| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,087,715 | C→T | 46.9% | M44I (ATG→ATA) | pgaC ← | biofilm PGA synthase PgaCD, catalytic subunit; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,087,715 | 0 | C | T | 46.9% | 38.7 / 167.5 | 132 | M44I (ATG→ATA) | pgaC | biofilm PGA synthase PgaCD, catalytic subunit; poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine synthase |
| Reads supporting (aligned to +/- strand): ref base C (39/31); new base T (36/26); total (75/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGTATGCATAACACCAGAC > NC_000913/1087618‑1087812 | aGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCAtata < 1:341796/100‑1 (MQ=255) gACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATaa > 2:1962454/1‑100 (MQ=255) ggATTATCTTTCAACTGGGGAGCGGGTGCGTTTGCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATg < 1:1063611/99‑1 (MQ=255) gATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGa < 2:2015793/100‑1 (MQ=255) gATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGa < 1:1111482/100‑1 (MQ=255) aTTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGAc < 2:265941/100‑1 (MQ=255) ttATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGAc > 1:172631/1‑99 (MQ=255) ttATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCAATCCCAGTGGCGTTCATGATAGACCCAGAACTAGACGCCGCCGACAATCCATATAATGGGCa > 1:1033243/1‑100 (MQ=255) tATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACAt > 2:379039/1‑100 (MQ=255) cTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaa > 2:577904/1‑100 (MQ=255) cTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaa > 2:1382281/1‑100 (MQ=255) tCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGACCAGTGGCATTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATaaaaaa < 2:2768961/100‑1 (MQ=255) cAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAAc > 2:3094714/1‑100 (MQ=255) aaCTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACg < 1:1600132/100‑1 (MQ=255) aCTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACgg < 2:2955135/100‑1 (MQ=255) cTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGc > 1:2865661/1‑100 (MQ=255) tGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGcc < 2:952884/100‑1 (MQ=255) tGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGcc < 2:190968/100‑1 (MQ=255) ggggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCa < 2:2669960/100‑1 (MQ=255) ggggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCa > 1:3291530/1‑100 (MQ=255) ggggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCa < 1:4265299/100‑1 (MQ=255) ggggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCAACATACTGGACATAAAAAACGGcc > 1:1892400/1‑99 (MQ=255) gggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCag > 1:3835419/1‑100 (MQ=255) gggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCag > 1:1470526/1‑100 (MQ=255) gggAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCag < 1:1167078/100‑1 (MQ=255) gggAGCTGGTGCGTTTGCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACgg < 1:2447714/96‑1 (MQ=255) aGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCagaag < 2:1470530/100‑1 (MQ=255) aGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaag > 2:1398506/1‑100 (MQ=255) gCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga < 2:4135838/100‑1 (MQ=255) gCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCagaaga < 2:4136043/100‑1 (MQ=255) tGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGaaa > 2:4044949/1‑100 (MQ=255) tGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGaaa > 2:2534747/1‑100 (MQ=255) tGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGaaa > 2:505574/1‑100 (MQ=255) ggTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGaaaa > 2:2314034/1‑100 (MQ=255) ggTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGaaaa > 2:31639/1‑100 (MQ=255) gTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAAc < 1:294453/100‑1 (MQ=255) gTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAAc > 1:47861/1‑100 (MQ=255) gTGCGTTTTCTCCCAACGGCCAGTAGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAAACCACATAATGGACATAAAAAACGGCCAGAAGAAAAc < 1:2430043/100‑1 (MQ=255) gTGCGTTTTCCCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAAc < 2:753907/100‑1 (MQ=255) tGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACACAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACg > 1:3534096/1‑100 (MQ=255) tGCGTATGCTCCCCACGGCCAGTGGCGTTCACGATAGAACCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACg < 1:2442358/100‑1 (MQ=255) gCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGa > 1:647575/1‑100 (MQ=255) gCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGa > 1:1511162/1‑100 (MQ=255) cGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGaa < 2:2391881/100‑1 (MQ=255) cGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGaa < 2:393310/100‑1 (MQ=255) gTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAAc > 2:346422/1‑100 (MQ=255) gTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAAc > 1:2006327/1‑100 (MQ=255) ttCTCCCCACGGCCAGTGGCGTTCGCGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtc < 1:495696/100‑1 (MQ=255) ctcCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcat < 1:1975948/100‑1 (MQ=255) ccccACGGCCAGTGGCGTTCACGATAGACCCAGAAATGGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatca > 1:2269847/1‑100 (MQ=255) ccccACGGCCAGTGGCGTTCACGATAGACCCAGAAATCGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatca > 1:2276494/1‑100 (MQ=255) ccccACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatca > 1:2627958/1‑100 (MQ=255) cccACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat > 2:79730/1‑100 (MQ=255) cccACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat > 2:3795528/1‑100 (MQ=255) cccACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcat > 2:2437540/1‑100 (MQ=255) ccACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCtcatcatc < 2:2079843/100‑1 (MQ=255) ccAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCa < 1:1684113/100‑1 (MQ=255) cAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAc > 1:1144368/1‑100 (MQ=255) cAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAc < 2:875523/100‑1 (MQ=255) aGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAcc < 2:269755/100‑1 (MQ=255) aGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAcc > 1:320773/1‑100 (MQ=255) aGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCAcc < 1:344443/100‑1 (MQ=255) gTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCa > 1:1838333/1‑100 (MQ=255) tgcACGATAGACCTAGAAATAGACGCCGCCAGCAATCCACATGATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGa > 2:2887993/3‑100 (MQ=255) cACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaaa < 1:2174089/100‑1 (MQ=255) cACGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaaa > 1:4204222/1‑100 (MQ=255) cACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGaaa > 2:823115/1‑100 (MQ=255) aCGATAGACCCAGAAATAGACGCCGCCAACAATCCACAAAAAAAAAAAAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAg < 1:31639/100‑1 (MQ=255) cGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt > 1:2390001/1‑100 (MQ=255) cGATAGACCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGt < 2:1205166/100‑1 (MQ=255) gATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGta > 2:3555174/1‑100 (MQ=255) aTAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCTGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtac > 1:2730383/1‑100 (MQ=255) tAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacg < 2:2314931/100‑1 (MQ=255) gACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgct < 2:2964186/100‑1 (MQ=255) gACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgct > 2:3347832/1‑100 (MQ=255) gACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGAGAAAGtacgct > 1:2867851/1‑100 (MQ=255) aCCCAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgcta > 1:1330380/1‑100 (MQ=255) cccAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgctac > 1:4178234/1‑100 (MQ=255) cccAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgctac > 1:2587863/1‑100 (MQ=255) cccAGAAATAGACGCCGCCAACAATCCATATAATGGACATAAAAAACCGCCAGAAGAAACCGAAACTCATCATCAGTTCACCAGCGTGAACGtac > 1:1746095/1‑95 (MQ=255) cccAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgctac > 1:388956/1‑100 (MQ=255) cccAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgctac < 2:1912395/100‑1 (MQ=255) aaaaaTAGACGCCGCCAACAATCCACATAATGAACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCa < 1:357906/98‑1 (MQ=255) aGAAATAGACGCCGCCAACAATCCACATAATGGACATATAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGtacgctacgc < 1:3959584/99‑1 (MQ=255) aGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCa < 1:1398502/100‑1 (MQ=255) aaTAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑g > 2:3705383/1‑100 (MQ=255) tAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑ggg < 1:917014/100‑1 (MQ=255) tAGACGCCGCAAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑ggg < 2:294228/100‑1 (MQ=255) aGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑gggg > 2:1613150/1‑100 (MQ=255) gACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑ggggg > 2:621582/1‑99 (MQ=255) gACGCCGCCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑ggggg < 2:2813719/100‑2 (MQ=255) gACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGt > 1:1874086/1‑100 (MQ=255) gACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGt < 2:1421346/100‑1 (MQ=255) cgccgcCAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑gggggta > 2:1747128/1‑97 (MQ=255) cgccAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGTATGCa > 2:2338504/1‑100 (MQ=255) gccAACAATCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGGTATGCa < 2:3914014/100‑1 (MQ=255) caacaaTCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGGTATGCATa > 2:327646/1‑100 (MQ=255) caacaaTCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGTATGCATaa > 1:4227160/1‑100 (MQ=255) acaaTCCATATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATAGGGGGTATGCATAac > 1:3426382/1‑100 (MQ=255) acaaTCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGTATGCATAaca > 1:1455610/1‑100 (MQ=255) | TAGACGGATTATCTTTCAACTGGGGAGCTGGTGCGTTTTCTCCCCACGGCCAGTGGCGTTCACGATAGACCCAGAAATAGACGCCGCCAACAATCCACATAATGGACATAAAAAACGGCCAGAAGAAAACGAACCTCATCATCAGTTCACCAGAGTGAAAGTACGCTACGCATA‑GGGGTATGCATAACACCAGAC > NC_000913/1087618‑1087812 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |