| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,105,396 | A→T | 58.0% | L92Q (CTG→CAG) | cpxR ← | response regulator in two‑component regulatory system with CpxA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,105,396 | 0 | A | T | 58.0% | 97.3 / 226.3 | 182 | L92Q (CTG→CAG) | cpxR | response regulator in two‑component regulatory system with CpxA |
| Reads supporting (aligned to +/- strand): ref base A (35/41); new base T (45/60); total (81/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCGATAC > NC_000913/4105297‑4105495 | tGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCa > 2:3914876/1‑100 (MQ=255) gCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAg < 2:3701187/100‑1 (MQ=255) gCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAg < 2:36090/100‑1 (MQ=255) cTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGc < 2:3235553/100‑1 (MQ=255) cTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGc > 1:4036658/1‑100 (MQ=255) tGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCt > 2:2320732/1‑100 (MQ=255) gTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTc > 2:1048029/1‑100 (MQ=255) gTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTc > 2:1186643/1‑100 (MQ=255) gTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTc < 2:1575271/100‑1 (MQ=255) ttGTTCGCTCCAGTGCTAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCa < 1:30009/100‑1 (MQ=255) ttGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCa < 2:3204362/100‑1 (MQ=255) tGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCCCGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCa < 1:352670/99‑1 (MQ=255) gctcgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAg > 1:2958605/1‑100 (MQ=255) ctcgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGTTCAAgg < 1:2781546/100‑1 (MQ=255) ctcgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCaatg < 2:2878970/100‑3 (MQ=255) ctcgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAgg > 1:1103464/1‑100 (MQ=255) ctcgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAgg < 1:791848/100‑1 (MQ=255) cgctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGcc > 1:3063797/1‑100 (MQ=255) ctcCAGTGCGAACGGCGCAGGATCTCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCg < 1:1013176/99‑1 (MQ=255) ctcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCAGTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCga < 1:2228351/100‑1 (MQ=255) tcCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCgag < 1:726074/100‑1 (MQ=255) cAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGaa < 1:276987/100‑1 (MQ=255) gTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAAcg < 1:1228496/100‑1 (MQ=255) gTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAAcg > 1:3593308/1‑100 (MQ=255) tGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAAcgc < 2:4184997/100‑1 (MQ=255) cGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACTATCATTAACCGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCgag < 1:908945/93‑1 (MQ=255) gAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGGGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGAt < 1:3152941/100‑1 (MQ=255) gAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGAt > 2:2526751/1‑100 (MQ=255) gAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGAt < 1:2913380/100‑1 (MQ=255) aaCGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATc < 1:4181821/100‑1 (MQ=255) aGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCAc < 2:3635920/100‑1 (MQ=255) ggATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACt < 2:2747387/100‑1 (MQ=255) ggATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACt > 2:4090639/1‑100 (MQ=255) cgcgcgAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCcg > 2:1802291/1‑100 (MQ=255) gcgAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCcgcgc < 1:3830954/100‑1 (MQ=255) gcgAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCcgcgc > 1:3944118/1‑100 (MQ=255) cgAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCcgcgcg > 1:3275483/1‑100 (MQ=255) aTACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCg < 2:3308384/100‑1 (MQ=255) cGTGTCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCa > 1:2208187/1‑100 (MQ=255) cGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGt > 1:3329956/1‑98 (MQ=255) cGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCa < 2:898489/100‑1 (MQ=255) cGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCa > 1:3332690/1‑100 (MQ=255) cGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCa > 1:1661807/1‑100 (MQ=255) cGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCa > 2:4004447/1‑100 (MQ=255) tGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAAc < 2:2656466/100‑1 (MQ=255) gCCACCAGCTCACGGTCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGCACGCGAACAAGTTCACTGCCGCGCGCCGTCAACa > 1:56097/1‑100 (MQ=255) gCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACa > 1:2581694/1‑100 (MQ=255) gCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACa < 2:211092/100‑1 (MQ=255) gCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACa < 2:2069880/100‑1 (MQ=255) taccaGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATa > 2:989810/2‑100 (MQ=255) caccaGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATa > 2:2919466/1‑100 (MQ=255) accaGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATaa < 1:1637168/100‑1 (MQ=255) ccaGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAAt < 1:3070604/100‑1 (MQ=255) ccaGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAAt < 2:4049394/100‑1 (MQ=255) gCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGAc < 2:2123763/100‑1 (MQ=255) gCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCACCGTCAACATAATGAc > 1:2495047/1‑100 (MQ=255) cTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAAtagat > 2:1579131/1‑96 (MQ=255) cTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACa < 2:1458728/100‑1 (MQ=255) cTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCCCCGTCAACATAATGACa > 1:1382132/1‑100 (MQ=255) cTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCGCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGAc < 1:100267/99‑1 (MQ=255) tCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAg < 2:1696188/100‑1 (MQ=255) cGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATCAGAGGCg > 1:4110061/1‑100 (MQ=255) gATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGt > 2:189170/1‑100 (MQ=255) aTCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTc < 2:2534979/100‑1 (MQ=255) naTTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTg > 1:1532876/2‑100 (MQ=255) cATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTg > 1:3894502/1‑100 (MQ=255) aTTAAACGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTgg < 2:305607/100‑1 (MQ=255) aTTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTgg > 1:3095739/1‑100 (MQ=255) ttAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGgt > 1:3174809/1‑100 (MQ=255) tAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGgtg < 1:2814721/100‑1 (MQ=255) tAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGgtg < 2:257729/100‑1 (MQ=255) aCGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGgtgtg < 1:1883989/99‑1 (MQ=255) cGGTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTc > 2:3052918/1‑100 (MQ=255) cGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTc < 2:3835090/100‑1 (MQ=255) ggTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCt > 2:1245657/1‑100 (MQ=255) gTTTCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTg < 1:489788/100‑1 (MQ=255) tttCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTgg < 2:2178568/100‑1 (MQ=255) ttCGGGAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTgg > 1:2837163/1‑99 (MQ=255) gggAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGaa > 1:2344089/1‑100 (MQ=255) ggAGATAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAg < 1:1239768/100‑1 (MQ=255) ggAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAg < 1:398189/100‑1 (MQ=255) ggAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAg < 1:579284/100‑1 (MQ=255) ggAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAg > 2:1585438/1‑100 (MQ=255) aTAGTCATCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCt < 2:3105318/100‑1 (MQ=255) tAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCtt < 1:1559612/100‑1 (MQ=255) gTCATCTGCGCCCTGCTCAACGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCtttt > 1:2602426/1‑100 (MQ=255) gTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCtttt < 1:226952/100‑1 (MQ=255) tCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTa < 1:4188596/100‑1 (MQ=255) aTCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAAt < 2:2475865/100‑1 (MQ=255) tCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAAtg < 2:1685026/100‑1 (MQ=255) tCTGCGCCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAAtg < 1:1060242/100‑1 (MQ=255) tGCGCCCAGCTCAAGGCCGAGAACGCGATAAAGTACACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAAtgtg < 1:379877/100‑1 (MQ=255) cgcCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTc < 2:2005586/100‑1 (MQ=255) cgcCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTc < 1:3416668/100‑1 (MQ=255) gcCCTGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCg < 2:573909/100‑1 (MQ=255) gcCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCg < 1:92355/100‑1 (MQ=255) cccAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCGa > 2:4150662/1‑100 (MQ=255) cccAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCGa > 2:44144/1‑100 (MQ=255) cccAGCTCAAGGCCGAGAACGCGATCAAGTTCACCGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGACGCGCTTTTAATGTGTCg > 1:1409023/1‑99 (MQ=255) cAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCGATa < 1:368065/100‑1 (MQ=255) | TGCTGTTGCTCGCTCCAGTGCGAACGGCGCAGGATCGCGCGAATACGTGCCACCAGCTCACGATCATTAAACGGTTTCGGGAGATAGTCATCTGCGCCCAGCTCAAGGCCGAGAACGCGATCAAGTTCACTGCCGCGCGCCGTCAACATAATGACAGGCGTCTGGTGTGTCTGGCGAAGTGCTTTTAATGTGTCGATAC > NC_000913/4105297‑4105495 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |