| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,282,840 | G→T | 53.5% | E993* (GAG→TAG) | narG → | nitrate reductase 1, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,282,840 | 0 | G | T | 53.5% | 15.7 / 197.6 | 131 | E993* (GAG→TAG) | narG | nitrate reductase 1, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (26/35); new base T (36/34); total (62/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCC > NC_000913/1282741‑1282938 | gCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACg < 1:3125883/100‑1 (MQ=255)gCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACg > 2:37731/1‑100 (MQ=255) aCCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCGGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACgag < 1:1882185/100‑1 (MQ=255) ccGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACtaga > 1:209064/1‑100 (MQ=255) ccGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACgaga < 2:2478922/100‑1 (MQ=255) cGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTTGTCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGagaa < 1:3613757/100‑1 (MQ=255) cGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTagaa < 1:669589/100‑1 (MQ=255) ggAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTagaag > 1:2902839/1‑100 (MQ=255) gAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGagaaga < 2:3852678/100‑1 (MQ=255) gAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGagaaga < 2:3455088/100‑1 (MQ=255) aCCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATcc < 1:437905/100‑1 (MQ=255) aCCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATcc < 2:602867/100‑1 (MQ=255) ccAACGGTCAGGTAGCCGTGAACGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATCCGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCg > 1:4261026/1‑100 (MQ=255) cAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGc > 2:187279/1‑100 (MQ=255) aaCGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCt < 2:2362129/100‑1 (MQ=255) aaCGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCt < 1:3859868/100‑1 (MQ=255) cGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTc > 2:2677603/1‑100 (MQ=255) ggTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTcc > 2:3838021/1‑100 (MQ=255) gTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAGTTTACCGGTCGTGACCACACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCcg > 1:1053234/1‑100 (MQ=255) cAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCcgcg > 2:1343975/1‑100 (MQ=255) cAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCcgcg < 1:2370922/100‑1 (MQ=255) cAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCcgcg < 2:1973273/100‑1 (MQ=255) ggTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGat > 2:4267515/1‑100 (MQ=255) ggTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGat > 2:3343058/1‑100 (MQ=255) ggTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGat < 1:516/100‑1 (MQ=255) ggTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGat > 1:4110269/1‑100 (MQ=255) ggTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGat > 1:4109838/1‑100 (MQ=255) tAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGatat > 2:3276397/1‑100 (MQ=255) gCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTc > 2:2294478/1‑100 (MQ=255) cGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAg < 2:1744703/100‑1 (MQ=255) gTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAgg < 2:2931665/100‑1 (MQ=255) tGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGc < 2:1367064/100‑1 (MQ=255) tGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGc < 2:3790469/100‑1 (MQ=255) gAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGca < 2:3438644/100‑1 (MQ=255) aGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAg > 2:78037/1‑100 (MQ=255) aGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAg > 1:1802853/1‑100 (MQ=255) ccTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGcc < 1:1005215/100‑1 (MQ=255) ccTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGcc > 1:41424/1‑100 (MQ=255) ccTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGcc > 1:312741/1‑100 (MQ=255) tGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCcgc > 2:2749322/1‑100 (MQ=255) gggCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCcgcg < 2:3115686/100‑1 (MQ=255) ggCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCgcgc < 2:4110562/100‑1 (MQ=255) ggCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCgcgc < 2:4110291/100‑1 (MQ=255) ggCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCgcgc < 2:4109860/100‑1 (MQ=255) gCTGCCCTGAGCGAATTTACCGGTCGTGCCCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCa > 1:340786/1‑100 (MQ=255) cTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCaa > 2:1222632/1‑100 (MQ=255) gcgcTGAGCGGATTTACCGGTCGTGAGCTTACGCATATGGCGCTGGATAAAGAAGACTAGAAGATCCGCCTCCGCGATGTTCATGCACGGCCgcgc > 1:1443202/4‑96 (MQ=255) cccTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAAt < 2:2756233/100‑1 (MQ=255) cccTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAAt > 2:1193860/1‑100 (MQ=255) ccTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAAtt < 2:3562262/100‑1 (MQ=255) ccTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAAtt > 1:1608478/1‑100 (MQ=255) gCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTAtctc > 2:2559227/1‑100 (MQ=255) gCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTAtctc < 2:560906/100‑1 (MQ=255) gAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTcc < 1:2853474/99‑1 (MQ=255) tACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑g > 2:2141903/1‑100 (MQ=255) tACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑g > 2:3649631/1‑100 (MQ=255) tACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑g > 1:3185779/1‑100 (MQ=255) aCCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑Ga > 1:363248/1‑100 (MQ=255) ccGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GAc > 1:522640/1‑100 (MQ=255) cGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GAcc < 2:2621665/100‑1 (MQ=255) cGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GAcc < 2:609818/100‑1 (MQ=255) ggTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACct > 1:889251/1‑100 (MQ=255) ggTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACct > 2:2090239/1‑100 (MQ=255) gTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctg > 2:3463277/1‑100 (MQ=255) gTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctg > 2:4255714/1‑100 (MQ=255) gTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCGTCCGCGATATTCAGGCACAGCCGCGCAAAATTATATCCAG‑CCC‑GACctg < 1:3944091/100‑1 (MQ=255) tCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctgg < 1:3163960/100‑1 (MQ=255) gTGACCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctggtc > 1:72977/1‑100 (MQ=255) tGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctggtct < 1:75615/100‑1 (MQ=255) aCCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctggtctgg < 1:3652120/100‑1 (MQ=255) aCCATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACctggtctgg > 1:3459773/1‑100 (MQ=255) cATACGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCtggtctggtc < 1:3200312/100‑1 (MQ=255) tACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGgtctggtctg < 1:420804/100‑1 (MQ=255) aCGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGtctggtctgg < 1:1276732/100‑1 (MQ=255) cGCATCTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGa > 1:3310009/1‑100 (MQ=255) gCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑ACCAGACcaggtcgggctggag < 2:2691029/100‑10 (MQ=38) aTCTGGCTCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAg < 1:2387710/99‑1 (MQ=255) cTGGCGCTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCACAAG‑CCC‑GACCTGGTCTGGTCTGGAAGAt > 1:1370955/1‑99 (MQ=255) cTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATg < 2:1823693/100‑1 (MQ=255) cTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCCGGTCTGGAAGATg < 2:2873262/100‑1 (MQ=255) tGGCGCTGAATAAAGAAGACTAGGAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGa < 1:3104532/100‑1 (MQ=255) tGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGa < 1:2749186/100‑1 (MQ=255) ggCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAGACCA‑GACCAGGTCGGG‑CTGGagataat < 1:419554/99‑7 (MQ=18) ggCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGaa > 2:2573659/1‑100 (MQ=255) ggCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGaa > 2:715309/1‑100 (MQ=255) gcTGAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCCGGTCTGGAAGATGAacac > 1:3852157/1‑100 (MQ=255) gcTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAacac > 1:1755281/1‑100 (MQ=255) cTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACg < 2:2130430/100‑1 (MQ=255) tGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGt > 1:3485577/1‑100 (MQ=255) gAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGtt > 1:1717984/1‑100 (MQ=255) gAATAAAGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGtt < 2:3852174/100‑1 (MQ=255) aTAAAGAAGACGAGAGGATCCGCTTCCGCTATATTCAGGCACAGCCGCGCAAAATTATCGCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTc < 1:959091/100‑1 (MQ=255) aaaGAAGACTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCtt < 2:1331947/100‑1 (MQ=255) agaagaCTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTAc < 1:3077986/100‑1 (MQ=255) agaagaCGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTAc < 1:4231982/100‑1 (MQ=255) agaagaCGAGAAGATCCGCTTCCGCGATAGTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTAc < 1:2282196/100‑1 (MQ=255) gaagaCTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACa > 2:1683637/1‑100 (MQ=255) gaagaCGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACa < 2:3602297/100‑1 (MQ=255) aagaCTAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACaa < 2:1201632/100‑1 (MQ=255) cGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGcc > 1:2591584/1‑100 (MQ=255) | GCACCGGAAACCAACGGTCAGGTAGCCGTGAAAGCCTGGGCTGCCCTGAGCGAATTTACCGGTCGTGACCATACGCATCTGGCGCTGAATAAAGAAGACGAGAAGATCCGCTTCCGCGATATTCAGGCACAGCCGCGCAAAATTATCTCCAG‑CCC‑GACCTGGTCTGGTCTGGAAGATGAACACGTTTCTTACAACGCC > NC_000913/1282741‑1282938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |