BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	3,950,468	G→T	100%	intergenic (+48/‑39)	ilvL → / → ilvX	ilvG operon leader peptide/uncharacterized protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,950,468	0	G	T	100.0%	422.3 / ‑6.7	139	intergenic (+48/‑39)	ilvL/ilvX	ilvG operon leader peptide/uncharacterized protein
Reads supporting (aligned to +/- strand): ref base G (1/1); major base T (65/68); minor base C (2/0); total (70/69)

Only 100 of 145 total aligned reads displayed.

GTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATG  >  NC_000913/3950370‑3950562

gtgATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGGACCTTTCGGTGCGGGG‑Gt                                                                                               <  2:3418624/100‑1 (MQ=38)

  gATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGCACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Cttt                                                                                             >  1:3016885/1‑100 (MQ=255)

    ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑tttttt                                                                                           >  1:1754634/1‑100 (MQ=255)

    ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑tttttt                                                                                           <  1:2393669/100‑1 (MQ=255)

    ttattaTCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACACCCGCACCGAAAGGTCCGGGG‑tttttt                                                                                           >  1:2427760/1‑100 (MQ=255)

     tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Ttttttt                                                                                          >  2:2697128/1‑100 (MQ=255)

     tattatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Ttttttt                                                                                          >  1:2369392/1‑100 (MQ=255)

      attatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATAAAGCCTTAACGCACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Tatttttt                                                                                         >  1:1473806/1‑100 (MQ=255)

       ttatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Ttttttttt                                                                                        >  2:1406986/1‑100 (MQ=255)

        tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTg                                                                                       <  1:1341583/100‑1 (MQ=255)

        tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTg                                                                                       >  2:511006/1‑100 (MQ=255)

        tatCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTg                                                                                       <  2:2429540/100‑1 (MQ=255)

        tatCCCACCGTGCAGGCCTGCACTTGGACGACTAAAGCCTTACAGATCAAGCCTTAACTAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑Ttttttttt                                                                                        <  1:4040695/99‑1 (MQ=255)

         atCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTg                                                                                       >  1:4113942/1‑99 (MQ=255)

         atCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGa                                                                                      >  1:3964740/1‑100 (MQ=255)

         atCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGa                                                                                      <  2:373581/100‑1 (MQ=255)

          tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAc                                                                                     <  2:3877083/100‑1 (MQ=255)

          tCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCATAAAGATCAAGCCTTAACGAACAAAGACACCCGCACCGAAAGGTCCGGGG‑CGTTTTTTTg                                                                                       >  1:2461855/1‑98 (MQ=255)

           cccACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAcc                                                                                    <  2:1900878/100‑1 (MQ=255)

             cACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCtt                                                                                  >  1:3015593/1‑100 (MQ=255)

              aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCt                                                                                   >  2:2562900/1‑98 (MQ=255)

              aCCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTa                                                                                 <  2:1458160/100‑1 (MQ=255)

               ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTaa                                                                                >  2:2062570/1‑100 (MQ=255)

               ccGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTaa                                                                                <  2:2959733/100‑1 (MQ=255)

                 gTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGAGCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTaaaa                                                                              <  1:967474/100‑1 (MQ=255)

                   gCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAAc                                                                            <  1:1730180/100‑1 (MQ=255)

                    cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGTCCTTAAAAACa                                                                           >  1:533861/1‑100 (MQ=255)

                    cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACa                                                                           >  1:7987/1‑100 (MQ=255)

                    cGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACa                                                                           <  2:4037229/100‑1 (MQ=255)

                      gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATa                                                                         <  1:3856677/100‑1 (MQ=255)

                      gggCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATa                                                                         <  2:4107968/100‑1 (MQ=255)

                        gCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAAc                                                                       >  2:3573004/1‑100 (MQ=255)

                          tGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAAc                                                                       >  1:215075/1‑98 (MQ=255)

                              cTTGGACAAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCgagg                                                                  <  2:407215/99‑1 (MQ=255)

                                tGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCC‑GGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCa                                                              >  2:1969743/1‑100 (MQ=255)

                                 ggACGAGGAAAGGCTTAGAGATCAAGTCTTAACGAACTAAGACACCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGAACTTAAAAACATAATCGAGGTGCa                                                              <  1:1533562/100‑1 (MQ=255)

                                  gACGAGGAAAGGCTTAGAGATCAAGCGTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg                                                             >  2:2595392/1‑100 (MQ=255)

                                  gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg                                                             >  2:3249633/1‑100 (MQ=255)

                                  gACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAg                                                             >  1:2872022/1‑100 (MQ=255)

                                   aCGAGGAAAGGCTTAGAGATAAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGa                                                            >  1:2609467/1‑100 (MQ=255)

                                    cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGAc                                                           <  1:2891944/100‑1 (MQ=255)

                                    cGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGAc                                                           >  1:2827915/1‑100 (MQ=255)

                                     gAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACa                                                          >  2:616234/1‑100 (MQ=255)

                                       ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                                        >  2:2186185/1‑100 (MQ=255)

                                       ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                                        >  2:3033869/1‑100 (MQ=255)

                                       ggAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                                        <  1:134367/100‑1 (MQ=255)

                                        gAAAGCCTTAGAGGTCAAGCCCGAACGACATAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAAt                                                        <  2:1211424/99‑1 (MQ=255)

                                          aaGGCTTAGAGATCAATCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa                                                     <  2:794452/100‑1 (MQ=255)

                                          aaGGCTTAGAGATCAAGCCGTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGaa                                                     <  2:794602/100‑1 (MQ=255)

                                            ggCTTAGAGATCAAGCCTTAACGAACTGAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGTCCTTAAAAACATAACCGAGGAGCAGACAATGaa                                                     <  1:2567515/98‑1 (MQ=255)

                                            ggCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAt                                                    <  2:3106833/99‑1 (MQ=255)

                                             gCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATaa                                                  >  2:3855272/1‑100 (MQ=255)

                                               ttAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACa                                                >  2:3549500/1‑100 (MQ=255)

                                                tAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTTACCTCAAAAACATAACCGAGGAGCAGACAATGAATAAc                                                 >  1:713524/1‑98 (MQ=255)

                                                 agagATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTACAAACATAACCGAGGAGCAGACAATGAATAACa                                                >  1:3944465/1‑98 (MQ=255)

                                                    gaTCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGcaca                                           >  1:3770966/1‑100 (MQ=255)

                                                      tCAAGCTTTTACCAACTAATGCCCCCTCACCGAAAGGTCCTGGG‑TTTTTTTTTGACCTTAAAAACATATCCGACGCGCAGACTATGAATAACGGCACaaa                                         <  1:2680908/100‑1 (MQ=255)

                                                          gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc                                     >  2:3984108/1‑100 (MQ=255)

                                                          gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc                                     >  2:3931028/1‑100 (MQ=255)

                                                          gCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTc                                     <  1:518951/100‑1 (MQ=255)

                                                           ccTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCt                                    >  2:4242012/1‑100 (MQ=255)

                                                            cTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTg                                   <  1:616232/100‑1 (MQ=255)

                                                             ttAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                                  <  1:3195917/100‑1 (MQ=255)

                                                              tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGtt                                 >  2:3802495/1‑100 (MQ=255)

                                                              tAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGt                                  <  2:4272014/99‑1 (MQ=255)

                                                               aaCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGttt                                <  1:74877/100‑1 (MQ=255)

                                                                aCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc                               >  2:2736578/1‑100 (MQ=255)

                                                                aCGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtc                               >  2:611256/1‑100 (MQ=255)

                                                                 cGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtct                              >  2:2007048/1‑100 (MQ=255)

                                                                 agAACTAAGGCCCCCGCACCGAAAGGTCCGGGGTTTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGttt                                <  1:3621725/98‑1 (MQ=255)

                                                                  gAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTtctc                             <  1:1454197/100‑1 (MQ=255)

                                                                   aaCTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa                            <  2:2416424/100‑1 (MQ=255)

                                                                   aaCTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCa                            <  2:1406387/100‑1 (MQ=255)

                                                                    aCTAAGACCCCAGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGTAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCaa                           <  1:872692/100‑1 (MQ=255)

                                                                     cTAAGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAg                          <  1:1984006/100‑1 (MQ=255)

                                                                       aaGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt                        >  2:2129004/1‑100 (MQ=255)

                                                                       aaGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt                        <  2:1654777/100‑1 (MQ=255)

                                                                       aaGACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGAt                        <  2:3414625/100‑1 (MQ=255)

                                                                         gACCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTc                      >  2:276526/1‑100 (MQ=255)

                                                                          aCCCCCGCACCGAAAGGTCCGGGG‑TTTTTTTTTTTTTTTTTTAACATAAACGAGGAGCAGACAATGAATAAGAGTACTAAATTTTGTTTCTCAAGATTCa                     >  1:35790/1‑100 (MQ=255)

                                                                           cccccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg                    <  1:4109063/100‑1 (MQ=255)

                                                                           cccccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAg                    <  2:1180599/100‑1 (MQ=255)

                                                                            ccccTCACCGAAAGGTCCGGGG‑TTTTTGTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg                   <  1:3653907/100‑1 (MQ=255)

                                                                            ccccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAgg                   >  2:1555159/1‑100 (MQ=255)

                                                                              ccGCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGa                  <  2:1891633/99‑1 (MQ=255)

                                                                                gCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg               <  2:3827153/100‑1 (MQ=255)

                                                                                gCACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACgg               <  1:2562893/100‑1 (MQ=255)

                                                                                 cACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg              <  2:3248042/100‑1 (MQ=255)

                                                                                 cACCGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACggg              <  2:2704454/100‑1 (MQ=255)

                                                                                 cACCGAAAGGTCCGGGG‑ATTTTTTTTGAACTAATCAACATAACTGTGCAGCAGACAATGATTGACAGCACAAAATTCTGTTTCTCGACATTCAGGaagag              >  1:3274792/1‑96 (MQ=255)

                                                                                   ccGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGa            <  2:3068499/100‑1 (MQ=255)

                                                                                    cGAAAGGTCCGGGG‑TTTTTTTTTGATCTTAACACAATCACCGAGGAGCAGACAATGAATAACAGCAAAAAATTCTGTTTCTCAAGATTCAGGACGGGGa            <  2:195275/99‑1 (MQ=255)

                                                                                    cGAAAGGTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGCTTCAGGACGGGGaa           >  1:3689811/1‑100 (MQ=255)

                                                                                          gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact     >  2:227433/1‑100 (MQ=255)

                                                                                          gTCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaact     >  2:1231781/1‑100 (MQ=255)

                                                                                           tCCGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAactaacta    <  2:3015605/100‑1 (MQ=255)

                                                                                            ccGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAactaactan   <  1:1107683/100‑2 (MQ=255)

                                                                                            ccGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTAt   >  2:569400/1‑100 (MQ=255)

                                                                                            ccGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAAAAAAAGAAAAAAATTCTGTTTCTCAAGATTCAGGACGGGGaactaac      <  1:2063647/97‑1 (MQ=255)

                                                                                             cGGGG‑TTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATg  <  1:164788/100‑1 (MQ=255)

GTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAACTAAGACCCCCGCACCGAAAGGTCCGGGG‑GTTTTTTTTGACCTTAAAAACATAACCGAGGAGCAGACAATGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATG  >  NC_000913/3950370‑3950562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`