| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,701,868 | C→A | 40.6% | R334L (CGT→CTT) | dppF ← | dipeptide/heme ABC transporter ATPas |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,701,868 | 0 | C | A | 40.6% | 120.9 / 196.0 | 158 | R334L (CGT→CTT) | dppF | dipeptide/heme ABC transporter ATPas |
| Reads supporting (aligned to +/- strand): ref base C (59/35); new base A (39/25); total (98/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-01 | |||||||||||
Only 100 of 161 total aligned reads displayed.
GCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGC > NC_000913/3701769‑3701964 | cTGGCTGATTCTGCTGTACGGCGTTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGc > 2:682258/1‑100 (MQ=255) cTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGc < 2:265098/100‑1 (MQ=255) cTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGc < 2:2055487/100‑1 (MQ=255) gCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGc > 1:1179041/1‑100 (MQ=255) gCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGc < 2:1803786/100‑1 (MQ=255) cTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGTCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCg < 2:3002805/100‑1 (MQ=255) ctgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGAtttt > 1:4078554/1‑100 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTc > 2:4178099/1‑100 (MQ=255) tgctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTc > 1:2936493/1‑100 (MQ=255) gctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCa < 1:3387406/100‑1 (MQ=255) gctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCa > 2:3351735/1‑100 (MQ=255) ctgTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCAt > 2:2388858/1‑100 (MQ=255) gTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATcc > 1:3254424/1‑100 (MQ=255) gTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATcc < 1:1481319/100‑1 (MQ=255) tACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCt > 2:1265422/1‑100 (MQ=255) aCGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTg > 2:1428536/1‑100 (MQ=255) aCGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTg > 2:1563846/1‑100 (MQ=255) cGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCACATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGa > 1:1380378/1‑100 (MQ=255) gCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATc < 2:1557750/100‑1 (MQ=255) gCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATc > 1:416462/1‑100 (MQ=255) gCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATc < 2:347007/100‑1 (MQ=255) cATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCa < 2:3606824/100‑1 (MQ=255) tATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCaaa > 1:3529158/1‑100 (MQ=255) tATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCaaa < 2:4108284/100‑1 (MQ=255) tGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAAc > 2:727776/1‑100 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAAc > 1:1698509/1‑99 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACa > 1:2773647/1‑100 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACa > 2:3640759/1‑100 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACa > 2:3128297/1‑100 (MQ=255) gCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTGGTGAGTTAACGCTGCGGATTCTCATCCTGATAAACAGCAAAACa > 1:649963/1‑100 (MQ=255) cTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACaa < 2:1271009/100‑1 (MQ=255) cTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACaa > 1:1593883/1‑100 (MQ=255) cTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACaa < 1:3246189/100‑1 (MQ=255) tGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGc > 2:3306992/1‑100 (MQ=255) gTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCt > 2:2216616/1‑100 (MQ=255) ccACTGTTGAAGCTGATTGAGTAACCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa < 1:3127778/100‑1 (MQ=255) ccACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa > 2:285854/1‑100 (MQ=255) ccACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa > 2:2586717/1‑100 (MQ=255) ccACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCa > 2:2205607/1‑100 (MQ=255) cACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAg > 2:1495119/1‑100 (MQ=255) aCTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGt < 2:4229021/100‑1 (MQ=255) cTGATGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTCTGTGAGATAAAGCAGCGGATTGTCCTCCTGATCAACAGCAAAACAAGCTACCAGt > 1:105385/1‑99 (MQ=255) tGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTg < 1:735581/100‑1 (MQ=255) tGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTg < 1:2138026/100‑1 (MQ=255) gTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGa > 2:3823303/1‑100 (MQ=255) gTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGa > 1:35585/1‑100 (MQ=255) tGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAcc > 2:2256840/1‑100 (MQ=255) gAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAccg > 2:3857861/1‑100 (MQ=255) aGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGAccgcc > 1:3371387/1‑100 (MQ=255) cTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGt < 1:3900976/100‑1 (MQ=255) taactcacaaaaCCGGGGC‑CATGCGCTCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 2:1760724/10‑100 (MQ=25) tGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 2:425645/1‑100 (MQ=255) tGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 1:1794285/1‑100 (MQ=255) tGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 2:103184/1‑100 (MQ=255) tGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 2:632908/1‑100 (MQ=255) tGATTGAGTAAACCGGAGCGAATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTa > 1:2603128/1‑100 (MQ=255) ttGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTc > 1:2062993/1‑100 (MQ=255) tGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCt > 1:3693138/1‑100 (MQ=255) tGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCATAGTCt < 1:194624/100‑1 (MQ=255) gAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtt > 2:2725070/1‑100 (MQ=255) aGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCttt < 2:259680/100‑1 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtttt < 1:1121921/100‑1 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtttt > 1:2142308/1‑100 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtttt > 1:2984993/1‑100 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCtttn < 1:3288808/100‑2 (MQ=255) gTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATCTTCATCCTGATCAACAGCAAGACGAGCTCGCAGTTGACCGCagtagtaaat > 1:3691806/1‑95 (MQ=255) caaaaCCGGGGC‑CATGCGCTCCGGGTTTGTGAGTTAAAGATGCGGATTTTCATCCGGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTc > 1:1051556/3‑96 (MQ=255) tAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTa < 2:1504263/100‑1 (MQ=255) aaaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAg > 2:2002526/1‑100 (MQ=255) aaaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAg < 1:682255/100‑1 (MQ=255) aaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGc > 1:4227539/1‑100 (MQ=255) aaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGc > 2:320894/1‑100 (MQ=255) aaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCTTAGTCTTTTAGc < 2:2809803/100‑1 (MQ=255) aaCCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGGAGTCTTTTAGc > 2:1907966/1‑100 (MQ=255) ccGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTg > 2:1226431/1‑100 (MQ=255) ccGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTg > 2:756556/1‑100 (MQ=255) ggAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGC‑AAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCgg > 1:3102125/1‑100 (MQ=255) aGCGCATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGc > 1:4219098/1‑100 (MQ=255) gcgcATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCt > 2:4182900/1‑100 (MQ=255) gcgcATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCt > 2:3673700/1‑100 (MQ=255) cgcATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTg < 1:2042285/100‑1 (MQ=255) cATG‑GCCCCGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCa > 2:1113692/1‑100 (MQ=255) cccGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTggg < 2:1895416/100‑1 (MQ=255) cccGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTggg < 2:2827293/100‑1 (MQ=255) cccGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTggg < 1:578239/100‑1 (MQ=255) cccGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTggg < 1:2716566/100‑1 (MQ=255) cccGGTTTTGTGAGTCAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTggg < 2:4214471/100‑1 (MQ=255) ccGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAATACAAGCTACCAGTTTGCCGCCGGAGTCTTTTAGCTGCGGCTGCAACTg < 1:2364756/97‑1 (MQ=255) ccGGTTTTGTGAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGt < 2:2774479/100‑1 (MQ=255) ggTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGc > 1:3069088/1‑100 (MQ=255) gtgCGTTCACGCTCCGGATCTTCATCCTGTTCAACAGCAAAACAAGCTACCAGTTAAACACCGTAGGCATTTAGCTGCGGCTGCAACTgggccccggcgc > 1:3509201/1‑91 (MQ=255) gtgAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGc > 2:706356/1‑100 (MQ=255) gtgAGTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGc > 2:3530611/1‑100 (MQ=255) tgAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGcc < 1:2204343/100‑1 (MQ=255) tgAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGcc < 2:4078576/100‑1 (MQ=255) tgAGTTAAAGCTGCGGATTTTCATCTTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGcc > 2:934745/1‑100 (MQ=255) aGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGa > 2:2438574/1‑100 (MQ=255) gTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGGCCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGaa < 1:1879078/100‑1 (MQ=255) gTTAAAGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGaa > 2:2949115/1‑100 (MQ=255) tAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAgc > 1:758844/1‑100 (MQ=255) | GCCTGGCTGATTCTGCTGTACGGCATTTTGCTATGCTTGTCGCCACTGTTGAAGCTGATTGAGTAAACCGGAGCGCATG‑GCCCCGGTTTTGTGAGTTAACGCTGCGGATTTTCATCCTGATCAACAGCAAAACAAGCTACCAGTTGACCGCCGTAGTCTTTTAGCTGCGGCTGCAACTGGGTGCAGGGGCCGAAGC > NC_000913/3701769‑3701964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |