| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 27.0% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 27.0% | 613.8 / 217.5 | 295 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (103/107); new base T (74/2); total (186/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.36e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705949‑3706147 | gattttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAgcg > 2:1553592/11‑100 (MQ=18) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg < 1:1531116/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:3759090/100‑1 (MQ=255) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATc > 2:2683847/1‑100 (MQ=255) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:639892/6‑100 (MQ=17) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2557763/5‑100 (MQ=17) taggCCGGATAAGGCGTTTACGCCGCATCTGGCCTACAAATTCTTCCAAATTCAATATATTGCA‑GA‑AA‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:289032/4‑100 (MQ=18) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATAAATTGCA‑GA‑GT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 1:3001215/4‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGC‑‑‑A‑AT‑TCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2839328/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTTTGCAAATTCAATATATTGC‑‑‑A‑AT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:396916/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCA‑GG‑AA‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGc > 1:955708/3‑100 (MQ=18) aTGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc < 1:1191859/100‑1 (MQ=255) tGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 2:1910432/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTTCAAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCAC‑‑ATAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2569422/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCAAATTCAACATATTGC‑‑‑A‑AT‑TCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGct > 2:598624/2‑99 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 2:1153356/2‑100 (MQ=25) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCa > 1:3434330/1‑99 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAATTC‑TGCAAATTCAACAAATTGC‑‑GA‑ATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1646114/1‑100 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:438969/1‑99 (MQ=17) ccggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:4237665/9‑98 (MQ=21) ccGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGTGCATCAGGCAtt < 2:2811865/100‑1 (MQ=255) cggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtt > 1:1786424/8‑100 (MQ=17) cggataaggcgTTCACGCCGCATCCGGCCTACAAAGTCGTATAAATTCAATGTATTGCA‑GT‑TT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatc > 2:1626921/8‑97 (MQ=25) cGGATAAGGCGGTCACGCCGCATCCGGCCTACGAAACCGCAAGAATTCAATATCTTGCA‑GG‑AG‑CGGT‑‑GTAGGCCTGATAAGCGTAGCGAATCAGGCa > 1:1565797/1‑97 (MQ=18) tgataaggcgTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctt < 1:3466821/94‑5 (MQ=21) ggataaggcgTTTACGCCGCATCCGGCCTACAAAAGCATGCAAATTCAATATATTGCA‑GA‑GT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:785283/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaattc > 1:280916/7‑96 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAAATCGCTTAAATTCAATATATTGCA‑CC‑AT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattc > 2:1327207/7‑99 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GAGAT‑TAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:101432/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAACATGCAAATTCAATAGATTGCA‑GA‑GA‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 1:1320148/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaacta > 1:224714/7‑96 (MQ=25) gataaggcgTTCACGCCGCATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGG‑AC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCagctta > 2:3466834/6‑95 (MQ=21) gataaggcgTTCACGCCGCATCCGACCCACAAAGTCTTGCAAAATCAATAAATTGCAGGA‑AC‑GAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaactac > 2:3734328/6‑95 (MQ=25) gataacgcgTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCC‑GA‑AA‑CCCT‑‑GTAGGCCTCAACAGCGGCGCGGATCACGc > 1:2085452/7‑94 (MQ=9) gATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAttttt < 2:2747352/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:4112468/100‑1 (MQ=255) taaggcgTTCACGCCGCATCCGGCCTACAAGATCGTGCAAATTCAATATATTGCA‑TG‑AG‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAAGCAGTtttgc > 2:1971434/4‑100 (MQ=17) tGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 2:2425261/1‑100 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:1424529/1‑100 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 2:224487/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATACGCGGAGCGCATCAGGCATTtttgcct < 2:2605978/100‑1 (MQ=255) ggcgTTCACGCCGCATCCGGCCTACGAAATCGTGCTAATTCAATATATTGTG‑GG‑CT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgcgtt < 1:1948023/100‑1 (MQ=21) cgTTCACGCCTTATCCGGCCTACAAAATCATGCAAACTCAATACATTGCC‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAACGCATCAGGCATTtttgcct > 1:228780/1‑97 (MQ=17) cgTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTttttccttt > 2:429108/1‑99 (MQ=255) ttAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 2:871169/99‑1 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa > 2:348360/1‑100 (MQ=255) tAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATGGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 1:2116188/100‑1 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 2:2132203/1‑100 (MQ=255) aCGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc > 1:3835576/1‑100 (MQ=255) aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:3765750/100‑1 (MQ=255) aTCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:1683638/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:692668/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 1:1910428/100‑1 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 2:4073396/1‑100 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa > 1:3990390/1‑100 (MQ=255) ccGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTa < 2:2507916/100‑1 (MQ=255) gCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 2:1841856/100‑1 (MQ=255) ccTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:3862681/100‑1 (MQ=255) cTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCt < 1:3177516/100‑1 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:4147880/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 1:3591117/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 2:532106/1‑100 (MQ=255) aCAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTA‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAGTTTTGCCTTTGCCATCAGTCTTGTATGGCttt > 2:3016187/1‑100 (MQ=255) cAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCGGGCATTTTTGCCTTTGCCATCAGTATTGTATGGCtttt < 1:2630123/100‑1 (MQ=255) aTCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTATGCCTGATAAGCGGAGCGCACCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAat < 1:1465236/99‑1 (MQ=255) gTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt > 2:708234/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 2:2028906/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 2:1511471/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:3497755/100‑1 (MQ=255) gCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 1:2911919/100‑1 (MQ=255) aaaTTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCTGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc < 1:2739882/97‑1 (MQ=255) tCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:3150924/100‑1 (MQ=255) cAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 2:3896522/100‑1 (MQ=255) aaTACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCCATagag < 1:3725661/98‑1 (MQ=255) ttGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAATCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc > 2:2597930/1‑100 (MQ=255) tGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg > 2:2909039/1‑100 (MQ=255) gCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg > 1:2529320/1‑99 (MQ=255) gCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa < 1:2511206/100‑1 (MQ=255) gCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGa > 2:703505/1‑100 (MQ=255) cA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGaa > 1:1594469/1‑100 (MQ=255) a‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:3245726/100‑1 (MQ=255) gA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 2:2062951/100‑1 (MQ=255) a‑aT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTg < 1:814430/100‑1 (MQ=255) aT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGa < 2:1268009/100‑1 (MQ=255) tttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGTCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt > 1:2555370/1‑99 (MQ=255) tttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATg < 2:3331996/100‑1 (MQ=255) ttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGt < 1:2423206/100‑1 (MQ=255) c‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGttt > 2:1471837/1‑100 (MQ=255) c‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGttt > 2:3634255/1‑100 (MQ=255) gCCTGATAAGCGGAGCGCATCAGGCATTTTTGTCTTTGCAATCAGTATTGTATGGCTTTTACTTATTCGATAGAGACGTTATAGAAGTGATGTTTGCCTa < 1:4066723/100‑1 (MQ=37) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa > 2:1670034/1‑100 (MQ=255) ccTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTaa < 2:2405385/100‑1 (MQ=255) cTGATAAGCGGAGCGCATAAGGCATTTTTGCCTTTTCCATCAGTCTTGTATCGCTTTTAATTATTCGATAGAGCCGTTTACGAAGTGATGTTTGCCTAAt > 1:3948043/1‑100 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTTTTTTTTTTTTCAGTCTTGTATGGCCTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTCAt > 1:3879287/1‑99 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg > 2:1764514/1‑100 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 1:4083380/100‑1 (MQ=255) aaGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATc < 1:2039935/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 1:2189407/1‑100 (MQ=255) cGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAc < 2:3409514/100‑1 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:3083738/100‑1 (MQ=255) | TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTACAAAATCGTGCAAATTCAATACATTGCA‑GA‑AT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705949‑3706147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |