BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_000913	772,209	C→A	100%	T251N (ACC→AAC)	cydA →	cytochrome d terminal oxidase, subunit I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	772,209	0	C	A	100.0%	537.3 / ‑6.7	161	T251N (ACC→AAC)	cydA	cytochrome d terminal oxidase, subunit I
Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (88/72); minor base G (0/1); total (88/73)

Only 100 of 162 total aligned reads displayed.

CTTTGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAACCAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACA  >  NC_000913/772114‑772304

cTTTGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACaaa                                                                                             <  1:2711293/100‑1 (MQ=255)

  ttGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACaa                                                                                              <  1:2001302/97‑1 (MQ=255)

          gCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATGGTTCTGGGTGATGAAGCCGGCTACGAAATGGGCGACGTGCAGAAAAAGAAACTGggtgct                                                                                    >  1:3298002/1‑99 (MQ=255)

           cTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTAt                                                                                  <  1:3199535/100‑1 (MQ=255)

            tGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGTTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTAtt                                                                                 <  1:3649119/100‑1 (MQ=255)

              ccAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGa                                                                               <  1:68207/100‑1 (MQ=255)

               cAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGaa                                                                              >  1:1995805/1‑100 (MQ=255)

               cAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGaa                                                                              >  1:3063362/1‑100 (MQ=255)

               cAGCGTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGaa                                                                              <  1:1036021/100‑1 (MQ=255)

                aGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAg                                                                             <  2:1564379/100‑1 (MQ=255)

                 gCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGc                                                                            >  1:208290/1‑100 (MQ=255)

                  cTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGcc                                                                           >  2:2656522/1‑100 (MQ=255)

                  cTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGcc                                                                           >  1:1509063/1‑100 (MQ=255)

                  cTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGcc                                                                           >  1:939716/1‑100 (MQ=255)

                   ttCGGTGTTGCTGTTGTTCGTTCTTTTATTGTTTTGGTTGAAGAACCCGCCTACGAAATGGGCGACGTGCAGAATAACAAACTGTCTGCTATTg                                                                                <  1:3367786/94‑1 (MQ=255)

                   ttCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCg                                                                          <  1:3173961/100‑1 (MQ=255)

                   ttCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCg                                                                          >  1:1789788/1‑100 (MQ=255)

                   ttCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCg                                                                          >  2:2449771/1‑100 (MQ=255)

                   ttCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCg                                                                          >  2:448044/1‑100 (MQ=255)

                     cGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAg                                                                        <  1:2573725/100‑1 (MQ=255)

                     cGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTACAGAAAAACAAACTGGCTGCTATTGAAGCCGAg                                                                        >  1:2844766/1‑100 (MQ=255)

                      ggTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGt                                                                       >  1:1132019/1‑100 (MQ=255)

                      ggTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGt                                                                       >  1:1257091/1‑100 (MQ=255)

                      ggTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGt                                                                       >  2:2970705/1‑100 (MQ=255)

                       gTATTGCGGCTGTTCGGTCTGTAATTGTTCTAGGTGATAAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGaa                                                                              <  1:3568884/92‑1 (MQ=255)

                        tATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTgg                                                                     >  2:1999313/1‑100 (MQ=255)

                        tATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTgg                                                                     >  2:1784748/1‑100 (MQ=255)

                        tATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTgg                                                                     <  2:1572739/100‑1 (MQ=255)

                        tATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTgg                                                                     <  1:3030292/100‑1 (MQ=255)

                          tGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGa                                                                   >  1:2700489/1‑100 (MQ=255)

                           ggCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGaa                                                                  <  1:3009325/100‑1 (MQ=255)

                             ctgctgTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAAc                                                                >  2:48496/1‑100 (MQ=255)

                              tgctgTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACg                                                               <  2:1150760/100‑1 (MQ=255)

                              tgctgGTCTGTCTGTTAGTGTTCTGGGTGATGAATCCGGCTACGAAAGGGGCGACGTGCAGAAAAACAACCTGGCTGCTATTGAAGCCGAGTGGGAAAc                                                                <  1:3725246/99‑1 (MQ=255)

                                ctgTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCa                                                             <  2:1007854/100‑1 (MQ=255)

                                 tgTTTTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTTGCTGCTATTGAAGCCGAGTGGGAAACGCaa                                                            <  1:3055610/100‑1 (MQ=255)

                                     ctgtctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTg                                                        >  2:1321640/1‑100 (MQ=255)

                                      tgtctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTTTTATTGAAGCCGAGTGGGAAACGCAACCTgc                                                       <  1:2312517/100‑1 (MQ=255)

                                      tgtctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTgc                                                       >  2:2941405/1‑100 (MQ=255)

                                       gtctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTgcg                                                      >  2:3771509/1‑100 (MQ=255)

                                         ctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACCAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTgcg                                                      <  1:2338924/98‑1 (MQ=255)

                                         ctgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGGGTGGGAAACGCAACCTGCGcc                                                    >  2:2094936/1‑100 (MQ=255)

                                         ctgtTAGTGTTCTGGGCGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACACACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGcc                                                    <  1:617227/100‑1 (MQ=255)

                                          tgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCGACCTGCGCct                                                   >  1:2797387/1‑100 (MQ=255)

                                          tgtTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCct                                                   >  2:3984691/1‑100 (MQ=255)

                                            ttATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCctgc                                                 <  2:3336343/100‑1 (MQ=255)

                                            ttATTGTTCTGGGTGAAGAATCCGTCTACGATATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCctgc                                                 <  1:2941082/100‑1 (MQ=255)

                                              aTTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCctgctg                                               >  2:3471986/1‑100 (MQ=255)

                                              aTTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCctgctg                                               >  2:2780167/1‑100 (MQ=255)

                                                tGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCtgctgc                                              >  1:1662490/1‑99 (MQ=255)

                                                tGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGcc                                             >  2:1952723/1‑100 (MQ=255)

                                                 gTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCt                                            <  1:3811114/100‑1 (MQ=255)

                                                 gTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCt                                            >  2:244059/1‑100 (MQ=255)

                                                 gTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCt                                            >  2:1482102/1‑100 (MQ=255)

                                                   tCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCttt                                          >  1:2075856/1‑100 (MQ=255)

                                                       tgTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActc                                      <  2:1715481/99‑1 (MQ=255)

                                                       ggTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAACCTGGCTGCTATTGAAGCCGCGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActc                                      <  1:1421109/100‑1 (MQ=255)

                                                        gTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActct                                     >  1:3939039/1‑100 (MQ=255)

                                                        gTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActca                                     >  1:3878774/1‑99 (MQ=255)

                                                        gTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActca                                     >  1:1715476/1‑99 (MQ=255)

                                                         tgatgaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTActc                                      <  1:666749/98‑1 (MQ=255)

                                                          gatgaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGt                                   >  2:1933947/1‑100 (MQ=255)

                                                           atgaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGtt                                  >  1:297694/1‑100 (MQ=255)

                                                            tgaCTCCGGCTACGAAATGGGCGACGTGCAGATAAACAAACTGGCTGCTATTGAACCCGAGTGGGAAACGCAACCCGCGCCGGCTGCCTTTACTCTGTTc                                 <  1:901653/100‑1 (MQ=255)

                                                            tgaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTc                                 <  1:3930228/100‑1 (MQ=255)

                                                            tgaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTc                                 <  1:1319832/100‑1 (MQ=255)

                                                             gaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCg                                >  2:1797502/1‑100 (MQ=255)

                                                             gaATCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCg                                <  2:3120306/100‑1 (MQ=255)

                                                              aaTCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCgg                               <  2:1200575/100‑1 (MQ=255)

                                                               aTCCGGCTACGAAATGGGCGACGTGCAGAAAAGCAAACTAGCCGCTATTGAAGCCGAGTGCCAACCGCAACCTGCGCCTGGTGCTTTTACTCTGTTCGGc                              <  1:2651563/100‑1 (MQ=255)

                                                                tCCGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCa                             <  1:437450/100‑1 (MQ=255)

                                                                  cGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCAtt                           >  1:2197891/1‑100 (MQ=255)

                                                                  cGGCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCAtt                           <  2:3677758/100‑1 (MQ=255)

                                                                    gCTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTcc                         <  2:3159506/100‑1 (MQ=255)

                                                                     cTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTcc                         <  2:761112/99‑1 (MQ=255)

                                                                     cTACGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCt                        >  2:736575/1‑100 (MQ=255)

                                                                       aCGAAATGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGa                      <  1:48496/100‑1 (MQ=255)

                                                                        cGAAATGGGCGACGTGAAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCACCCTGCGACTCCTGCCTTTACTCTGTTCGGCATTCCTCAt                     >  1:1657210/1‑100 (MQ=255)

                                                                          aaaTGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCa                   <  1:1588030/100‑1 (MQ=255)

                                                                          aaaTGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCATGCTGCCTTTACTCTGTTCGGCATTACTGATCa                   >  1:3417155/1‑100 (MQ=255)

                                                                            aTGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAgg                 >  2:3533041/1‑100 (MQ=255)

                                                                             tGGGCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGa                >  2:318047/1‑100 (MQ=255)

                                                                              gggCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGaa               >  2:1075723/1‑100 (MQ=255)

                                                                               ggCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAag              <  2:2319033/100‑1 (MQ=255)

                                                                               ggCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAag              >  2:3958521/1‑100 (MQ=255)

                                                                               ggCGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAag              >  1:3471918/1‑100 (MQ=255)

                                                                                 cGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAagag            <  2:812615/100‑1 (MQ=255)

                                                                                 cGACGTGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAagag            <  2:2286366/100‑1 (MQ=255)

                                                                                      tGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGAc       <  2:3675527/100‑1 (MQ=255)

                                                                                      tGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGAc       >  1:1721602/1‑100 (MQ=255)

                                                                                      tGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGAc       >  2:541774/1‑100 (MQ=255)

                                                                                      tGCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCGTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGAc       <  1:2275689/100‑1 (MQ=255)

                                                                                       gCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCCGGAAGAGGAGACg      >  2:4205965/1‑100 (MQ=255)

                                                                                       gCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACg      >  1:3398216/1‑100 (MQ=255)

                                                                                       gCAGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACg      <  1:1933943/100‑1 (MQ=255)

                                                                                         aGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGaa    <  2:2723359/100‑1 (MQ=255)

                                                                                         aGAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGaa    >  2:2830441/1‑100 (MQ=255)

                                                                                          gAAAAACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAAc   >  2:663706/1‑100 (MQ=255)

                                                                                           aaaaACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACa  <  2:2621447/100‑1 (MQ=255)

                                                                                           aaaaACAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACa  <  2:777787/100‑1 (MQ=255)

CTTTGCTATCGCTGCCAGCTTCGGTATGGCTGCTGTTCTGTCTGTTATTGTTCTGGGTGATGAATCCGGCTACGAAATGGGCGACGTGCAGAAAACCAAACTGGCTGCTATTGAAGCCGAGTGGGAAACGCAACCTGCGCCTGCTGCCTTTACTCTGTTCGGCATTCCTGATCAGGAAGAGGAGACGAACA  >  NC_000913/772114‑772304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`