gCTGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGttt > 1:4041085/1‑100 (MQ=255) cTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGttt > 2:3306574/1‑99 (MQ=255) tGAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTAATGTTAAGTTTcc > 1:71163/1‑100 (MQ=255) gAAACGGGAAAACCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTccc < 2:1318470/100‑1 (MQ=255) aaaCGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCg < 2:3795091/100‑1 (MQ=255) aaaCGGGAAACCCCTCCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCg < 1:2183311/100‑1 (MQ=255) aaCGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGa > 1:3032692/1‑100 (MQ=255) cGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACt > 2:136105/1‑100 (MQ=255) cGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACt < 1:3581693/100‑1 (MQ=255) gggAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACtt < 2:642528/100‑1 (MQ=255) ggAAATCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTa < 2:1908645/100‑1 (MQ=255) gAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGAc < 1:1526121/96‑1 (MQ=255) gAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTAc > 1:4077207/1‑100 (MQ=255) aaaaCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACt < 2:1770563/100‑1 (MQ=255) aaGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTa < 1:3784493/100‑1 (MQ=255) aGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACCaa > 2:1864402/1‑100 (MQ=255) gCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTaac > 2:3341257/1‑100 (MQ=255) | GTGACCGCTCGGGGAAGGCAAAATTGCCTCTGGGAAAGCATTGCGCGGGGTCCGGCGCTCATCAACAATCGGGG‑GGCAGCAAGGGGCTGAAACGGGAAAGCCCCTCCCGAAGAAGGGGCCTTGTATAAGGAAAGGGTTATGATGAAGCTCGTCATCATACTGGTTGTGTTGTTACTGTTAAGTTTCCCGACTTACTAAC > NC_000913/3195003‑3195201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |