| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,460,438 | T→C | 46.5% | L462S (TTG→TCG) | paaH → | 3‑hydroxyadipyl‑CoA dehydrogenase, NAD+‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,460,438 | 0 | T | C | 46.5% | 21.8 / 212.7 | 157 | L462S (TTG→TCG) | paaH | 3‑hydroxyadipyl‑CoA dehydrogenase, NAD+‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (37/47); new base C (39/34); total (76/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 165 total aligned reads displayed.
CTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGC > NC_000913/1460341‑1460534 | cTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATcgc < 1:156025/100‑1 (MQ=255) tGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATtgctg > 2:772706/1‑100 (MQ=255) gCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATcgctgc < 2:2412355/100‑1 (MQ=255) ccTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTgcg > 1:1714614/1‑100 (MQ=255) cTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTgcgc < 2:3994617/100‑1 (MQ=255) cTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTgcgc > 1:4251294/1‑100 (MQ=255) tGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGcc > 2:3494124/1‑100 (MQ=255) ggggAGCGCAACTTGGCTGGCAGCGCATATTAAGGCTGCTTGAAAATCTACCGCATCACTATGGCGACGAACGCTATCGCCCATGTTCATcgct > 1:1079280/1‑94 (MQ=255) ggggAGCGCAACTTGGCTGGCAGCGAATATTAAGGCACCTTGAAAATCTACAGCATCACTCTGGCGAAGAACGATATCGCCCATGTTCATTGCTGCGCCa > 1:3510214/1‑100 (MQ=255) cgcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGgc < 2:1939466/100‑1 (MQ=255) cgcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGgc > 2:4272238/1‑100 (MQ=255) gcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGgcg < 2:2744286/100‑1 (MQ=255) gcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGgcg < 2:1284427/100‑1 (MQ=255) gcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGgcg < 2:2550111/100‑1 (MQ=255) gcAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGgcg < 1:1322108/100‑1 (MQ=255) cAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGgcgc > 1:229869/1‑100 (MQ=255) cAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGgcgc > 2:799263/1‑100 (MQ=255) aaCTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCt < 1:2944327/100‑1 (MQ=255) ggctggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTgg < 1:4241063/100‑1 (MQ=255) ggctggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTgg < 2:3025348/100‑1 (MQ=255) ggctggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTgg < 2:2041886/100‑1 (MQ=255) ctggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGga > 2:1755209/1‑99 (MQ=255) ggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGgaga < 1:3972799/99‑1 (MQ=255) ggcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGagag > 2:2915120/1‑100 (MQ=255) gcAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGc > 1:447599/1‑100 (MQ=255) cAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCg < 1:2937389/100‑1 (MQ=255) aGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCgg < 2:1010998/100‑1 (MQ=255) aGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCgg < 1:3255467/100‑1 (MQ=255) aGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCgg > 1:662114/1‑100 (MQ=255) aGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCgg < 2:2179695/100‑1 (MQ=255) gAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTa < 2:3313121/100‑1 (MQ=255) aaTATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTAt < 2:1030112/100‑1 (MQ=255) atatTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATg < 1:1112432/100‑1 (MQ=255) atatTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATg < 1:1190657/100‑1 (MQ=255) tgttgaGGCTCCTTGACAACCGACAGCATCACGATGGCGAGGAACGCGCTCGGCCATGTTCATTGCTGCGCCAACGGTCGCTTCTGGAGTTCGGTTa < 1:3597735/92‑1 (MQ=255) tatTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGa > 2:3552752/1‑100 (MQ=255) atTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAATGGGCGCTTCTGGAGAGCGGTTATGAg < 2:2600455/100‑1 (MQ=255) atTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAg < 2:3371847/100‑1 (MQ=255) atTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAg < 2:230412/100‑1 (MQ=255) atTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAg < 2:1992369/100‑1 (MQ=255) atTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAg > 2:3651141/1‑100 (MQ=255) tAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTc < 2:21700/100‑1 (MQ=255) ggCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATa > 1:2420473/1‑100 (MQ=255) tCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTCTGAGTCATAAgg > 1:3365909/1‑100 (MQ=255) tCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAgg < 1:487984/100‑1 (MQ=255) tCCTTGAAAATCTACAGCATCACTATCGCCAAGAACGCTATCGCTCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAgg < 1:1831443/100‑1 (MQ=255) ccTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGc > 1:581691/1‑100 (MQ=255) cTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGcc < 1:1173097/100‑1 (MQ=255) cTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGc > 1:237893/1‑99 (MQ=255) cTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGcc < 2:662116/100‑1 (MQ=255) ttGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCt > 2:4245609/1‑100 (MQ=255) tGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGGGCGGTTATGAGTCATAAGGCCTg > 1:1831079/1‑100 (MQ=255) tGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTg < 1:691538/100‑1 (MQ=255) tGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTg > 2:3796027/1‑100 (MQ=255) tGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTACGAGTCATAAGGcc > 1:3816844/1‑98 (MQ=255) gaaaTCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGc > 1:4084594/2‑100 (MQ=255) aaaaTCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGc > 2:4164445/1‑100 (MQ=255) aaaaTCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTGCATCGCTGCGCCAACAGGAGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTgg > 2:1841171/1‑99 (MQ=255) aaaTCTACAGCATCACGATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGGCATAAGGCCTGGCa < 1:3259634/100‑1 (MQ=255) aaTCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCaa < 1:4208661/100‑1 (MQ=255) tACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATg < 1:1640818/100‑1 (MQ=255) aGCATCACTATGGCGAAGAACGCTATCGCTCATGTTCATTGCTGAACCAACGGGCGCATATGGAGAGCAGTAATAGGTCAAAAGACCTGGCAAAAAGcc < 1:3327225/99‑1 (MQ=255) gCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCa > 1:91202/1‑100 (MQ=255) gCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGccc > 1:2055377/1‑99 (MQ=255) gCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCa > 1:144409/1‑100 (MQ=255) gCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCa > 1:3171675/1‑100 (MQ=255) cATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCAt < 1:2065219/100‑1 (MQ=255) aTCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATg < 2:1683829/100‑1 (MQ=255) aTCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATg < 2:206070/100‑1 (MQ=255) tCACTATGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGc < 2:957368/100‑1 (MQ=255) aCTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCaa > 1:3417245/1‑100 (MQ=255) aTGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGt < 1:2470888/100‑1 (MQ=255) tGGCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTa < 2:2954281/100‑1 (MQ=255) gCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATg < 2:63424/100‑1 (MQ=255) gCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATg > 2:3394954/1‑100 (MQ=255) gCGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATg > 1:1299148/1‑100 (MQ=255) cGAAGAACGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATga > 2:3372296/1‑100 (MQ=255) agaaCGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGaa > 1:1947050/1‑100 (MQ=255) agaaCGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGaa > 1:916909/1‑100 (MQ=255) gaaCGCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAAc < 2:105860/100‑1 (MQ=255) aaCGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACg < 1:716825/100‑1 (MQ=255) aCGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGa > 1:513348/1‑100 (MQ=255) gCTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATg > 2:151690/1‑100 (MQ=255) cTATCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCCGTTATGAGTCATAAGGACTGGCAAAATGCCCTTGCGAGAGATGAGAACggt > 1:2906212/1‑96 (MQ=255) aTCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCt < 2:833267/100‑1 (MQ=255) aTCGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCt > 1:2427897/1‑100 (MQ=255) cGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgc > 1:703005/1‑100 (MQ=255) cGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTAATGAGTCATAAGGCCTGGCATAATGCCCATGCAATGTATGAGAAGGATGCCTg > 1:736216/1‑99 (MQ=255) cGCCCATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgc > 1:2754864/1‑100 (MQ=255) cccATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgcgc > 1:363811/1‑100 (MQ=255) cccATGTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTgcgc < 2:3789658/100‑1 (MQ=255) ccATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGcc < 2:2830466/100‑1 (MQ=255) cATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCa > 1:1626288/1‑100 (MQ=255) tGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCaaa > 1:232935/1‑100 (MQ=255) gTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAg > 2:1408262/1‑100 (MQ=255) gTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAg < 2:3305749/100‑1 (MQ=255) gTTCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAg > 2:2136849/1‑100 (MQ=255) ttCATCGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAg > 2:1334582/1‑99 (MQ=255) tCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAgcg > 2:3208796/1‑100 (MQ=255) cATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAgcgc > 1:2003164/1‑100 (MQ=255) | CTTGCCTGGGGAGCGCAACTTGGCTGGCAGCGAATATTAAGGCTCCTTGAAAATCTACAGCATCACTATGGCGAAGAACGCTATCGCCCATGTTCATTGCTGCGCCAACGGGCGCTTCTGGAGAGCGGTTATGAGTCATAAGGCCTGGCAAAATGCCCATGCAATGTATGAGAACGATGCCTGCGCCAAAGCGC > NC_000913/1460341‑1460534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |