| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,563,518 | (A)5→6 | intergenic (+401/‑74) | yffP → / → yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,563,513 | 1 | . | A | 97.5% | 287.8 / 0.3 | 81 | intergenic (+396/‑79) | yffP/yffQ | CPZ‑55 prophage; uncharacterized protein/CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base A (43/36); total (44/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑AAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATC > NC_000913/2563414‑2563606 | aGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGt < 1:2075682/100‑1 (MQ=255) ggTGAATTTTGTGATGCAGATCGCTTTTTTTTTTTTTTCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a > 2:144617/1‑100 (MQ=255) ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a > 1:511604/1‑100 (MQ=255) ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a < 2:147452/100‑1 (MQ=255) ggTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑a > 1:1279203/1‑100 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCTATTCAGGCATTTTTGTTTATTTCAATAAACGAACGGCCGTTCACAACAACAAAATGAAGATGGGAGGa‑aa > 2:1044220/1‑99 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑aaa > 1:873045/1‑100 (MQ=255) tGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑aaa < 2:2259107/100‑1 (MQ=255) gAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑aaa‑a > 1:754167/1‑100 (MQ=255) ttttGTGATGCAGATCGCTTTTTCCCTTCAGTCCTGTTTGTTTAATTCAATCAACGAAAGAAAGTTCCCAACAACAAAATAAAGATGGGAGGT‑gaa‑aa < 2:2001259/98‑1 (MQ=255) tttGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑aaa‑aaatg < 1:717244/100‑4 (MQ=255) tGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGt > 2:1146690/1‑100 (MQ=255) cAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCATTCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGt > 2:714965/1‑98 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGa > 2:1130309/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGa > 2:1130263/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGa > 1:979862/1‑100 (MQ=255) gATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGa < 2:511602/100‑1 (MQ=255) aTCGATTTTTCCGTTGAGGCATTTTTGTTTAATTCAATCGACGTGAGGAAGTTTCTATCAACACACTCAAGATGGGAGGT‑AAAGATTGCAAAGGTGGGaa > 2:1634976/1‑100 (MQ=255) tCGCTTTTTCTCTTTATTCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAAAAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAg > 2:11137/1‑100 (MQ=255) tCGCTTTTTCCCTTCAGGCATTTTTTTTTTTTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAg > 2:1174923/1‑100 (MQ=255) cGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGt > 1:1469469/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTg < 1:1980515/100‑1 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTg > 2:115184/1‑100 (MQ=255) gCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTg > 2:1987137/1‑100 (MQ=255) tttCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCtt < 2:1680173/100‑1 (MQ=255) cccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTAc < 2:1145550/100‑1 (MQ=255) ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACt < 2:624745/100‑1 (MQ=255) ccTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACt < 1:1444814/100‑1 (MQ=255) ttCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTgg < 1:1222666/100‑1 (MQ=255) tCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGt < 1:1341782/100‑1 (MQ=255) cAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTg < 1:1146692/100‑1 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt > 1:838461/1‑100 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt > 1:1245269/1‑100 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt < 1:208118/100‑1 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt < 2:2259060/100‑1 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGAt > 2:333569/1‑100 (MQ=255) ggCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AAGGAAACGGTGGGAAGTGGCTTTACTGGTGa > 2:758020/1‑99 (MQ=255) gCATTTTTGTTTCATTCAATTAACGAAAGGAAGTTCCCAACAACAAACTACTGATGGGAGGTAAAA‑AATGAAAAGGTGGGAAGTGGCTTTACTGGTGATg > 1:926214/1‑100 (MQ=255) gCATTTTTGTTTAATTCAATCAACGAAAGTCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTg > 1:926206/1‑94 (MQ=255) gCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATg < 2:754166/100‑1 (MQ=255) ttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATg < 1:1130265/100‑1 (MQ=255) ttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATg < 1:1130311/100‑1 (MQ=255) ttGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATg < 1:758021/100‑1 (MQ=255) gTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt > 1:704597/1‑100 (MQ=255) gTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt > 2:1688268/1‑100 (MQ=255) gTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGtt < 2:30990/100‑1 (MQ=255) aaTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt < 1:714627/100‑1 (MQ=255) aaTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt < 2:22165/100‑1 (MQ=255) aaTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtt > 2:698754/1‑100 (MQ=255) aTTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGtat > 1:1211497/1‑98 (MQ=255) ttCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg < 1:508112/100‑1 (MQ=255) ttCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTg > 2:43352/1‑100 (MQ=255) tcaatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 1:714966/100‑1 (MQ=255) tcaatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGc < 1:1174926/100‑1 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 2:1388825/1‑100 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 1:890702/1‑100 (MQ=255) caatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCt > 1:314933/1‑100 (MQ=255) aatcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTg < 2:1934990/100‑1 (MQ=255) atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt > 1:1138804/1‑100 (MQ=255) atcaaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGt > 1:295868/1‑100 (MQ=255) caaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAt < 1:14702/100‑1 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 2:81586/1‑100 (MQ=255) aaCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTAtt > 1:2055085/1‑100 (MQ=255) aCGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTg < 2:248973/100‑1 (MQ=255) ggCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgt > 1:652066/1‑100 (MQ=255) gCAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACtgtg < 1:115186/100‑1 (MQ=255) cAGTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGa < 2:1469465/100‑1 (MQ=255) gTTCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAag > 1:431347/1‑100 (MQ=255) ttCCCAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagg < 1:295304/100‑1 (MQ=255) ttCCCAACAACAAAATAAAGATGGGAGGT‑AAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAagga < 1:1243586/100‑1 (MQ=255) cccAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag < 1:885582/100‑1 (MQ=255) cccAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag > 1:2032117/1‑100 (MQ=255) cccAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggag < 1:724804/100‑1 (MQ=255) ccAACAACAAAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAaggagg > 2:1994196/1‑100 (MQ=255) caacaacaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAggagga > 1:933395/1‑100 (MQ=255) caacaacaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAggagga > 2:271608/1‑100 (MQ=255) caacaacaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGAAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAggagga > 1:1583193/1‑100 (MQ=255) acaacaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACg < 1:43354/100‑1 (MQ=255) aacaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGcc > 1:1278959/1‑100 (MQ=255) acaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa > 2:108112/1‑100 (MQ=255) acaaAATAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGAGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCa > 2:1278975/1‑100 (MQ=255) aaaaTAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATg < 1:122895/100‑1 (MQ=255) tAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc > 1:2050541/1‑100 (MQ=255) tAAAGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAAc < 1:1388828/100‑1 (MQ=255) aaaGATGGGAGGAAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTCTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACt < 2:1247177/100‑1 (MQ=255) aGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACttt < 2:1138802/100‑1 (MQ=255) aGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACttt < 2:295866/100‑1 (MQ=255) aGATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACttt > 1:562847/1‑100 (MQ=255) gATGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACtttt < 1:2054579/100‑1 (MQ=255) aTGGGAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTa > 2:2163884/1‑100 (MQ=255) ggAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATc > 1:495932/1‑100 (MQ=255) ggAGGTAAAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTCGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATc > 1:986692/1‑100 (MQ=255) | AGGTGAATTTTGTGATGCAGATCGCTTTTTCCCTTCAGGCATTTTTGTTTAATTCAATCAACGAAAGGCAGTTCCCAACAACAAAATAAAGATGGGAGGT‑AAA‑AATGAAACGGTGGGAAGTGGCTTTACTGGTGATGGTAATGTTGGTTTGCTGTATTGAACTGTGAAGGAGGACGCCATGAAACTTTTAATC > NC_000913/2563414‑2563606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |