| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,802,190 | T→C | 38.3% | K290R (AAA→AGA) | waaO ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,802,190 | 0 | T | C | 38.3% | 138.4 / 192.2 | 183 | K290R (AAA→AGA) | waaO | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑ alpha‑1,3‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (49/64); new base C (40/30); total (89/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.39e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 | |||||||||||
Only 100 of 191 total aligned reads displayed.
AGATATCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGTTGGTTA > NC_000913/3802091‑3802289 | aGATATCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCAtttt > 2:1327238/1‑100 (MQ=255) tatCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTg > 1:1402691/1‑100 (MQ=255) tatCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTg < 2:1983971/100‑1 (MQ=255) atCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGc < 2:768400/100‑1 (MQ=255) tCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGcc > 2:4148986/1‑100 (MQ=255) tATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTc > 2:217376/1‑100 (MQ=255) tATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTc > 1:3733612/1‑100 (MQ=255) tGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCa < 1:1227897/100‑1 (MQ=255) cTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATa > 2:328938/1‑100 (MQ=255) cTTTTTAAGAATATATTTTGCGCTATATCTTAATTGATTGTTATTGTTCGGTTTCAGCAACGACATATTATTCCATAGATAAGCATTTTTAGCCTCCATa > 1:3290430/1‑100 (MQ=255) ttttAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATa > 1:3327474/1‑98 (MQ=255) ttttAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATaaa < 1:260792/100‑1 (MQ=255) tttAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTTGGTTTCAGCAACGCCGTATTCTTCTATGGCGAAGCATTTCTTGCCTCCATa > 1:2471006/1‑97 (MQ=255) tttAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAg < 2:3095291/100‑1 (MQ=255) tttAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAg < 1:3295444/100‑1 (MQ=255) tAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCATCCATAAAGGc > 1:2124663/1‑100 (MQ=255) aGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCtt > 1:830307/1‑100 (MQ=255) gCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTtg < 1:4020451/100‑1 (MQ=255) cATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTtgt > 2:455849/1‑100 (MQ=255) cATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTtgt < 1:252126/100‑1 (MQ=255) cATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTtgt < 2:2766362/100‑1 (MQ=255) cATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTtgt < 2:1108838/100‑1 (MQ=255) cATATGTTTTGCGCTATATCCTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTtgt > 1:2616085/1‑100 (MQ=255) tatGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGa < 1:3177832/100‑1 (MQ=255) tatGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGa < 2:54666/100‑1 (MQ=255) tatGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGa < 1:904315/100‑1 (MQ=255) gTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATAc > 2:4187696/1‑100 (MQ=255) ttttGTACTATATCTTACTTGATTCCCATCCTAAGGTTCCAACAACGCCGTATTCTTCCATGGCAAAGCATTTCTTGCCTCCATACAGGCTTGTGa < 1:3839285/96‑1 (MQ=255) ttttGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACa < 1:3868878/100‑1 (MQ=255) tttGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAg < 2:1290275/100‑1 (MQ=255) tttGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAg < 2:176324/100‑1 (MQ=255) ttGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAgg < 1:1572929/100‑1 (MQ=255) ttGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAgg < 1:2443469/100‑1 (MQ=255) tGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGa < 2:2107876/100‑1 (MQ=255) tGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGa > 1:1712144/1‑100 (MQ=255) gcgcTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGAt < 1:1361988/100‑1 (MQ=255) cTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAAt > 1:1031798/1‑100 (MQ=255) tataTCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATc < 2:789417/100‑1 (MQ=255) atatCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATcc < 2:2391863/100‑1 (MQ=255) tatCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATccc < 2:3615395/100‑1 (MQ=255) atCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCa < 1:2714699/100‑1 (MQ=255) tCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGAGACAGGATAATCCCAg > 2:4211837/1‑100 (MQ=255) tCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAg > 1:2060243/1‑100 (MQ=255) tAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGcc > 2:3981708/1‑100 (MQ=255) aaTTGATTGCTATTGTTCGTTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGccc < 1:2827231/100‑1 (MQ=255) attgattgCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTTTTTTTTTATAGGCTTGTGATACAGGATAATCCCa > 1:3151991/1‑94 (MQ=255) tgattgCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCGCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAAt < 1:1524111/100‑1 (MQ=255) attgCTATTGTTCGTTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCa < 1:3537244/100‑1 (MQ=255) tgCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATg < 2:145938/100‑1 (MQ=255) tgCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATg > 1:3536339/1‑100 (MQ=255) ngCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATg > 1:1767924/2‑100 (MQ=255) gCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGc < 2:1555106/100‑1 (MQ=255) gCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGc > 2:3243919/1‑100 (MQ=255) gCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGc > 2:4106907/1‑100 (MQ=255) cTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGcc > 1:1854571/1‑100 (MQ=255) ttGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAgg > 2:2849358/1‑100 (MQ=255) ttGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAgg > 2:1229746/1‑100 (MQ=255) tGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAggg < 1:1680638/100‑1 (MQ=255) tGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAggg < 2:2818750/100‑1 (MQ=255) gTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGc > 2:1530849/1‑100 (MQ=255) ttCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCt > 2:3887879/1‑100 (MQ=255) tCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCtt < 2:375487/100‑1 (MQ=255) cGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttg > 1:2919055/1‑100 (MQ=255) ggTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttgg < 1:1455353/100‑1 (MQ=255) gattgaGCCACGACGTTTTTTTCCTGCGCGAAGCCTTTTTTTCCTCCCTAATGGCTTATGATACACTATTATCCCAGGCCCAATCATAGCAGGGCttg > 1:612594/6‑98 (MQ=255) tttCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttggtt > 1:1007086/1‑100 (MQ=255) tttCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttggtt < 1:3011217/100‑1 (MQ=255) tttCAGCAACGCCGTATTCTTCAATGGCGAAGCATTTCTTGCCTCCATAAGGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttggt < 1:3599650/99‑1 (MQ=255) tCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCttggttgg > 2:3176950/1‑100 (MQ=255) aGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGcc > 1:4191456/1‑100 (MQ=255) ggaaCGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGccc < 1:4132932/98‑1 (MQ=255) gCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTTTTTCTATAAATTTTTTTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGccc > 2:2303036/1‑100 (MQ=255) gCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGccc > 2:2454523/1‑100 (MQ=255) gCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGccc < 2:4128403/100‑1 (MQ=255) cAACGCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCg < 2:3481834/100‑1 (MQ=255) aCGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGat > 1:196927/1‑100 (MQ=255) gCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGAGACAGGATAATCCCAGGCCCAACCAAGCCCTGGCatgattggggctggg < 1:517911/99‑8 (MQ=25) gCCGTATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGatat > 1:3675619/1‑100 (MQ=255) ccGTATTCTTCCATGGCGAAGCATTTTTTTTTTATTTTTTGACTTGTGATACAGGATAATTTAAGGCCTTATCATTTCGGGGCTTGGTTGGCCCGTtata > 1:2565410/1‑100 (MQ=255) cGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATaa < 2:1007089/100‑1 (MQ=255) tATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATg > 1:1026399/1‑100 (MQ=255) tATTCTTCCATGGCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATg < 1:4189013/100‑1 (MQ=255) ttcttcCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGa < 2:1667674/100‑1 (MQ=255) cttcCATGGCGAAGCATTTTTTTCTTTTTTTTTATCTTGTAATACGGGATAATCCTAGCCCCATTCATGCCAGGGCTTGGTTGGGCCGTTATAATGTAt > 1:1743144/1‑99 (MQ=255) tcCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATaaa < 2:3024580/100‑1 (MQ=255) tcCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATaaa < 1:2432717/100‑1 (MQ=255) tcCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATaaa > 2:1902038/1‑100 (MQ=255) aTGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAAt < 2:1023605/100‑1 (MQ=255) tGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATa > 2:3394849/1‑100 (MQ=255) ggCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAg < 2:1059759/100‑1 (MQ=255) ggCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAg > 1:3550538/1‑100 (MQ=255) ggCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAg < 2:3151700/100‑1 (MQ=255) gCGAAGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGt > 2:3589768/1‑100 (MQ=255) aGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCg < 2:4263718/100‑1 (MQ=255) aGCATTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCg > 2:2733301/1‑100 (MQ=255) gCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGt > 2:2504810/1‑100 (MQ=255) aTTTCTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGtt > 2:59513/1‑99 (MQ=255) ttttttGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGTTgg > 2:2914443/1‑100 (MQ=255) ttttGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGTTGGtt < 2:2282244/100‑1 (MQ=255) tttGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGTTGGTTa < 1:3707533/100‑1 (MQ=255) | AGATATCTATGCTTTTTAAGCATATGTTTTGCGCTATATCTTAATTGATTGCTATTGTTCGGTTTCAGCAACGCCGTATTCTTCCATGGCGAAGCATTTTTTGCCTCCATAAAGGCTTGTGATACAGGATAATCCCAGGCCCAATCATGCCAGGGCTTGGTTGGCCCGATATAATGGATAAAAATAGTATCGTTGGTTA > NC_000913/3802091‑3802289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |