| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 531,655 | C→A | 31.7% | A189A (GCG→GCT) | allS ← | allD operon transcriptional activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 531,655 | 0 | C | A | 31.7% | 240.1 / 154.9 | 173 | A189A (GCG→GCT) | allS | allD operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base C (62/56); new base A (29/26); total (91/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.65e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
ACAATAATCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAGGTATT > NC_000913/531557‑531753 | aCAATAATCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGACGGAAAGCGCCGCAACTgcg > 1:3587539/1‑100 (MQ=255) cAATAATCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTgcgc > 2:4012296/1‑100 (MQ=255) cAATAATCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTgcgc < 2:1964689/100‑1 (MQ=255) aataatCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCt < 2:3581477/100‑1 (MQ=255) ataatCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCtt > 2:1781702/1‑100 (MQ=255) taatCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTc < 2:2657361/100‑1 (MQ=255) atCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTg < 1:4149661/100‑1 (MQ=255) ctctTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGtt < 2:524318/100‑1 (MQ=255) ctctTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGtt < 2:1048617/100‑1 (MQ=255) ctctTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGtt < 1:91805/100‑1 (MQ=255) tttttGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGc < 1:3877444/100‑1 (MQ=255) ttttGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGc < 1:703322/99‑1 (MQ=255) ttttGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCg < 1:3688773/100‑1 (MQ=255) cgtcgccTGGCGATTGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCgg > 1:1296768/6‑100 (MQ=255) ttGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGGGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGc < 1:3459212/100‑1 (MQ=255) gCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGctc > 1:3728176/1‑100 (MQ=255) cccTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGctct > 2:3725078/1‑100 (MQ=255) cccTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGctct > 2:964037/1‑100 (MQ=255) cccTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGctct > 1:2004014/1‑100 (MQ=255) ccTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCtt > 2:4215766/1‑100 (MQ=255) ccTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCtt > 1:462041/1‑100 (MQ=255) cTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGCCCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTc < 1:320460/100‑1 (MQ=255) cTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTc > 2:1840874/1‑100 (MQ=255) tGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCa > 2:3530967/1‑100 (MQ=255) ggCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCaa > 2:3407654/1‑100 (MQ=255) ggCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCa < 1:3806823/99‑1 (MQ=255) gCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAAc < 2:1685900/100‑1 (MQ=255) cAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACg < 1:3180976/100‑1 (MQ=255) cAATCGCCAGGCGACGCGCTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACGGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCaa > 1:3524530/1‑98 (MQ=255) tCGCCAGGCGACGCGTTTGGTTAAGGTGCGAGCACTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTATTCAACGTTc > 1:2810114/1‑100 (MQ=255) cGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCg > 2:3433547/1‑100 (MQ=255) gCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGc < 2:3911664/100‑1 (MQ=255) gCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGc > 1:1334048/1‑100 (MQ=255) ccAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGcc < 1:4215744/100‑1 (MQ=255) ccAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGcc > 2:1571529/1‑100 (MQ=255) cAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCa > 2:2856353/1‑100 (MQ=255) ggCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGc < 2:789941/100‑1 (MQ=255) ggCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGc > 2:2439603/1‑100 (MQ=255) gCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCg < 2:4095306/100‑1 (MQ=255) aCGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGgat < 1:281391/100‑1 (MQ=255) tttGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATcc < 2:3755636/100‑1 (MQ=255) tGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATccgn < 1:669900/100‑2 (MQ=255) ggTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATccgcc > 2:92718/1‑100 (MQ=255) gTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATccgccg > 2:444206/1‑100 (MQ=255) gTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATccgccg < 1:784901/100‑1 (MQ=255) ttAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCcgccgc < 2:688261/100‑1 (MQ=255) tAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCgccgcc < 2:2366017/100‑1 (MQ=255) tAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATCATccgctggc < 1:1764189/100‑5 (MQ=255) aaGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCa < 2:1789771/100‑1 (MQ=255) ggTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCAt > 1:1504550/1‑99 (MQ=255) ggTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATg > 1:1504408/1‑100 (MQ=255) ggTGCGGGCGCTGTCTTCAATATTCACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTCGCGGCTCCTCACCGTTCGCCAGCGGATGATCCgccgccc > 1:1873289/1‑97 (MQ=255) tGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGAc > 1:1747485/1‑100 (MQ=255) gCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACa > 2:1000017/1‑100 (MQ=255) cGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACaa > 2:3244708/1‑100 (MQ=255) gggCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACaaa > 2:3016090/1‑100 (MQ=255) ggCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAg < 1:2706354/100‑1 (MQ=255) ggCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAg > 2:3203538/1‑100 (MQ=255) cgcTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAgcg < 1:1077505/100‑1 (MQ=255) cgcTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAgcg > 1:2558924/1‑100 (MQ=255) cgcTGGCTTCAAGATGGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAgcg < 1:3790743/100‑1 (MQ=255) cTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCAtt > 1:224942/1‑99 (MQ=255) cTTCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTg > 2:1196976/1‑100 (MQ=255) ttCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGc > 2:929992/1‑100 (MQ=255) tCAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCa > 2:2463451/1‑100 (MQ=255) tCAAGATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTGCGCCAGCGGATGATCCGCCGCCATGACAAGGCGCCATTGCa > 2:2326142/1‑100 (MQ=255) cAATATTGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGc > 2:851485/1‑98 (MQ=255) aaTATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCAcc > 2:359341/1‑100 (MQ=255) atTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGAt > 2:3352492/1‑100 (MQ=255) ttGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATc < 1:2152146/100‑1 (MQ=255) ttGACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATc < 1:3245429/100‑1 (MQ=255) tGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATcc < 1:2696912/100‑1 (MQ=255) tGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATcc > 1:2163380/1‑100 (MQ=255) gACCGCCGGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCt > 2:2080331/1‑100 (MQ=255) aCCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTa > 2:594371/1‑100 (MQ=255) ccgccgGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTaa > 1:244112/1‑100 (MQ=255) gccgGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCCGCGGCTGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTaatg > 1:165314/1‑98 (MQ=255) gccgGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAgg < 2:665793/100‑1 (MQ=255) gccgGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAgg > 1:2385569/1‑100 (MQ=255) gccgGAAAGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAgg > 1:2652756/1‑100 (MQ=255) ccgGAAAGGGCCGCAACTCCGCTTCTGTTAGCGGCTCTTCAACGTGCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAggg < 1:3341866/100‑1 (MQ=255) ccgGAAAGCGCCGCACCTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAgg < 1:3642409/99‑1 (MQ=255) ccgGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAggg < 1:509005/100‑1 (MQ=255) aaGCGCCGCAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCGGCCGCCATGACAACGCGCCATTGCACCGATCCTAAGGGATCaa > 1:2055697/1‑100 (MQ=255) aGCGCCACAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAg > 1:229686/1‑100 (MQ=255) cgccgcAACTGCGCTTCTGTTGGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGAc < 1:2916234/100‑1 (MQ=255) cgccgcAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGAc < 1:4164937/100‑1 (MQ=255) cgccgcAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGAc > 2:1215291/1‑100 (MQ=255) gccgcAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACt > 1:2096428/1‑100 (MQ=255) gccgcAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACt > 2:575345/1‑100 (MQ=255) gccgcAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACt > 2:2007168/1‑100 (MQ=255) gccgcAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGaat > 1:1795577/1‑98 (MQ=255) ccgcAACTGAGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTa < 2:1747490/100‑1 (MQ=255) cAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGTTGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAg < 1:2993463/100‑1 (MQ=255) cAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAg < 1:2746211/100‑1 (MQ=255) cAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAg < 2:3830562/100‑1 (MQ=255) aaCTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAgg < 1:835058/100‑1 (MQ=255) cTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGGTGATCCGCCGCCATGCCAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAgg > 1:1277030/1‑98 (MQ=255) cTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAGGTa < 1:1532351/100‑1 (MQ=255) gcgcTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCCCCGATCCTAAGGGATCAAGACTAAAGGTAtt > 1:4127896/1‑100 (MQ=255) | ACAATAATCTCTTTTTGCCCTGGCAATCGCCAGGCGACGCGTTTGGTTAAGGTGCGGGCGCTGTCTTCAATATTGACCGCCGGAAAGCGCCGCAACTGCGCTTCTGTTAGCGGCTCTTCAACGTTCGCCAGCGGATGATCCGCCGCCATGACAAAGCGCCATTGCACCGATCCTAAGGGATCAAGACTAAAGGTATT > NC_000913/531557‑531753 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |