| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,193,289 | T→A | 54.8% | Q162L (CAG→CTG) | mnmA ← | tRNA(Gln,Lys,Glu) U34 2‑thiouridylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,193,289 | 0 | T | A | 54.8% | 33.9 / 215.8 | 155 | Q162L (CAG→CTG) | mnmA | tRNA(Gln,Lys,Glu) U34 2‑thiouridylase |
| Reads supporting (aligned to +/- strand): ref base T (29/41); new base A (40/45); total (69/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.51e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
GTCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACG > NC_000913/1193192‑1193387 | gTCTTTTTTCTTCGCGGTGACCAGCCCAAGATCTTCAGCACTCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTg < 1:424098/99‑1 (MQ=255)gTCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGc < 1:3803569/100‑1 (MQ=255) tCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCt < 1:2721489/100‑1 (MQ=255) cTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTc > 1:1605146/1‑100 (MQ=255) ttcttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGc < 1:2425408/100‑1 (MQ=255) ttcttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGc < 1:3253053/100‑1 (MQ=255) ttcttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGc < 2:734210/100‑1 (MQ=255) tcttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCt > 2:259816/1‑100 (MQ=255) ttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTGCAGTTCGCCGACCGGGAACAGGCTTTGAGCAATCAGCTCATGGCTGa > 1:3878664/1‑100 (MQ=255) ttcGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGa > 2:679797/1‑100 (MQ=255) gcgGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTGCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCg < 1:665937/100‑1 (MQ=255) tGACCAGACCAAGATCTTCAGCAATCTTACGCTCCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGTAATCAGCTCATGGCTGAGCGtata < 1:438200/100‑1 (MQ=255) tGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGtata < 2:2319200/100‑1 (MQ=255) tGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGtata < 2:3892812/100‑1 (MQ=255) gaccagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATaa > 2:4042146/1‑100 (MQ=255) accagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGGGTATaaa < 2:2240133/100‑1 (MQ=255) ccagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAg < 1:2969013/100‑1 (MQ=255) ccagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTAGAAAg > 1:2664332/1‑100 (MQ=255) cagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATaaa < 1:745060/98‑1 (MQ=255) cagaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAgg > 1:1703318/1‑100 (MQ=255) agaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGa < 2:1353069/100‑1 (MQ=255) agaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGta < 1:3654332/93‑1 (MQ=255) agaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGa < 2:3553013/100‑1 (MQ=255) agaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGa < 1:397457/100‑1 (MQ=255) gaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTTTTTTTTTTTTTCCGGGAACAGGCTTTGCGCAATCATCTTATGGCTGAGCGTATAAAGGa > 1:3201831/1‑99 (MQ=255) gaccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGaa > 2:3980500/1‑100 (MQ=255) accaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAg < 2:2817538/100‑1 (MQ=255) accaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAg < 1:1884832/100‑1 (MQ=255) ccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGt > 2:3385823/1‑100 (MQ=255) ccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGt < 2:2421787/100‑1 (MQ=255) ccaAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCCACCGGGACCCGGCTTTGCGCAACCTGCTCCTCGCTGAGCGTATCAAGGaact > 1:3781023/1‑98 (MQ=255) caAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTa < 1:184447/100‑1 (MQ=255) aaGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAg > 2:505718/1‑100 (MQ=255) aGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGc < 1:909433/100‑1 (MQ=255) aGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGc < 1:1487910/100‑1 (MQ=255) aGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGAATAAAGGAAGTAGc > 2:3351160/1‑100 (MQ=255) gATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGct < 1:2358710/100‑1 (MQ=255) aTCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGctc < 1:1523024/100‑1 (MQ=255) aTCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGctc > 1:308232/1‑100 (MQ=255) tCTTTAGCAAGTTTACGCACGTGCGGTTTTTCGAGTTCGCCGACCGGGATCAGGCGTTGCGCTATCTGCTCATGGCTGAGCGCCTCAAGGAAGTa > 1:2916770/1‑95 (MQ=255) ttCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTgg < 2:1039434/100‑1 (MQ=255) cgCAATCTTACGCATCTGCGGCATTTCCAGTTCGCCGACCAGGAACAGACTTTGCGCAATCTGCTCATGACTGAGCGTATAAAGAAAGTAACTATGGTCt > 1:703416/2‑100 (MQ=255) gCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCtt > 2:3350855/1‑100 (MQ=255) gCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCtt > 2:2434296/1‑100 (MQ=255) aaTCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTa < 1:1104147/100‑1 (MQ=255) aTCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTAt < 2:1079205/100‑1 (MQ=255) aTCTTACACACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTAt > 1:3955890/1‑100 (MQ=255) ttACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGc < 1:2160103/100‑1 (MQ=255) tACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTgat > 2:2207885/1‑98 (MQ=255) cGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGt > 2:17039/1‑100 (MQ=255) cACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTcc < 2:633527/100‑1 (MQ=255) cACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTcc < 1:1100513/100‑1 (MQ=255) ccTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAg < 2:3791998/100‑1 (MQ=255) tGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGATCTGGTCTTTATTGCTGTCCAGAc > 1:2103152/1‑100 (MQ=255) ttttCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgca > 2:2088137/1‑100 (MQ=255) tttCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgcag > 2:214614/1‑100 (MQ=255) ttCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgcagc < 1:2394221/100‑1 (MQ=255) ttCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgcagc < 2:2083975/100‑1 (MQ=255) tCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgcagca > 2:3275604/1‑100 (MQ=255) tCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACgcagca > 2:2974397/1‑100 (MQ=255) tCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCGCATGGCTGAGCGTATAAAGGAAGTAGCGCTGGTCTTTATTGCTGTCCAGACCACgcag < 1:3982696/98‑1 (MQ=255) ccAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGcagcag < 1:3322515/100‑1 (MQ=255) aagtCGCCTACCGGGAACAGGCTTGGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggc < 2:785932/97‑1 (MQ=255) aGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggc < 1:2678587/100‑1 (MQ=255) aGTTCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggc < 1:434356/100‑1 (MQ=255) gTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggcg < 2:3514138/100‑1 (MQ=255) tCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggcggc > 2:700809/1‑100 (MQ=255) tCGCCGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggcgac < 2:2886532/100‑3 (MQ=255) ngCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGCGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAggcggc > 1:2522459/2‑99 (MQ=255) cGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGct > 2:2150396/1‑100 (MQ=255) cGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGct > 2:1763597/1‑100 (MQ=255) ccGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGctct > 2:585811/1‑100 (MQ=255) ccGACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGctct < 2:293567/100‑1 (MQ=255) gACCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTg > 1:1306120/1‑100 (MQ=255) aCCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGc < 2:3619745/100‑1 (MQ=255) aCCGGGAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCAGCTCTTGc < 1:1779148/100‑1 (MQ=255) gggAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCttagatc > 2:3634464/1‑95 (MQ=255) gggAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCAt > 2:4166048/1‑100 (MQ=255) ggAACAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATc < 1:3053546/100‑1 (MQ=255) gAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCg < 1:3655171/100‑1 (MQ=255) aCAGGCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGAc > 1:3299679/1‑100 (MQ=255) aCAGGCTTTGCGCAATCAGCCCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGAc < 2:2103156/100‑1 (MQ=255) cAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACa < 1:4204152/100‑1 (MQ=255) aGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGTAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACAt > 1:989167/1‑100 (MQ=255) ggCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATc > 1:2195042/1‑100 (MQ=255) ggCTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATc > 1:2853322/1‑100 (MQ=255) gCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCg > 1:1312452/1‑100 (MQ=255) cTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCgg > 2:3500936/1‑100 (MQ=255) cTTTGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCgg > 1:358820/1‑100 (MQ=255) tttGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGc < 2:237473/100‑1 (MQ=255) ttGCGCCATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGcc < 2:2421394/100‑1 (MQ=255) ttGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGcc < 2:4141554/100‑1 (MQ=255) ttGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGcc < 1:3885575/100‑1 (MQ=255) ttGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGcc > 2:1381995/1‑100 (MQ=255) tGCGCAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGccc > 2:390266/1‑100 (MQ=255) cgcAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGa > 2:3074055/1‑100 (MQ=255) gcAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGac > 2:2693002/1‑100 (MQ=255) gcAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGac > 1:4047909/1‑100 (MQ=255) cAATCAGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGcc > 1:4022884/1‑95 (MQ=255) tCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCAAGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGacgtac < 2:3863755/100‑1 (MQ=255) | GTCTTTTTTCTTCGCGGTGACCAGACCAAGATCTTCAGCAATCTTACGCACCTGCGGTTTTTCCAGTTCGCCGACCGGGAACAGGCTTTGCGCAATCTGCTCATGGCTGAGCGTATAAAGGAAGTAGCTCTGGTCTTTATTGCTGTCCAGACCACGCAGCAGGCGGCTCTTGCCATCGACATCGGCCCGACGTACG > NC_000913/1193192‑1193387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |