| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,368,184 | A→T | 30.9% | M36L (ATG→TTG) | pspA → | regulatory protein for phage‑shock‑protein operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,368,184 | 0 | A | T | 30.9% | 221.1 / 118.1 | 148 | M36L (ATG→TTG) | pspA | regulatory protein for phage‑shock‑protein operon |
| Reads supporting (aligned to +/- strand): ref base A (54/48); new base T (22/24); total (76/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 152 total aligned reads displayed.
TTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAG > NC_000913/1368086‑1368282 | ttttttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGAt < 2:531758/100‑1 (MQ=255) tttttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATg > 2:1289842/1‑100 (MQ=255) tttttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATg > 2:3148145/1‑100 (MQ=255) tttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGa > 1:6265/1‑100 (MQ=255) ttCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGaa > 2:4096038/1‑100 (MQ=255) ctcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGa > 1:1655293/1‑100 (MQ=255) tcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGAt < 2:788212/100‑1 (MQ=255) tcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGAt < 2:603219/100‑1 (MQ=255) tcGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGAt < 2:3429364/100‑1 (MQ=255) ngCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATa > 2:275349/2‑100 (MQ=255) cTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATaca < 2:2002847/100‑1 (MQ=255) cTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATaca < 1:3327680/100‑1 (MQ=255) ttGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACt < 2:2690074/100‑1 (MQ=255) ttGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACt < 2:4174680/100‑1 (MQ=255) gCCGACATCGTGAATGCCAACATCAACGCCCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTg > 1:3585572/1‑99 (MQ=255) ccGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGt > 2:780131/1‑100 (MQ=255) ccGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGt < 1:433914/100‑1 (MQ=255) ccGACATCGTGAATGCCAACATCAACGCTCGGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGACGGAAGATACACTgg > 1:3489216/1‑99 (MQ=255) cGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGtt < 1:3794503/100‑1 (MQ=255) gACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGACACTGGTTCGTCTGATGATCCAGAAGTTGGAAGATACACTGGTTg > 1:829511/1‑100 (MQ=255) aCATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGa < 2:187452/100‑1 (MQ=255) cATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGaa < 1:2034700/100‑1 (MQ=255) cATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGaa > 2:230881/1‑100 (MQ=255) cATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGaa > 1:2957166/1‑100 (MQ=255) aTCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAg < 1:3424049/100‑1 (MQ=255) cGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTa < 2:3142394/100‑1 (MQ=255) cGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTa > 2:2573601/1‑100 (MQ=255) gTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTAc > 2:3668187/1‑100 (MQ=255) aTGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTc < 1:4154556/100‑1 (MQ=255) aTGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTc < 2:15849/100‑1 (MQ=255) gCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTa < 1:2210435/100‑1 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTAc > 1:952195/1‑100 (MQ=255) ccAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTAc > 2:3124320/1‑100 (MQ=255) cAACATCAACGCTCTGTTAGAGAAAGCGGAAGCTCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACt > 1:741505/1‑100 (MQ=255) cAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACt < 2:1212493/100‑1 (MQ=255) cAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACt < 1:1082533/100‑1 (MQ=255) aaCATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACtt > 1:365112/1‑100 (MQ=255) cATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCg > 1:1020362/1‑100 (MQ=255) aTCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCgg > 1:2420826/1‑100 (MQ=255) tCAACGCTCTGTTAGAGAAAGCGGAAGATCCACCGAAACTGGTTCGTCTGATGCTCCAGGAGTTGGAAGATACGCTAGTTGAAGTACGTTCTACTTCgt < 1:2486324/99‑2 (MQ=255) tCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgc > 2:3801971/1‑100 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg < 1:383873/100‑1 (MQ=255) cAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcg > 2:3887060/1‑100 (MQ=255) aaCGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgc > 1:2291067/1‑100 (MQ=255) aCGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcg > 2:3371395/1‑100 (MQ=255) aCGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcg > 2:141582/1‑100 (MQ=255) gCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcgcg < 1:2757200/100‑1 (MQ=255) ctctGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcgcgc > 1:1631280/1‑100 (MQ=255) ctctGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGgcgcgcgc > 2:3961018/1‑100 (MQ=255) tctGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGcgcgcgcg < 2:220253/100‑1 (MQ=255) cgatctgagaAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGt < 1:2069310/94‑1 (MQ=255) tGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGtt > 2:330076/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 1:3391055/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 2:4101959/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg > 2:3620347/1‑100 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTg < 2:260685/100‑1 (MQ=255) gTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGAGGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGcgcgcgcg > 1:787024/1‑97 (MQ=255) tAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTgg < 1:3069731/99‑1 (MQ=255) agagAAAGCGGAAGATCCACAGAAACTGGTTCGTCCGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCa < 1:502791/100‑1 (MQ=255) gagaAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGtagatcg > 2:2069314/1‑94 (MQ=255) gaACGCGGAATATCCACAGAAATTCGTTCGTCTGATGCTCCAGCAGATGGAAGATACACTGGTTTAAGTACGTTCTTTTTCGGCGCGCGCGTTCGCa < 1:2069093/97‑1 (MQ=255) aaGCGGAAGATCCACAGAAACTGGTTCGTCTGATCATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCCTTGTCagaaaa < 1:2244826/100‑1 (MQ=255) gCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaaga < 1:1065780/100‑1 (MQ=255) gCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaaga < 1:2693413/100‑1 (MQ=255) cGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagaa > 2:3917555/1‑100 (MQ=255) cGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagaa < 2:362646/100‑1 (MQ=255) ggAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagaaa > 1:250864/1‑100 (MQ=255) gaaaGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCagaaaagaaa > 2:3965307/3‑100 (MQ=255) gAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAAc < 2:1701830/100‑1 (MQ=255) gAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAAc < 2:365114/100‑1 (MQ=255) aaGATCCACAGAATCTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAAc < 1:2032365/99‑1 (MQ=255) aaGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACa < 1:4019367/100‑1 (MQ=255) tCCACAGAAGCTGGTTCGGCTGATGATCCAGGAGATGTAAGAGACACTTGTTGAAGTACGTTCTACTGCGGCGCGCGCGTTGGAAGAAAAGAAACAGCTg > 1:2488270/1‑100 (MQ=255) tCCACAGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTg > 1:1468653/1‑100 (MQ=255) tCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTg < 1:1539739/100‑1 (MQ=255) tCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTg < 2:3410107/100‑1 (MQ=255) cacaGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGAc > 1:3918342/1‑100 (MQ=255) cacaGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGAc < 1:2266197/100‑1 (MQ=255) acaGAAACTGGTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGACAGAAAAGAAACAGCTGACt > 1:2757646/1‑100 (MQ=255) aGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTc < 1:3396334/99‑1 (MQ=255) aaCTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCg < 2:2563268/100‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 2:3675453/100‑1 (MQ=255) gTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTg < 1:2376395/100‑1 (MQ=255) ttCGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGa > 1:1785054/1‑100 (MQ=255) tCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGaa < 1:421263/100‑1 (MQ=255) cGTCTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAAc < 1:3329215/100‑1 (MQ=255) cGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAAc < 1:1570919/100‑1 (MQ=255) gTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACa < 2:1012187/100‑1 (MQ=255) cTGATGATCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAg < 1:1213301/100‑1 (MQ=255) tgatgaTCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGc > 1:1506254/1‑100 (MQ=255) tgatgaTCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGc > 2:2865670/1‑100 (MQ=255) gatgatCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCg > 2:85336/1‑100 (MQ=255) gatgatCCAGGACTTGGAAGATACACTGGTTGAAGTACGTCCTACTTCGGCGCGCACGCTGGCAGCAAAGAAACCGCTGACTCGCCGTATTGACCAAGCg > 1:1728052/1‑100 (MQ=255) atgatCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGt > 1:3743565/1‑100 (MQ=255) gatCCAGGAGTTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCg > 2:1917117/1‑100 (MQ=255) atCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCgg > 2:1504437/1‑100 (MQ=255) atCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCgg > 2:2635097/1‑100 (MQ=255) atCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCgg < 1:2717168/100‑1 (MQ=255) cAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGgcgc > 2:2925189/1‑100 (MQ=255) gagaTGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTg < 2:792161/100‑1 (MQ=255) | TTTTTTCTCGCTTTGCCGACATCGTGAATGCCAACATCAACGCTCTGTTAGAGAAAGCGGAAGATCCACAGAAACTGGTTCGTCTGATGATCCAGGAGATGGAAGATACACTGGTTGAAGTACGTTCTACTTCGGCGCGCGCGTTGGCAGAAAAGAAACAGCTGACTCGCCGTATTGAACAAGCGTCGGCGCGTGAG > NC_000913/1368086‑1368282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |