| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 963,971 | C→A | 43.0% | F48L (TTC→TTA) | ihfB → | integration host factor (IHF), DNA‑binding protein, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 963,971 | 0 | C | A | 43.0% | 84.8 / 199.4 | 151 | F48L (TTC→TTA) | ihfB | integration host factor (IHF), DNA‑binding protein, beta subunit |
| Reads supporting (aligned to +/- strand): ref base C (36/50); new base A (37/28); total (73/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.28e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.79e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
CACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAA > NC_000913/963873‑964070 | cacaTTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCg < 2:1100854/100‑1 (MQ=255)cacaTTCCCGCCAAGACGGTTGAAGAGGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCg < 2:3671251/100‑1 (MQ=255) acaTTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCgg < 1:3981681/100‑1 (MQ=255) caTTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGc > 1:1677737/1‑100 (MQ=255) cccGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGtt < 2:3691102/100‑1 (MQ=255) cGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTtc > 1:1876319/1‑100 (MQ=255) cGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGAGTATTGAAATCCGCGGTTTAGGCAGttt > 1:1876494/1‑99 (MQ=255) cAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTctct > 2:510742/1‑100 (MQ=255) aaGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCtt < 1:4013482/100‑1 (MQ=255) aGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCttt < 2:386729/100‑1 (MQ=255) aCGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGc < 2:1338911/100‑1 (MQ=255) aCGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGc < 1:2476057/100‑1 (MQ=255) cGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTg < 2:126531/98‑1 (MQ=255) cGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGAGCAGGGCGAGCGTATTGAAATCAGCGGTTTCGGCAGTTTCTCTTTGCa > 1:2837123/1‑100 (MQ=255) ggTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCAc > 1:146166/1‑100 (MQ=255) gTTGAAGATGCAGTAAAAGAGCTGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCAc > 2:2696987/1‑99 (MQ=255) gTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACt > 1:2657549/1‑100 (MQ=255) tGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTAc > 2:1771567/1‑100 (MQ=255) tGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTAc > 1:2551015/1‑100 (MQ=255) gAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTAcc > 2:2257087/1‑100 (MQ=255) gAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACGCCTGCGCAGGGCGAGCGCATTGAACTCAGCGGCTTAGGCCGCTTCCCTTCACACTAcc > 1:3839777/1‑100 (MQ=255) aaGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACcg > 2:1835772/1‑100 (MQ=255) aGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACcgc < 2:133811/100‑1 (MQ=255) gATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACcgcg > 2:3318421/1‑100 (MQ=255) gATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACcgcg > 2:2074872/1‑100 (MQ=255) aTGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCgcgc < 1:2403000/100‑1 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACcgcg > 1:3275301/1‑98 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCgcgc > 1:4114229/1‑99 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGca > 1:340825/1‑100 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGca < 2:2360632/100‑1 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGca > 2:3903485/1‑100 (MQ=255) tGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACCACCGCGca > 2:3087391/1‑100 (MQ=255) gCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGcac < 1:2829682/100‑1 (MQ=255) cAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGCAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACAGCGcacc > 1:3386656/1‑100 (MQ=255) cAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGcacc > 2:51325/1‑100 (MQ=255) cAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGcacc > 2:917949/1‑100 (MQ=255) aGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGcacca > 2:1199306/1‑100 (MQ=255) tAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACg > 2:1866013/1‑100 (MQ=255) aaaaGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGt < 2:498466/100‑1 (MQ=255) aaaGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTa > 1:1528988/1‑100 (MQ=255) gagaTGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTAcc < 2:1705610/99‑1 (MQ=255) gagaTGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCg > 2:3989025/1‑100 (MQ=255) agaTGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTAcccg > 2:3363188/1‑98 (MQ=255) aTGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGAc < 2:1541800/100‑1 (MQ=255) tGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACg < 2:2759207/100‑1 (MQ=255) tGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACg > 2:1557659/1‑100 (MQ=255) tGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACg > 2:1469186/1‑100 (MQ=255) tGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACg > 2:3974325/1‑100 (MQ=255) gCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGt > 1:1037999/1‑100 (MQ=255) gCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGt < 1:95646/100‑1 (MQ=255) cTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTa < 2:4131610/100‑1 (MQ=255) tGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTaa > 1:2502512/1‑100 (MQ=255) tGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTaa > 1:2905845/1‑100 (MQ=255) ggAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAAt > 2:3433799/1‑100 (MQ=255) atatGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGaa < 1:989283/100‑1 (MQ=255) atatGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTCTCTCTTTGCACTACCGCGCACCACGTACTGGACGTAATccta < 2:2895021/99‑3 (MQ=255) tatGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAg < 2:121647/100‑1 (MQ=255) tatGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAg > 1:4169554/1‑100 (MQ=255) tatGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAg > 2:621044/1‑100 (MQ=255) tGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGAc > 2:641979/1‑100 (MQ=255) ggCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACt < 1:1670549/100‑1 (MQ=255) gCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACt < 1:2696977/99‑1 (MQ=255) ccTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTgg < 1:1434361/100‑1 (MQ=255) cTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGc < 2:3778576/100‑1 (MQ=255) cTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGc > 1:1311102/1‑100 (MQ=255) ctTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAg < 2:2954831/100‑1 (MQ=255) ctTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAg > 1:904811/1‑100 (MQ=255) ttGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGt < 2:2657558/100‑1 (MQ=255) gcgcAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAg > 1:43328/1‑100 (MQ=255) gcgcAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAg < 1:4216906/100‑1 (MQ=255) gcgcAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAg > 2:2568839/1‑100 (MQ=255) cgcAGGGCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGa > 2:1052603/1‑100 (MQ=255) cAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAAc > 2:2123296/1‑100 (MQ=255) cAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAAc < 1:2123291/100‑1 (MQ=255) gggCGAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTg > 1:2305018/1‑100 (MQ=255) ggCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTgg < 1:477156/100‑1 (MQ=255) gCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTgga < 2:1893551/100‑1 (MQ=255) gAGCGTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTggaag < 1:1306977/100‑1 (MQ=255) aGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTggaagg < 1:802032/100‑1 (MQ=255) gTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGaaa > 2:2378724/1‑100 (MQ=255) gTATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGaaa < 1:726318/100‑1 (MQ=255) tATTGAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGaaaa > 1:139148/1‑100 (MQ=255) aTTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAAt > 1:1844102/1‑100 (MQ=255) gAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACg > 2:2110942/1‑100 (MQ=255) gAAATCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACg > 2:1430422/1‑100 (MQ=255) aaaTCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGt < 1:1780755/100‑1 (MQ=255) aaTCCGCGGTTTAGGCAGTTTCTCTTTGCAATACCGCGCACCACGTACCGGACGTAATACGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGtt > 1:2018722/1‑100 (MQ=255) aTCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTc < 2:1144/100‑1 (MQ=255) tCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTcc < 1:2463676/100‑1 (MQ=255) tCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTcc < 2:2265956/100‑1 (MQ=255) tCCGCGGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTcc < 1:4224578/100‑1 (MQ=255) cgcgGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTc < 2:1038002/100‑1 (MQ=255) cgcgGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTc < 2:3791862/100‑1 (MQ=255) cgGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCGGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCAc > 1:2873184/1‑100 (MQ=255) cgGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCAc < 1:1012525/100‑1 (MQ=255) cgGTTTAGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCAc < 2:1170430/100‑1 (MQ=255) gTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACtt < 2:324811/100‑1 (MQ=255) ttCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATCAAGTAGCACTGGAACGAAAATACGTTCCTCACTTTa > 1:2395091/1‑100 (MQ=255) tCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTaa < 2:172453/100‑1 (MQ=255) cGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTaaa > 1:301343/1‑100 (MQ=255) | CACATTCCCGCCAAGACGGTTGAAGATGCAGTAAAAGAGATGCTGGAGCATATGGCCTCGACTCTTGCGCAGGGCGAGCGTATTGAAATCCGCGGTTTCGGCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAA > NC_000913/963873‑964070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |