| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,323,955 | T→G | 42.5% | N133T (AAC→ACC) | phnD ← | phosphonate ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,323,955 | 0 | T | G | 42.5% | 109.7 / 274.6 | 205 | N133T (AAC→ACC) | phnD | phosphonate ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base T (59/57); new base G (47/39); total (107/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
GCGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGGCGCG > NC_000913/4323856‑4324052 | gCGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgt < 2:2771467/100‑1 (MQ=255)gCGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgt > 2:1120060/1‑100 (MQ=255) cGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgtt > 2:2570609/1‑100 (MQ=255) cGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgtt > 2:243653/1‑100 (MQ=255) gAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgttg < 2:2477701/100‑1 (MQ=255) gAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGggtg > 2:4074047/1‑100 (MQ=255) aaGACGTAGTAGCCGGGGACGAGGACGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgttgt < 2:1070910/100‑1 (MQ=255) aGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgttgtt > 1:2769509/1‑100 (MQ=255) aGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGgttgtt < 1:2580128/100‑1 (MQ=255) gACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGggtgtt < 1:1901593/99‑1 (MQ=255) gACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGggtgt < 2:3900191/98‑1 (MQ=255) cGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGAt > 2:3459498/1‑100 (MQ=255) cGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGAt > 2:3156382/1‑100 (MQ=255) gtagtaGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATc > 2:642876/1‑100 (MQ=255) gtagtaGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATc < 1:2867665/100‑1 (MQ=255) tagCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGAc < 1:1239071/100‑1 (MQ=255) ccGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGt > 1:116351/1‑100 (MQ=255) cGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTc > 1:19284/1‑100 (MQ=255) cGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTc > 2:542141/1‑100 (MQ=255) ggggACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCt < 2:2495775/100‑1 (MQ=255) gACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTttg < 1:2032281/100‑1 (MQ=255) aCGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTttgt < 1:1774681/100‑1 (MQ=255) cGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTttgtt > 2:1896070/1‑100 (MQ=255) gAGGAAGCCAGAGGTGGAGTTATGCTCGCCAGTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTttgt < 1:3550529/98‑1 (MQ=255) gAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGGTCGTTCAGGGCGTTGATCGGACTGTCTttgttg < 1:2487122/100‑1 (MQ=255) gAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTttgttg < 2:1529670/100‑1 (MQ=255) ngAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGAc > 1:3745990/2‑100 (MQ=255) ggAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGAc < 2:4113878/100‑1 (MQ=255) ggAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGAc < 2:1097192/100‑1 (MQ=255) ggAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGAc > 2:2285436/1‑100 (MQ=255) ggAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGAc < 2:4167470/100‑1 (MQ=255) aaGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGa > 1:3785781/1‑100 (MQ=255) aGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGAt < 2:84556/100‑1 (MQ=255) aGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGAt < 1:2174974/100‑1 (MQ=255) gCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATc < 2:1342530/100‑1 (MQ=255) gCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATc < 2:3884506/100‑1 (MQ=255) ctagagGTCGAGTTACGATCGCCATTGCCAAAGTTGAGATCTTTCCGCTTCTCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGAt < 1:3968052/96‑1 (MQ=255) ccAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCa > 1:3476715/1‑100 (MQ=255) ccAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCa < 1:3075946/100‑1 (MQ=255) ccAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCa > 2:2351983/1‑100 (MQ=255) ccAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCa < 1:2096707/100‑1 (MQ=255) cAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCaa < 2:3115800/100‑1 (MQ=255) cAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCaa > 1:2420338/1‑100 (MQ=255) cAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCaa > 2:1064149/1‑100 (MQ=255) cAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCaa > 2:1202263/1‑100 (MQ=255) gagGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAaca < 2:1687894/100‑1 (MQ=255) agGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCTGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAacac < 1:2362533/100‑1 (MQ=255) agGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAacac < 1:1742585/100‑1 (MQ=255) ggTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACg > 1:2940405/1‑100 (MQ=255) ggTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACg > 2:1247874/1‑100 (MQ=255) gAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCGACACGCTcc < 2:1301386/100‑1 (MQ=255) aGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCa > 2:3202373/1‑100 (MQ=255) aGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCa > 2:604582/1‑100 (MQ=255) aGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCa > 2:235299/1‑100 (MQ=255) aGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCa > 2:1366231/1‑100 (MQ=255) aGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTcc < 1:602653/99‑1 (MQ=255) gTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAg < 2:3567751/100‑1 (MQ=255) tAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTa > 2:3072627/1‑100 (MQ=255) aGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCACCAAGCTCCAGaaa > 2:3388133/1‑100 (MQ=255) gATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAAcc < 1:4081376/100‑1 (MQ=255) aTCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAAccc > 2:1608982/1‑100 (MQ=255) cATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGa > 2:3288680/1‑100 (MQ=255) cATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTCACGATCAACACGCTCCAGTAACCCGGCg < 1:336342/99‑1 (MQ=255) atctcAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatc < 2:2839428/96‑1 (MQ=255) gCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTTATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTACCCCGGCGatcca > 1:324186/1‑100 (MQ=255) gCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatcca > 1:2679354/1‑100 (MQ=255) gCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatcca > 2:4023347/1‑100 (MQ=255) gCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatcca > 1:1221599/1‑100 (MQ=255) cAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatccatc > 2:744606/1‑100 (MQ=255) cAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatcagat > 1:2839417/1‑96 (MQ=255) cAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatccatc > 2:3938234/1‑100 (MQ=255) cAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGatccatc > 1:1261645/1‑100 (MQ=255) aaGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATccg < 1:579587/100‑1 (MQ=255) gTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTGGTTGAGGGGACTGTCTTTGTTGACGATCAACATGGTCCAGTAACCAGGCGATCCATccgccg > 1:2293813/1‑100 (MQ=255) tGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCcgccgc < 1:544721/100‑1 (MQ=255) gaTCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGAc < 1:1026364/100‑1 (MQ=255) cTTTCCGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGt > 1:14449/1‑100 (MQ=255) tttCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTc < 1:1881848/100‑1 (MQ=255) ttCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCt < 1:795002/100‑1 (MQ=255) ccGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTgg > 2:2917174/1‑100 (MQ=255) cGCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTggg < 1:2351977/100‑1 (MQ=255) gCTTCGCCAGCAGATCGTTCAGGGTGTTGATCGGACTGCCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGGCGCGACCGTCTGGGc > 1:2638307/1‑100 (MQ=255) agcggaaagATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAg < 2:2979637/93‑1 (MQ=255) gCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGa > 2:157290/1‑100 (MQ=255) gCCAGCAGATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGa > 2:1268174/1‑100 (MQ=255) cagcagATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGAcc < 2:2050950/100‑1 (MQ=255) gcagATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTg < 2:2225591/100‑1 (MQ=255) cagATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTgg > 1:1498743/1‑100 (MQ=255) agATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGc > 2:2784992/1‑100 (MQ=255) gATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGcc > 2:3869128/1‑100 (MQ=255) gATCGTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGcc > 1:3284220/1‑100 (MQ=255) gTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTg > 1:3156051/1‑100 (MQ=255) gTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTg > 1:1526073/1‑100 (MQ=255) gTTCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTg > 2:3563744/1‑100 (MQ=255) ttCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTgg < 1:3302127/100‑1 (MQ=255) tCAGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGgc > 2:2123678/1‑100 (MQ=255) aGGTTGTTGATCGGACCGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGgcgc < 2:3659367/100‑1 (MQ=255) aGGGTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGgcgc < 1:4166165/100‑1 (MQ=255) ggTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGGcgcg > 2:221251/1‑100 (MQ=255) ggTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGGcgcg < 2:3809411/100‑1 (MQ=255) | GCGAAGACGTAGTAGCCGGGGACGAGGAAGCCAGAGGTGGAGTTAGGATCGCCATTGCCAAAGGTGAGATCTTTCCGCTTCGCCAGCAGATCGTTCAGGTTGTTGATCGGACTGTCTTTGTTGACGATCAACACGCTCCAGTAACCCGGCGATCCATCCGCCGCGACCGTCTGGGCGAAGACCTGGCCATTGGCGCG > NC_000913/4323856‑4324052 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |